Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is yggG [H]

Identifier: 148652360

GI number: 148652360

Start: 654873

End: 655679

Strand: Direct

Name: yggG [H]

Synonym: PsycPRwf_0548

Alternate gene names: 148652360

Gene position: 654873-655679 (Clockwise)

Preceding gene: 148652359

Following gene: 148652362

Centisome position: 21.98

GC content: 47.58

Gene sequence:

>807_bases
ATGGCTGTATTTGGCAAACTGAAAATCTCTATCTTAACCGCAACTATGACCACTCTGGTGGGCTGTGCAACCGTCGCTGA
TGTAGCCGGATATAACACGGCAGCACTCAACGAGGATGCAGCAAAAAGCTACAGTCAAGTAGTCTCTAAAGCAAGCAGTC
AAGGGGCAGTGGATAGAACGTCGAGCACAGCCGTGCGAGTTAATAGGGTCTTTAACCGCTTAAGACCTTATGCAGATCGT
GCCAATGCCACAGGTGTTCCTTTTGACTGGCAACTGACAGTCATTCGCTCACCTGAGCTCAATGCTTGGGCAATGCCAGG
CGGTAAGATGGTGGTGTATACCGGTATTGTAGAAAAGCTTAATCTCAATGATGCAGAGATTGCGGCCATTATTGGTCACG
AGATGACGCATGCCTTACAAGAGCACAGCAAAAAAGATGCAGGGCAAAAGATTTTAACCGGATTGGCATTGCAATTAGGG
GGTGCAGCGATACAGTCTAAGACCGGATTAAGCGCAGACTCTATCGGTATGCTCAGTGATTTAGGTATCGACAAGCCATT
TTCTCGCAGTCAAGAGTCACAAGCTGATGCCGGCGGCCTGCATCTAATGGCTCAAGCGGGCTATAACCCAGAGGCAGCCA
TCTCTGTGTGGAAAAAAATGGAGGCGGTAAATGGTCGCAGCAATGCGGTTGTTACCTTAATGTCTACTCACCCAAACTCT
CAGCAGCGTATCAATAAAATACAAGCACTATTGCCTGAAGTGACACCAATTTATCAAGCCGCTGCTAAAGCCCCTAATGG
AAAATAA

Upstream 100 bases:

>100_bases
CATCAACGTTGACTCCTCGGTTTTAAATTTCTTTAAAACCGCTAGTTTTGTAAGGGCCTAGATATTTTCCCCAATAACTT
CTTTTTTATAAGGATATTTT

Downstream 100 bases:

>100_bases
GCAATTTCGGCTCATCGCTATTTAGTCTATAAGTAGGCCGTGCACCAGCTTATAGGTTCATCAAGGCGCTTAATTTGAAG
GATGATACTTCTTATTAAGC

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MAVFGKLKISILTATMTTLVGCATVADVAGYNTAALNEDAAKSYSQVVSKASSQGAVDRTSSTAVRVNRVFNRLRPYADR
ANATGVPFDWQLTVIRSPELNAWAMPGGKMVVYTGIVEKLNLNDAEIAAIIGHEMTHALQEHSKKDAGQKILTGLALQLG
GAAIQSKTGLSADSIGMLSDLGIDKPFSRSQESQADAGGLHLMAQAGYNPEAAISVWKKMEAVNGRSNAVVTLMSTHPNS
QQRINKIQALLPEVTPIYQAAAKAPNGK

Sequences:

>Translated_268_residues
MAVFGKLKISILTATMTTLVGCATVADVAGYNTAALNEDAAKSYSQVVSKASSQGAVDRTSSTAVRVNRVFNRLRPYADR
ANATGVPFDWQLTVIRSPELNAWAMPGGKMVVYTGIVEKLNLNDAEIAAIIGHEMTHALQEHSKKDAGQKILTGLALQLG
GAAIQSKTGLSADSIGMLSDLGIDKPFSRSQESQADAGGLHLMAQAGYNPEAAISVWKKMEAVNGRSNAVVTLMSTHPNS
QQRINKIQALLPEVTPIYQAAAKAPNGK
>Mature_267_residues
AVFGKLKISILTATMTTLVGCATVADVAGYNTAALNEDAAKSYSQVVSKASSQGAVDRTSSTAVRVNRVFNRLRPYADRA
NATGVPFDWQLTVIRSPELNAWAMPGGKMVVYTGIVEKLNLNDAEIAAIIGHEMTHALQEHSKKDAGQKILTGLALQLGG
AAIQSKTGLSADSIGMLSDLGIDKPFSRSQESQADAGGLHLMAQAGYNPEAAISVWKKMEAVNGRSNAVVTLMSTHPNSQ
QRINKIQALLPEVTPIYQAAAKAPNGK

Specific function: Seems to regulate the expression of speB [H]

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M48B family [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=188, Percent_Identity=27.1276595744681, Blast_Score=81, Evalue=1e-15,
Organism=Escherichia coli, GI87082185, Length=170, Percent_Identity=30, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87081800, Length=259, Percent_Identity=25.4826254826255, Blast_Score=72, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6322940, Length=210, Percent_Identity=28.0952380952381, Blast_Score=92, Evalue=6e-20,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 28334; Mature: 28202

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVFGKLKISILTATMTTLVGCATVADVAGYNTAALNEDAAKSYSQVVSKASSQGAVDRT
CCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCC
SSTAVRVNRVFNRLRPYADRANATGVPFDWQLTVIRSPELNAWAMPGGKMVVYTGIVEKL
CHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEEEECCCCCEEECCCCCEEEEECCHHHC
NLNDAEIAAIIGHEMTHALQEHSKKDAGQKILTGLALQLGGAAIQSKTGLSADSIGMLSD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHCCHHHH
LGIDKPFSRSQESQADAGGLHLMAQAGYNPEAAISVWKKMEAVNGRSNAVVTLMSTHPNS
CCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCH
QQRINKIQALLPEVTPIYQAAAKAPNGK
HHHHHHHHHHHCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AVFGKLKISILTATMTTLVGCATVADVAGYNTAALNEDAAKSYSQVVSKASSQGAVDRT
CCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCC
SSTAVRVNRVFNRLRPYADRANATGVPFDWQLTVIRSPELNAWAMPGGKMVVYTGIVEKL
CHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEEEECCCCCEEECCCCCEEEEECCHHHC
NLNDAEIAAIIGHEMTHALQEHSKKDAGQKILTGLALQLGGAAIQSKTGLSADSIGMLSD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHCCHHHH
LGIDKPFSRSQESQADAGGLHLMAQAGYNPEAAISVWKKMEAVNGRSNAVVTLMSTHPNS
CCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCH
QQRINKIQALLPEVTPIYQAAAKAPNGK
HHHHHHHHHHHCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2153656; 9278503; 1310091 [H]