| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652561
Identifier: 148652561
GI number: 148652561
Start: 896651
End: 897385
Strand: Direct
Name: 148652561
Synonym: PsycPRwf_0752
Alternate gene names: NA
Gene position: 896651-897385 (Clockwise)
Preceding gene: 148652555
Following gene: 148652563
Centisome position: 30.1
GC content: 49.39
Gene sequence:
>735_bases ATGAGCAATACTGTGCATACCCAGTCTAACAAAGCGGCTAAAAGCAGTGGCGTACTGTTTAAGCTTTTGTTTTTATTGTT AATTATTTTAATAAGTGTCTTGTTATGGCAGCGGTTTCATCAAGACAGCGCCCCCAAGATTCAGACTGTAAGCCGTGACG GGGTGGTGAGTAAGATTCAACAGCTCAACCGTCTTGAGACCGTGGCTTATAATGTCGATACGGTGATTACCAGTGAGCAG CCAGGCAGTTGGCAACGCTTGTGGCAAGACCAGCAAAAGGGGCTGTTTATCGCGCGTGGCCGAGTGGTGGCGGGTGTGGA TCTGAGCGAGCTTAGCCCAGAGATGGTACAGGTGAGCGATCCAAGTACAGAGCAAATCGCCAAAGCTCAGGCCACTGCCG AGGCACAAGGCAATAGCGATGTGCCCATTACCTTAATGCCCAATATCATGATTACCTTGCCACCGGCTCAGATATTCACC GTGTACTTAGATGACATTGATGTTTATGATTGGAAATCAGGCGGCTTATTCGGCATGATAAAAGCAGAGCCTGAGATTTT GGCACAAGCTCAAGCCAGCGCCAAGGCTGAGGTGCTAAAGCGCGCCTGTGCTGATGGGGTAATGCAGCAAGCTGAAGACA ATGCCAAAAAAGAGATGCAGCAGTTATTTTCTATGACCGGTGCTGATGTTAGTGTGACCACTCAAGGTGCCGGTGCCTGT CAGCCGATGCAGTAG
Upstream 100 bases:
>100_bases GCGTCACTCAAAATGCCTCGAAATACGACATATTATAGCCGTGGCAAAGCCAAATAACATTCAAATAACATCTAAATAAT AACCCTATGAGGGATTCTTT
Downstream 100 bases:
>100_bases TTGACACTTATAACCTTAGTTAGCCACGAGCCTTAAACTGCTCAATGGCATAACGGCGCGCTTGTTTGTGTTCTATCATA GGTAGAGGGTAGTTAACATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MSNTVHTQSNKAAKSSGVLFKLLFLLLIILISVLLWQRFHQDSAPKIQTVSRDGVVSKIQQLNRLETVAYNVDTVITSEQ PGSWQRLWQDQQKGLFIARGRVVAGVDLSELSPEMVQVSDPSTEQIAKAQATAEAQGNSDVPITLMPNIMITLPPAQIFT VYLDDIDVYDWKSGGLFGMIKAEPEILAQAQASAKAEVLKRACADGVMQQAEDNAKKEMQQLFSMTGADVSVTTQGAGAC QPMQ
Sequences:
>Translated_244_residues MSNTVHTQSNKAAKSSGVLFKLLFLLLIILISVLLWQRFHQDSAPKIQTVSRDGVVSKIQQLNRLETVAYNVDTVITSEQ PGSWQRLWQDQQKGLFIARGRVVAGVDLSELSPEMVQVSDPSTEQIAKAQATAEAQGNSDVPITLMPNIMITLPPAQIFT VYLDDIDVYDWKSGGLFGMIKAEPEILAQAQASAKAEVLKRACADGVMQQAEDNAKKEMQQLFSMTGADVSVTTQGAGAC QPMQ >Mature_243_residues SNTVHTQSNKAAKSSGVLFKLLFLLLIILISVLLWQRFHQDSAPKIQTVSRDGVVSKIQQLNRLETVAYNVDTVITSEQP GSWQRLWQDQQKGLFIARGRVVAGVDLSELSPEMVQVSDPSTEQIAKAQATAEAQGNSDVPITLMPNIMITLPPAQIFTV YLDDIDVYDWKSGGLFGMIKAEPEILAQAQASAKAEVLKRACADGVMQQAEDNAKKEMQQLFSMTGADVSVTTQGAGACQ PMQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26623; Mature: 26492
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTVHTQSNKAAKSSGVLFKLLFLLLIILISVLLWQRFHQDSAPKIQTVSRDGVVSKIQ CCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHH QLNRLETVAYNVDTVITSEQPGSWQRLWQDQQKGLFIARGRVVAGVDLSELSPEMVQVSD HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCEEEECCEEEECCCHHHCCCCEEEECC PSTEQIAKAQATAEAQGNSDVPITLMPNIMITLPPAQIFTVYLDDIDVYDWKSGGLFGMI CCHHHHHHHHHHHHCCCCCCCCEEECCCEEEEECCHHEEEEEECCCEEEEECCCCEEEEE KAEPEILAQAQASAKAEVLKRACADGVMQQAEDNAKKEMQQLFSMTGADVSVTTQGAGAC ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC QPMQ CCCC >Mature Secondary Structure SNTVHTQSNKAAKSSGVLFKLLFLLLIILISVLLWQRFHQDSAPKIQTVSRDGVVSKIQ CCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHH QLNRLETVAYNVDTVITSEQPGSWQRLWQDQQKGLFIARGRVVAGVDLSELSPEMVQVSD HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCEEEECCEEEECCCHHHCCCCEEEECC PSTEQIAKAQATAEAQGNSDVPITLMPNIMITLPPAQIFTVYLDDIDVYDWKSGGLFGMI CCHHHHHHHHHHHHCCCCCCCCEEECCCEEEEECCHHEEEEEECCCEEEEECCCCEEEEE KAEPEILAQAQASAKAEVLKRACADGVMQQAEDNAKKEMQQLFSMTGADVSVTTQGAGAC ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC QPMQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA