| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is hisD [H]
Identifier: 148652315
GI number: 148652315
Start: 597669
End: 598961
Strand: Direct
Name: hisD [H]
Synonym: PsycPRwf_0503
Alternate gene names: 148652315
Gene position: 597669-598961 (Clockwise)
Preceding gene: 148652314
Following gene: 148652316
Centisome position: 20.06
GC content: 50.73
Gene sequence:
>1293_bases ATGCGTACTTTGACCAGCACCGACCCCAATTTTGAGCAGCAGCTTACCGACTTGCTTGCCTTTGAAACTGTGAATGATAA AGAGCTACTGGCTACTGTTGATGACATTATCCATCAAGTACGTCATGGGGGTGATGCAGCGGTACTGGCACTGACCCAAA AGTTTGATGCTCACCCTGCAACGAGTATGCAGCAGTTAGTCTTAACACCTGACGCTTTAAAACAAGCTTTTGATCAATTA GATGAGCCGATTAAAGCCGCCCTAAAGACAGCTGCTGAGCGTATTAAAGATTTTCATCAGCGCCAAGTACAGCCAAGCTG GGATTATACCGATGCACTGGGCAACCGTCTGGGACAAAAAGTGACGCCGCTAGATAGAGTGGGTATCTATGTGCCCGGTG GGCTGGCCTCTTATCCCTCGTCAGTACTTATGAATGCGGTACCTGCTAAGGTCGCTGGCGTGGCCGAGGTGATTATGGTG GTGCCAGCGCCAAAGGGCGAGCTGAATCCCTTGGTATTGGCCGCCGCTTATTTATCTGGCGTAGATAAAGTCTTTACCAT TGGCGGCGCGCAAGCAGTAGCGGCGTTGGCTTATGGTACAGATAGCATCGCGCAAGTGGACAAGATTACTGGGCCAGGCA ATAAGTATGTGGCCGCAGCCAAGCGTGCGGTATTCGGTCAAGTGGGCATCGATATGATTGCCGGTCCCTCTGAAGTTTTA GTGTATGCTGAAGGTGAGGCGGCGGACAATGCCGACTGGTTGGCGATGGATCTATTGTCTCAAGCGGAGCACGATACAGT GGCGCAGGCGATTTTTGTGACCACCAGTGAGCAGCAATTAAATGAGGTTGCTACGGCCATTGACAATGCCCTTGAGCAGT TGCCCAAAGCGGATATCGCCCGTGAAGCACTACAAAACCGTGGTGCACTTATTTTGGTCAAAGACCGTGCTGAGGGTCTG GCTTTAATTAATCGTATTGCCCCTGAGCATTTAGAATTGTCACTTGATAAGCCCGATGACGTGCTGGCAGATATTCGTCA TGCTGGCGCCATCTTTATGGGTCGTCACACCCCTGAGGCCATTGGTGATTATTGCGCAGGCCCTAACCATGTGCTGCCGA CTTCTGGTACTGCACGCTTTTCCTCACCGCTTGGGGTGTATGACTTTCAGAAAAAATCCTCTATTATTTACTGCTCAGCT GAAGGCTCAAAGCCACTGGCACAGATAGCAGATACTTTAGCAATGCAAGAGGACTTAGAGGCGCATGCCCGTTCGGCACG TTACCGCAGCTAA
Upstream 100 bases:
>100_bases GTTTTTTTAAGTGTTCTTATATGACTCTGTAAGACACTGATGCTTAGTGCTTAGTAAACATAAGCCCTTTTGGTATAACC TTATTTTTTGAGGATTTTTC
Downstream 100 bases:
>100_bases TTTAACACGCTTATCTGCAGCTTGTAATTCATTGACACCCGTTTGGTGGAATTGGCCTATTTAGCATAGGTACTTATGGT CTTGGCGTCTTGATCAAAAT
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MRTLTSTDPNFEQQLTDLLAFETVNDKELLATVDDIIHQVRHGGDAAVLALTQKFDAHPATSMQQLVLTPDALKQAFDQL DEPIKAALKTAAERIKDFHQRQVQPSWDYTDALGNRLGQKVTPLDRVGIYVPGGLASYPSSVLMNAVPAKVAGVAEVIMV VPAPKGELNPLVLAAAYLSGVDKVFTIGGAQAVAALAYGTDSIAQVDKITGPGNKYVAAAKRAVFGQVGIDMIAGPSEVL VYAEGEAADNADWLAMDLLSQAEHDTVAQAIFVTTSEQQLNEVATAIDNALEQLPKADIAREALQNRGALILVKDRAEGL ALINRIAPEHLELSLDKPDDVLADIRHAGAIFMGRHTPEAIGDYCAGPNHVLPTSGTARFSSPLGVYDFQKKSSIIYCSA EGSKPLAQIADTLAMQEDLEAHARSARYRS
Sequences:
>Translated_430_residues MRTLTSTDPNFEQQLTDLLAFETVNDKELLATVDDIIHQVRHGGDAAVLALTQKFDAHPATSMQQLVLTPDALKQAFDQL DEPIKAALKTAAERIKDFHQRQVQPSWDYTDALGNRLGQKVTPLDRVGIYVPGGLASYPSSVLMNAVPAKVAGVAEVIMV VPAPKGELNPLVLAAAYLSGVDKVFTIGGAQAVAALAYGTDSIAQVDKITGPGNKYVAAAKRAVFGQVGIDMIAGPSEVL VYAEGEAADNADWLAMDLLSQAEHDTVAQAIFVTTSEQQLNEVATAIDNALEQLPKADIAREALQNRGALILVKDRAEGL ALINRIAPEHLELSLDKPDDVLADIRHAGAIFMGRHTPEAIGDYCAGPNHVLPTSGTARFSSPLGVYDFQKKSSIIYCSA EGSKPLAQIADTLAMQEDLEAHARSARYRS >Mature_430_residues MRTLTSTDPNFEQQLTDLLAFETVNDKELLATVDDIIHQVRHGGDAAVLALTQKFDAHPATSMQQLVLTPDALKQAFDQL DEPIKAALKTAAERIKDFHQRQVQPSWDYTDALGNRLGQKVTPLDRVGIYVPGGLASYPSSVLMNAVPAKVAGVAEVIMV VPAPKGELNPLVLAAAYLSGVDKVFTIGGAQAVAALAYGTDSIAQVDKITGPGNKYVAAAKRAVFGQVGIDMIAGPSEVL VYAEGEAADNADWLAMDLLSQAEHDTVAQAIFVTTSEQQLNEVATAIDNALEQLPKADIAREALQNRGALILVKDRAEGL ALINRIAPEHLELSLDKPDDVLADIRHAGAIFMGRHTPEAIGDYCAGPNHVLPTSGTARFSSPLGVYDFQKKSSIIYCSA EGSKPLAQIADTLAMQEDLEAHARSARYRS
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=421, Percent_Identity=40.3800475059382, Blast_Score=281, Evalue=5e-77, Organism=Saccharomyces cerevisiae, GI6319819, Length=411, Percent_Identity=37.956204379562, Blast_Score=256, Evalue=4e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 45967; Mature: 45967
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLTSTDPNFEQQLTDLLAFETVNDKELLATVDDIIHQVRHGGDAAVLALTQKFDAHPA CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCC TSMQQLVLTPDALKQAFDQLDEPIKAALKTAAERIKDFHQRQVQPSWDYTDALGNRLGQK CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC VTPLDRVGIYVPGGLASYPSSVLMNAVPAKVAGVAEVIMVVPAPKGELNPLVLAAAYLSG CCCHHHCCEEECCCHHHCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHC VDKVFTIGGAQAVAALAYGTDSIAQVDKITGPGNKYVAAAKRAVFGQVGIDMIAGPSEVL CHHHEECCCHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHCCCCCEEE VYAEGEAADNADWLAMDLLSQAEHDTVAQAIFVTTSEQQLNEVATAIDNALEQLPKADIA EEECCCCCCCCHHHHHHHHHHCCHHHHHHEEEEECCHHHHHHHHHHHHHHHHHCCHHHHH REALQNRGALILVKDRAEGLALINRIAPEHLELSLDKPDDVLADIRHAGAIFMGRHTPEA HHHHHCCCCEEEEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCEEEECCCCHHH IGDYCAGPNHVLPTSGTARFSSPLGVYDFQKKSSIIYCSAEGSKPLAQIADTLAMQEDLE HHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHH AHARSARYRS HHHHHCCCCC >Mature Secondary Structure MRTLTSTDPNFEQQLTDLLAFETVNDKELLATVDDIIHQVRHGGDAAVLALTQKFDAHPA CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCC TSMQQLVLTPDALKQAFDQLDEPIKAALKTAAERIKDFHQRQVQPSWDYTDALGNRLGQK CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC VTPLDRVGIYVPGGLASYPSSVLMNAVPAKVAGVAEVIMVVPAPKGELNPLVLAAAYLSG CCCHHHCCEEECCCHHHCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHC VDKVFTIGGAQAVAALAYGTDSIAQVDKITGPGNKYVAAAKRAVFGQVGIDMIAGPSEVL CHHHEECCCHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHCCCCCEEE VYAEGEAADNADWLAMDLLSQAEHDTVAQAIFVTTSEQQLNEVATAIDNALEQLPKADIA EEECCCCCCCCHHHHHHHHHHCCHHHHHHEEEEECCHHHHHHHHHHHHHHHHHCCHHHHH REALQNRGALILVKDRAEGLALINRIAPEHLELSLDKPDDVLADIRHAGAIFMGRHTPEA HHHHHCCCCEEEEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCEEEECCCCHHH IGDYCAGPNHVLPTSGTARFSSPLGVYDFQKKSSIIYCSAEGSKPLAQIADTLAMQEDLE HHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHH AHARSARYRS HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA