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The map label for this gene is yraN [C]

Identifier: 148652309

GI number: 148652309

Start: 592160

End: 592588

Strand: Direct

Name: yraN [C]

Synonym: PsycPRwf_0497

Alternate gene names: 148652309

Gene position: 592160-592588 (Clockwise)

Preceding gene: 148652307

Following gene: 148652310

Centisome position: 19.88

GC content: 51.05

Gene sequence:

>429_bases
ATGCCAGCTAACCCCGAATTATTGATTTCGCCAAAACAGCGTCAGGGGGGAGGGTATGAGCAATTGGCCGCTGATTTCTT
GCAGCAGCAAGGGCTACGGCTTATTGCCCGTAACTGGCAGCAGCCCAAAGTAGGTGAGATTGACTTGGTGCTTATTGAAC
ACGGCCGCTCTTGGAATGTCTTAGTATTTGCTGAGGTGCGTAAGCGTAAGCTTTTAGGCTATGGCGACGCACTGGCCAGT
ATCACCCGCAGTAAACAAAAAAAACTGATCAAAACCGCACGCTATTTTTTGCGTCATCATCCTGAATATGCCGATTTTGA
GTGCCGCTTTGATGTGGTGGGGTTTACTGAGCGAACAGGCCGATCCGGCCAAGGGGAGCCGCTACAGTCAGAGTGGCTAC
AAGGGGCATTTTTGGCGCCTGCTTGGTAA

Upstream 100 bases:

>100_bases
CCTTTTGTAAAAGTGAGATATAAAATAAGGAGCCATGCTATCAGTTTACCATGATGTGCTAATATATCCCCTTCATTGCA
CTATAAAAAAAGGGCAGATT

Downstream 100 bases:

>100_bases
AATAGCCAACAGAGGCTACGCTTTTGTTACCAAATGCTCAATGCAGCGTAAGTTATTAGCGGTAAACTAGCAGCTAAACT
TTTTAAAAGCGCACCCCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MPANPELLISPKQRQGGGYEQLAADFLQQQGLRLIARNWQQPKVGEIDLVLIEHGRSWNVLVFAEVRKRKLLGYGDALAS
ITRSKQKKLIKTARYFLRHHPEYADFECRFDVVGFTERTGRSGQGEPLQSEWLQGAFLAPAW

Sequences:

>Translated_142_residues
MPANPELLISPKQRQGGGYEQLAADFLQQQGLRLIARNWQQPKVGEIDLVLIEHGRSWNVLVFAEVRKRKLLGYGDALAS
ITRSKQKKLIKTARYFLRHHPEYADFECRFDVVGFTERTGRSGQGEPLQSEWLQGAFLAPAW
>Mature_141_residues
PANPELLISPKQRQGGGYEQLAADFLQQQGLRLIARNWQQPKVGEIDLVLIEHGRSWNVLVFAEVRKRKLLGYGDALASI
TRSKQKKLIKTARYFLRHHPEYADFECRFDVVGFTERTGRSGQGEPLQSEWLQGAFLAPAW

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=142, Percent_Identity=40.8450704225352, Blast_Score=85, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y497_PSYWF (A5WCR1)

Other databases:

- EMBL:   CP000713
- RefSeq:   YP_001279402.1
- ProteinModelPortal:   A5WCR1
- STRING:   A5WCR1
- GeneID:   5204999
- GenomeReviews:   CP000713_GR
- KEGG:   prw:PsycPRwf_0497
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   EWLQGAF
- ProtClustDB:   PRK14687
- BioCyc:   PSP56811:PSYCPRWF_0497-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 16236; Mature: 16105

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPANPELLISPKQRQGGGYEQLAADFLQQQGLRLIARNWQQPKVGEIDLVLIEHGRSWNV
CCCCCCEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEEEEECCCCCCE
LVFAEVRKRKLLGYGDALASITRSKQKKLIKTARYFLRHHPEYADFECRFDVVGFTERTG
EEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC
RSGQGEPLQSEWLQGAFLAPAW
CCCCCCCCHHHHHCCCCCCCCC
>Mature Secondary Structure 
PANPELLISPKQRQGGGYEQLAADFLQQQGLRLIARNWQQPKVGEIDLVLIEHGRSWNV
CCCCCEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEEEEECCCCCCE
LVFAEVRKRKLLGYGDALASITRSKQKKLIKTARYFLRHHPEYADFECRFDVVGFTERTG
EEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC
RSGQGEPLQSEWLQGAFLAPAW
CCCCCCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA