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The map label for this gene is 148652417

Identifier: 148652417

GI number: 148652417

Start: 727833

End: 728483

Strand: Direct

Name: 148652417

Synonym: PsycPRwf_0605

Alternate gene names: NA

Gene position: 727833-728483 (Clockwise)

Preceding gene: 148652416

Following gene: 148652418

Centisome position: 24.43

GC content: 49.92

Gene sequence:

>651_bases
ATGAAAAAAATCGCGATGTTATCCGCCGCCGCCATTCTTGGTCTTTCAGGTATTTCTTTAAGCCAGGCTGAAGATGCTGC
TCCTGCAGCCGCAGCTGATCAAACCACGCAAGTGGCTGCCGAGACAACCGATGCCGCTGCTGAAGCTTCTGCTGATGCGG
CCACTGACGCAGCTACTACAGACGATGCTGCGGCCACTGATGGCGAAGCCGCTGCCGACGGTGAAGCCGCACCCGCTGCT
CCTGCTGCACCAGAAGAGCCTATTCCACAAGATACACCTCAAGTTAAAAAACTTATCGCCTTATATCCTAAGCTAATTGA
GCGTATCCAGCCTTATGGTAGAGTATGTTTCGATGGCGATGACAGCTGTGATATCACTTTAACCGCTTCAGGTGCCTCTG
CAGATGGTAAGCCACGTGACGGTAAAGCAGTTTATGAATCTATCTGTCAAAACTGCCACGGTAGTGGGGTATTGGGTGCA
CCTAAATTTGGTGATAAAGGCTCATGGGCACCTCACGTAGCTAAAGGTAAAGCCACACTTTATGATCACGCTATGAATGG
CTTCAATGCGATGCCTGCTCGTGGTGGTGCTGATATTCCTGATGAAGAAGTACACAACGCAGTTGACTACATGGTTGAGC
AATCTAGCTAA

Upstream 100 bases:

>100_bases
GTTAAAACAATTCACTCAATCATACACGACGGCCCAGTCAGCCAAGCGCCTATTAGCTGTAGCCACTGAGGCACGTCGCT
CTAAAAAGAGATTGTGACGC

Downstream 100 bases:

>100_bases
TTATTGAACATAAAATTATTGGCTATAAATAGGCTAAATGCATAGCACTTAGCCTACCTAGTTTCTCACAATCATCCCTA
AGACGCTTACTTAACGGTGA

Product: class I cytochrome c

Products: NA

Alternate protein names: Cytochrome c555 [H]

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKKIAMLSAAAILGLSGISLSQAEDAAPAAAADQTTQVAAETTDAAAEASADAATDAATTDDAAATDGEAAADGEAAPAA
PAAPEEPIPQDTPQVKKLIALYPKLIERIQPYGRVCFDGDDSCDITLTASGASADGKPRDGKAVYESICQNCHGSGVLGA
PKFGDKGSWAPHVAKGKATLYDHAMNGFNAMPARGGADIPDEEVHNAVDYMVEQSS

Sequences:

>Translated_216_residues
MKKIAMLSAAAILGLSGISLSQAEDAAPAAAADQTTQVAAETTDAAAEASADAATDAATTDDAAATDGEAAADGEAAPAA
PAAPEEPIPQDTPQVKKLIALYPKLIERIQPYGRVCFDGDDSCDITLTASGASADGKPRDGKAVYESICQNCHGSGVLGA
PKFGDKGSWAPHVAKGKATLYDHAMNGFNAMPARGGADIPDEEVHNAVDYMVEQSS
>Mature_216_residues
MKKIAMLSAAAILGLSGISLSQAEDAAPAAAADQTTQVAAETTDAAAEASADAATDAATTDDAAATDGEAAADGEAAPAA
PAAPEEPIPQDTPQVKKLIALYPKLIERIQPYGRVCFDGDDSCDITLTASGASADGKPRDGKAVYESICQNCHGSGVLGA
PKFGDKGSWAPHVAKGKATLYDHAMNGFNAMPARGGADIPDEEVHNAVDYMVEQSS

Specific function: This basic c-type monoheme cytochrome has been found exclusively in the green photosynthetic bacteria, although its role in bacterial photosynthesis is not established. It has an unusually low redox potential compared with mitochondrial cytochrome c. It i

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002323 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 21860; Mature: 21860

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIAMLSAAAILGLSGISLSQAEDAAPAAAADQTTQVAAETTDAAAEASADAATDAATT
CCHHHHHHHHHHHHCCCCCCCCHHCCCCCHHCCHHHHHHHHHHHHHHHHCCCHHCCCCCC
DDAAATDGEAAADGEAAPAAPAAPEEPIPQDTPQVKKLIALYPKLIERIQPYGRVCFDGD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHCCEEECCC
DSCDITLTASGASADGKPRDGKAVYESICQNCHGSGVLGAPKFGDKGSWAPHVAKGKATL
CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
YDHAMNGFNAMPARGGADIPDEEVHNAVDYMVEQSS
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKIAMLSAAAILGLSGISLSQAEDAAPAAAADQTTQVAAETTDAAAEASADAATDAATT
CCHHHHHHHHHHHHCCCCCCCCHHCCCCCHHCCHHHHHHHHHHHHHHHHCCCHHCCCCCC
DDAAATDGEAAADGEAAPAAPAAPEEPIPQDTPQVKKLIALYPKLIERIQPYGRVCFDGD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHCCEEECCC
DSCDITLTASGASADGKPRDGKAVYESICQNCHGSGVLGAPKFGDKGSWAPHVAKGKATL
CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
YDHAMNGFNAMPARGGADIPDEEVHNAVDYMVEQSS
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]