| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652358
Identifier: 148652358
GI number: 148652358
Start: 652557
End: 653894
Strand: Direct
Name: 148652358
Synonym: PsycPRwf_0546
Alternate gene names: NA
Gene position: 652557-653894 (Clockwise)
Preceding gene: 148652357
Following gene: 148652359
Centisome position: 21.91
GC content: 32.74
Gene sequence:
>1338_bases ATGAACTATGTAACAATTAAAACCGAACATCATACAACATTTAGTTTTGAAGATATTAATAAGGTTATCGGTACTCTTAA TCCTTCCAATATCGCTAAACTCTTAGATACTATCGAGTTAACTGCGAACCCCAGAAAATCTAAAATTAATAAGATCACCA ATTCAATTCAAGAGACTCTTGAACTGACACCAGAATACATGGTTTTTAAATCTAAGGGGTTACTTTTATCGACAGGGGAT TGTCAGCCTCTTGAACGGGGTAGGTTCAAGATGAGAGTTGAAGACGATGTTACGGATGGTCTGCTTGATGGTGGGCACAA TATGCTAGCTATCGGTATGTTTTTCCTTAAAAAATATTTTGAGAAGAATGATACTAAAGAGCCTGTTGAGTATCGTCGTA TTAGGCGTTGGGATGATTTCTTAGAGGTATGGTCGAAATATAGAGAAGATATTGGCTCGGTCATAGAAGACTTAGATTTC CTTGTACCTGTGGAGCTGATTTATCCAGCGCAAGGAAGAGAAGATATATTTAGTGATAAGGTTTTTGAAATATCAGATGC TAGAAATAACAATCATGCTCTAACGAGTGGTACAAAGGCAGATCATAAAGGTTATTTTGAAGCGTTAAAGGATGCTCTAG ATCCTATATTAAATGAAGAAGTTGAATGGAAAGATAACGATATTGATAAAACGGTAAAGAGGAATGATATCGTTTCATTA GCACTTATTCCTTTAATTGCTTTGCAACGTAATAATAGATTAGATAAAGATATCAGGAAAATTAATCCTACTCTTATCTA CAATAGTAAAGAAAAATGTGTAGAAACGTATTCACTTCTTATTGAAAAGTATACGAATGAGGACGGGGAGGTAGAATTAC CTCAAGTTGTAGTCAATGCGTTTAAACTAATGAAGGATATACCTAAGTTTTATGATTTGATATATAAGGTTTTTCCAGAT ATATATAATTCTTGTCAAGGTAGCTTTGGCCGAATTTCAAGTGTTTCTCAAAAAAAGGATAAATCTGGTAAAGTTATTAA AGGTGGTTATAAAACAAAGTTTTATAACTATAAATTAGATTATAAATATCCTGATGCATTTATGATTCCAATTATAGTTT CCCTAAATGAGCTTATTAAAATAGATGGGGATGAAGTGACTTGGAAGATTAAAAATATGGAAGGTTTTATCGAAAATAAT TTAAAGCAGCACTGTGGCATGCTTATTAGTACTATAAAAGATAATCATTATGACTCTCAATCTGTAGGTAAAAGTTCTGC TGCGTATAAAGGTATGGAAATGGAGTTAGGCTTAGCTGAAATGAAAATCAATAATTAG
Upstream 100 bases:
>100_bases GCTGAAAAAGCTGAGAAGCCTACGTATATAAATTTAAAGCTTATGATAAATTTTTTCGTAAGGTTTCTCCAATTCTGTTT ATACAATTTGGAGACCTTCC
Downstream 100 bases:
>100_bases TTTTAGGGCTGCAGAATAATAGATTCTAATTATTATAGAAATGAGAGGAGATATCTGATGTTTCAGTTATCTCCTTTTTT ATATATAGAAGGCTCTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MNYVTIKTEHHTTFSFEDINKVIGTLNPSNIAKLLDTIELTANPRKSKINKITNSIQETLELTPEYMVFKSKGLLLSTGD CQPLERGRFKMRVEDDVTDGLLDGGHNMLAIGMFFLKKYFEKNDTKEPVEYRRIRRWDDFLEVWSKYREDIGSVIEDLDF LVPVELIYPAQGREDIFSDKVFEISDARNNNHALTSGTKADHKGYFEALKDALDPILNEEVEWKDNDIDKTVKRNDIVSL ALIPLIALQRNNRLDKDIRKINPTLIYNSKEKCVETYSLLIEKYTNEDGEVELPQVVVNAFKLMKDIPKFYDLIYKVFPD IYNSCQGSFGRISSVSQKKDKSGKVIKGGYKTKFYNYKLDYKYPDAFMIPIIVSLNELIKIDGDEVTWKIKNMEGFIENN LKQHCGMLISTIKDNHYDSQSVGKSSAAYKGMEMELGLAEMKINN
Sequences:
>Translated_445_residues MNYVTIKTEHHTTFSFEDINKVIGTLNPSNIAKLLDTIELTANPRKSKINKITNSIQETLELTPEYMVFKSKGLLLSTGD CQPLERGRFKMRVEDDVTDGLLDGGHNMLAIGMFFLKKYFEKNDTKEPVEYRRIRRWDDFLEVWSKYREDIGSVIEDLDF LVPVELIYPAQGREDIFSDKVFEISDARNNNHALTSGTKADHKGYFEALKDALDPILNEEVEWKDNDIDKTVKRNDIVSL ALIPLIALQRNNRLDKDIRKINPTLIYNSKEKCVETYSLLIEKYTNEDGEVELPQVVVNAFKLMKDIPKFYDLIYKVFPD IYNSCQGSFGRISSVSQKKDKSGKVIKGGYKTKFYNYKLDYKYPDAFMIPIIVSLNELIKIDGDEVTWKIKNMEGFIENN LKQHCGMLISTIKDNHYDSQSVGKSSAAYKGMEMELGLAEMKINN >Mature_445_residues MNYVTIKTEHHTTFSFEDINKVIGTLNPSNIAKLLDTIELTANPRKSKINKITNSIQETLELTPEYMVFKSKGLLLSTGD CQPLERGRFKMRVEDDVTDGLLDGGHNMLAIGMFFLKKYFEKNDTKEPVEYRRIRRWDDFLEVWSKYREDIGSVIEDLDF LVPVELIYPAQGREDIFSDKVFEISDARNNNHALTSGTKADHKGYFEALKDALDPILNEEVEWKDNDIDKTVKRNDIVSL ALIPLIALQRNNRLDKDIRKINPTLIYNSKEKCVETYSLLIEKYTNEDGEVELPQVVVNAFKLMKDIPKFYDLIYKVFPD IYNSCQGSFGRISSVSQKKDKSGKVIKGGYKTKFYNYKLDYKYPDAFMIPIIVSLNELIKIDGDEVTWKIKNMEGFIENN LKQHCGMLISTIKDNHYDSQSVGKSSAAYKGMEMELGLAEMKINN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51272; Mature: 51272
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYVTIKTEHHTTFSFEDINKVIGTLNPSNIAKLLDTIELTANPRKSKINKITNSIQETL CCEEEEEECCCCEECHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ELTPEYMVFKSKGLLLSTGDCQPLERGRFKMRVEDDVTDGLLDGGHNMLAIGMFFLKKYF HCCCHHEEEECCCCEEECCCCCHHHCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHH EKNDTKEPVEYRRIRRWDDFLEVWSKYREDIGSVIEDLDFLVPVELIYPAQGREDIFSDK HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCHHHHCCC VFEISDARNNNHALTSGTKADHKGYFEALKDALDPILNEEVEWKDNDIDKTVKRNDIVSL CEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH ALIPLIALQRNNRLDKDIRKINPTLIYNSKEKCVETYSLLIEKYTNEDGEVELPQVVVNA HHHHHHHHHCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHH FKLMKDIPKFYDLIYKVFPDIYNSCQGSFGRISSVSQKKDKSGKVIKGGYKTKFYNYKLD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEECCCEEEEEEEEEE YKYPDAFMIPIIVSLNELIKIDGDEVTWKIKNMEGFIENNLKQHCGMLISTIKDNHYDSQ CCCCCHHHHHHHHHHHHHHEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCH SVGKSSAAYKGMEMELGLAEMKINN HCCCCHHHHCCCEEECCHHHEEECC >Mature Secondary Structure MNYVTIKTEHHTTFSFEDINKVIGTLNPSNIAKLLDTIELTANPRKSKINKITNSIQETL CCEEEEEECCCCEECHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ELTPEYMVFKSKGLLLSTGDCQPLERGRFKMRVEDDVTDGLLDGGHNMLAIGMFFLKKYF HCCCHHEEEECCCCEEECCCCCHHHCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHH EKNDTKEPVEYRRIRRWDDFLEVWSKYREDIGSVIEDLDFLVPVELIYPAQGREDIFSDK HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCHHHHCCC VFEISDARNNNHALTSGTKADHKGYFEALKDALDPILNEEVEWKDNDIDKTVKRNDIVSL CEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH ALIPLIALQRNNRLDKDIRKINPTLIYNSKEKCVETYSLLIEKYTNEDGEVELPQVVVNA HHHHHHHHHCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHH FKLMKDIPKFYDLIYKVFPDIYNSCQGSFGRISSVSQKKDKSGKVIKGGYKTKFYNYKLD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEECCCEEEEEEEEEE YKYPDAFMIPIIVSLNELIKIDGDEVTWKIKNMEGFIENNLKQHCGMLISTIKDNHYDSQ CCCCCHHHHHHHHHHHHHHEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCH SVGKSSAAYKGMEMELGLAEMKINN HCCCCHHHHCCCEEECCHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA