| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652335
Identifier: 148652335
GI number: 148652335
Start: 625255
End: 625698
Strand: Direct
Name: 148652335
Synonym: PsycPRwf_0523
Alternate gene names: NA
Gene position: 625255-625698 (Clockwise)
Preceding gene: 148652334
Following gene: 148652336
Centisome position: 20.99
GC content: 42.12
Gene sequence:
>444_bases ATGAGTACCTTTGCAAAATCACTTATACTTAGCGCCGGTTTGGCTTTCGCTTTTAGTGCTAGCGCTGCGGACCAATTAAA TAACACTCAGTGGACGACTTATAACGATAAGGGTCAGCCAGATTCTGTATTAAAATTTACCGAATCAAATGGTAAGATTT CTGCAAAAATTGTGAAGTTATTAGACCCACGCGCCCAAGGCAGAACGGTGTGCGATGTATGCCGCGGCAAATTCAAAGAC AAATCTTTAATAGGCGCGACTGTACTTTGGAATTTAAAAGCAGATCCAAACAATCCTAATAAATATGTCGGTGGCAGCGG TATTGAGCCTGAAACAGGCATGACTTTTTCAGGTAAAGGTGAGCTTAAAGGGGATACTTTGGAGCTTAGAGGCTATAAAG GCATATCACTACTGGGCAAAACACGTGTGTTAAAGCGTCGTTAG
Upstream 100 bases:
>100_bases TTATCGTTAGTAGGGTGGTTATTTGTTACACTCTACGCTACGATGAATAAAGTGAGTGTGACTCACTTTGGATTAATTGA ACATAACACAAGGATGTAAT
Downstream 100 bases:
>100_bases TTTTCGCACGTTCACTCTCAATGAGACTCAATGAATGAGAGTAACTGTGTAAAATGCATGAATTGGCTATGAAATGAGGT GATTCATATCCCACCTACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSTFAKSLILSAGLAFAFSASAADQLNNTQWTTYNDKGQPDSVLKFTESNGKISAKIVKLLDPRAQGRTVCDVCRGKFKD KSLIGATVLWNLKADPNNPNKYVGGSGIEPETGMTFSGKGELKGDTLELRGYKGISLLGKTRVLKRR
Sequences:
>Translated_147_residues MSTFAKSLILSAGLAFAFSASAADQLNNTQWTTYNDKGQPDSVLKFTESNGKISAKIVKLLDPRAQGRTVCDVCRGKFKD KSLIGATVLWNLKADPNNPNKYVGGSGIEPETGMTFSGKGELKGDTLELRGYKGISLLGKTRVLKRR >Mature_146_residues STFAKSLILSAGLAFAFSASAADQLNNTQWTTYNDKGQPDSVLKFTESNGKISAKIVKLLDPRAQGRTVCDVCRGKFKDK SLIGATVLWNLKADPNNPNKYVGGSGIEPETGMTFSGKGELKGDTLELRGYKGISLLGKTRVLKRR
Specific function: Unknown
COG id: COG4731
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15888; Mature: 15757
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTFAKSLILSAGLAFAFSASAADQLNNTQWTTYNDKGQPDSVLKFTESNGKISAKIVKL CCHHHHHHHHHHHHHHEECCCCHHHCCCCCCEEECCCCCCCCEEEEECCCCEEEEEEEEH LDPRAQGRTVCDVCRGKFKDKSLIGATVLWNLKADPNNPNKYVGGSGIEPETGMTFSGKG HCCCCCCCCHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCC ELKGDTLELRGYKGISLLGKTRVLKRR CCCCCEEEECCCCCEEECCCHHHHCCC >Mature Secondary Structure STFAKSLILSAGLAFAFSASAADQLNNTQWTTYNDKGQPDSVLKFTESNGKISAKIVKL CHHHHHHHHHHHHHHEECCCCHHHCCCCCCEEECCCCCCCCEEEEECCCCEEEEEEEEH LDPRAQGRTVCDVCRGKFKDKSLIGATVLWNLKADPNNPNKYVGGSGIEPETGMTFSGKG HCCCCCCCCHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCC ELKGDTLELRGYKGISLLGKTRVLKRR CCCCCEEEECCCCCEEECCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA