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The map label for this gene is 148652300

Identifier: 148652300

GI number: 148652300

Start: 581680

End: 582189

Strand: Direct

Name: 148652300

Synonym: PsycPRwf_0488

Alternate gene names: NA

Gene position: 581680-582189 (Clockwise)

Preceding gene: 148652299

Following gene: 148652304

Centisome position: 19.53

GC content: 49.8

Gene sequence:

>510_bases
ATGTCTTTATGTGTTCATTCATCAGCGGGTGCTAAGCGCCTAGCGAGTGCTTTTGGTATTAAAAAATCAGTGGCTTTATT
GGCGATGGCTGGCTTTGTGGCCTTAGGGAGTGGCTGTACGCCGACCCCGCCGGATTACAGGCCGCAAGTTACTGCGCCCG
CTTATCAAGGCGGGGATGCCCAAAAAGGCGAGAAGCTATACGAGGATAACTGTACTCAGTGCCACACCATTCGCCCAGGA
AGCAATAAAAAAGGGCCTCAGTTATTGGGGGTGTATATGGCGCCATCAGCTCAGCTAAAAGACTATAAATACAGTGAAGC
GATGAGCCATGCCAATTGGGTATGGGATGCCAAAACCTTGGACAAATATATTGCCGATCCAGAGGCAGTGCTACCAGACA
CACGTATGCTTTCTGACCCCATGCCAAACACCCAAGATCGACAGGATATTATTGCTTATCTATCGACACTGGGTCATGAT
GCGCCGCCAGTGCCCGAGGAAAAAAAGTAG

Upstream 100 bases:

>100_bases
TGGTACCCAAATTGGTACAAGAGCTACCACACAAGCCCTTTAAAACCCCTGTGGACTTATATCACAGTGACTCTGCCCAT
CTATTTTAAGAGAGCTTTTC

Downstream 100 bases:

>100_bases
CGTTTATCCAAATCTAAACACGGCCACGCCAGATTATGCACGTGGTCAACCCAATGAAACCCGCTCTTGTGGTTGGCTCA
TTCATTATTTAGCCCAGCAG

Product: class I cytochrome c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MSLCVHSSAGAKRLASAFGIKKSVALLAMAGFVALGSGCTPTPPDYRPQVTAPAYQGGDAQKGEKLYEDNCTQCHTIRPG
SNKKGPQLLGVYMAPSAQLKDYKYSEAMSHANWVWDAKTLDKYIADPEAVLPDTRMLSDPMPNTQDRQDIIAYLSTLGHD
APPVPEEKK

Sequences:

>Translated_169_residues
MSLCVHSSAGAKRLASAFGIKKSVALLAMAGFVALGSGCTPTPPDYRPQVTAPAYQGGDAQKGEKLYEDNCTQCHTIRPG
SNKKGPQLLGVYMAPSAQLKDYKYSEAMSHANWVWDAKTLDKYIADPEAVLPDTRMLSDPMPNTQDRQDIIAYLSTLGHD
APPVPEEKK
>Mature_168_residues
SLCVHSSAGAKRLASAFGIKKSVALLAMAGFVALGSGCTPTPPDYRPQVTAPAYQGGDAQKGEKLYEDNCTQCHTIRPGS
NKKGPQLLGVYMAPSAQLKDYKYSEAMSHANWVWDAKTLDKYIADPEAVLPDTRMLSDPMPNTQDRQDIIAYLSTLGHDA
PPVPEEKK

Specific function: Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=98, Percent_Identity=34.6938775510204, Blast_Score=78, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17566554, Length=105, Percent_Identity=34.2857142857143, Blast_Score=81, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17539604, Length=97, Percent_Identity=34.020618556701, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6320796, Length=105, Percent_Identity=35.2380952380952, Blast_Score=85, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6322508, Length=101, Percent_Identity=34.6534653465347, Blast_Score=82, Evalue=4e-17,
Organism=Drosophila melanogaster, GI17137228, Length=100, Percent_Identity=34, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI17137204, Length=100, Percent_Identity=35, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 18284; Mature: 18153

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLCVHSSAGAKRLASAFGIKKSVALLAMAGFVALGSGCTPTPPDYRPQVTAPAYQGGDA
CCEECCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
QKGEKLYEDNCTQCHTIRPGSNKKGPQLLGVYMAPSAQLKDYKYSEAMSHANWVWDAKTL
CCCHHHHHCCCCEEEEECCCCCCCCCEEEEEEECCCCHHCCCHHHHHHHHCCCEECHHHH
DKYIADPEAVLPDTRMLSDPMPNTQDRQDIIAYLSTLGHDAPPVPEEKK
HHHHCCCHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SLCVHSSAGAKRLASAFGIKKSVALLAMAGFVALGSGCTPTPPDYRPQVTAPAYQGGDA
CEECCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
QKGEKLYEDNCTQCHTIRPGSNKKGPQLLGVYMAPSAQLKDYKYSEAMSHANWVWDAKTL
CCCHHHHHCCCCEEEEECCCCCCCCCEEEEEEECCCCHHCCCHHHHHHHHCCCEECHHHH
DKYIADPEAVLPDTRMLSDPMPNTQDRQDIIAYLSTLGHDAPPVPEEKK
HHHHCCCHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 174109 [H]