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The map label for this gene is rng [H]

Identifier: 148652236

GI number: 148652236

Start: 520354

End: 522195

Strand: Direct

Name: rng [H]

Synonym: PsycPRwf_0424

Alternate gene names: 148652236

Gene position: 520354-522195 (Clockwise)

Preceding gene: 148652235

Following gene: 148652237

Centisome position: 17.47

GC content: 47.99

Gene sequence:

>1842_bases
ATGTCAGAAGAGCTACTCATTAATGTCAGCCCAATGGAATCTCGAGTCGCTGTTTTAGATAACGGTGTGGTTAGTGAGGT
TTATATTGAGCGGCATAATAAGCTGGGTCTGGTTGGCAATATCTATTTGGGTACTGTGGTGCGTGTTTTGCCTGGAATGC
AGGCCGCTTTTGTTGAAATTGGCCAGTCTCGTACCGCCTTTTTGCATGTTAATGATATGCGCCGTATTGCCCGTCCTGCC
CCTACGGCAGACAAGGCCCCTGAGATACGTCACAACGCTAAGCAAGAACCGACCGTATTAACCAGTATGCCAGTAGATCG
CTGTGAGCACATTGCTGAAAATGTGGTGACGGCAAGTGACACCATGGCATCTGTAATAGCAGAAACTGAGCCCGCTATGG
AGGCTGACCCGTTGTCTGCGAAGACAGAAATTGAGGCGGGCAGCTTACGCGAAAAAAAATCGGCTTTAGCAGATGAGTCC
GACAATCTAAAAAATGATCTGCTCGATAATGCGCTACTTGAGATTGACTCTCCCGATATGGTGGGTAACGCCATTACCAA
AGCCGATACCAAGCCCGCTGCGGTCAAAGAGCGTCAGATTATCGAGCCGCCACGTCATGAATTAATTCAATATCGGCTGC
ATGAAGGCCAAAAAATACTGGTACAGGTCACCAAAGACCAACTCGGTACCAAAGGCGCCCGTCTTACCACCAATATATCC
TTGCCATCGCGCTATCTGGTATATTTGCCCTCCAGTGAGCACATCGGTATCTCGCAGCGCATCGACAATGAAGAAGAGCG
CCACCGTTTAAAGACTGAGCTTGGCGCACTGATGCAAACGGTCAATCTTACCGGCGGGCTTATTGCTCGTACCGCCGCAG
AGCGGGTACCAGTGGCCAAGCTAGAAGAGGATATCTACTATCTAGTACAGCTATGGCGCACCATTCAAGCGCGTAAAGAA
GCCTCAGCGGGTAGTGGTCAAAGTGCGGTGCTGATTTATCAAGAATTGTCGCTTCCACTGCGCTCTATCCGAGATTTGGT
GCATCCAGATACCGAAAAAGTCATTGTCGATCACGAAGGTATGTACAATGAGGTGCGTCAGTTTGCCAAAGAGTTTGTGC
CTTTTATCTATCCACGTATCCTGCCTTACAGTGGCGAGCAGCCTTTATTTGATGTGCACCGGGTTGAAGAGGATTTGCGT
GATGCGTTAAAGCGCCGAGTAGACTTAAAATCGGGCGGCTACCTGATTATCGATCAAACCGAGGCAATGACCACCATTGA
TGTCAATACCGGCTCTTTTGTGGGTGGACGCTCGCTTGAGGACACGGTATATAAAACTAATTTGGAAGCCACTCATGCTA
TTGCCCGTCAGCTTAGACTGCGTAATTTAGGCGGCATCATCATCCTTGATTTTATTGATATGCTCGAGCAGCAGCACAAA
GATGATGTGTTAGAGAACTTACAATATCAGCTGTCACAAGACTATGCCAAAACCAAAATTACTCAGGTCAGTGAGCTTGG
ACTGGTCGAGATGACCCGCAAGCGCACACGTGAGTCATTAGAGCAGCAGCTTTGTGAGCCATGTAAGACGTGTGAGGGTA
AGGGCTTTATCAAGACAGCAGAAACCGTTTGCTTTGAGATTTTCCGTGAGATCATGCGCTGTGCCCGAACTTATAACTCA
CCTAAGAAGTTTACGGTGGTGGCGCACGCTTCGGTAATTGACTTACTACTCTCATCTGAAGCAGACACAGTCGCTGACTT
AGAGTATCTTTTGGGCCGAGTTATCACGTTTGAGGTGGAGAATTTATATACCCAAGAGCAGTATGATATCGTCTTAGATT
AG

Upstream 100 bases:

>100_bases
TGGTACACTGAGAGTCCTAACGTTTTGAGTGTCCTGAACTTATCAGCGTATCATTCATTTATAGATTGTCATTAACTTAT
AATAAGATAAAAGGTCTGCT

Downstream 100 bases:

>100_bases
TTGCATGCTAAGTGCAGATTATTTTAAGCGGTTGCTGGCTTTTTTAAAGACAAGCTTGATCGTTATAAACTGGTTGTTTT
TTAGACACTTTAGCCCTGCT

Product: ribonuclease

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 613; Mature: 612

Protein sequence:

>613_residues
MSEELLINVSPMESRVAVLDNGVVSEVYIERHNKLGLVGNIYLGTVVRVLPGMQAAFVEIGQSRTAFLHVNDMRRIARPA
PTADKAPEIRHNAKQEPTVLTSMPVDRCEHIAENVVTASDTMASVIAETEPAMEADPLSAKTEIEAGSLREKKSALADES
DNLKNDLLDNALLEIDSPDMVGNAITKADTKPAAVKERQIIEPPRHELIQYRLHEGQKILVQVTKDQLGTKGARLTTNIS
LPSRYLVYLPSSEHIGISQRIDNEEERHRLKTELGALMQTVNLTGGLIARTAAERVPVAKLEEDIYYLVQLWRTIQARKE
ASAGSGQSAVLIYQELSLPLRSIRDLVHPDTEKVIVDHEGMYNEVRQFAKEFVPFIYPRILPYSGEQPLFDVHRVEEDLR
DALKRRVDLKSGGYLIIDQTEAMTTIDVNTGSFVGGRSLEDTVYKTNLEATHAIARQLRLRNLGGIIILDFIDMLEQQHK
DDVLENLQYQLSQDYAKTKITQVSELGLVEMTRKRTRESLEQQLCEPCKTCEGKGFIKTAETVCFEIFREIMRCARTYNS
PKKFTVVAHASVIDLLLSSEADTVADLEYLLGRVITFEVENLYTQEQYDIVLD

Sequences:

>Translated_613_residues
MSEELLINVSPMESRVAVLDNGVVSEVYIERHNKLGLVGNIYLGTVVRVLPGMQAAFVEIGQSRTAFLHVNDMRRIARPA
PTADKAPEIRHNAKQEPTVLTSMPVDRCEHIAENVVTASDTMASVIAETEPAMEADPLSAKTEIEAGSLREKKSALADES
DNLKNDLLDNALLEIDSPDMVGNAITKADTKPAAVKERQIIEPPRHELIQYRLHEGQKILVQVTKDQLGTKGARLTTNIS
LPSRYLVYLPSSEHIGISQRIDNEEERHRLKTELGALMQTVNLTGGLIARTAAERVPVAKLEEDIYYLVQLWRTIQARKE
ASAGSGQSAVLIYQELSLPLRSIRDLVHPDTEKVIVDHEGMYNEVRQFAKEFVPFIYPRILPYSGEQPLFDVHRVEEDLR
DALKRRVDLKSGGYLIIDQTEAMTTIDVNTGSFVGGRSLEDTVYKTNLEATHAIARQLRLRNLGGIIILDFIDMLEQQHK
DDVLENLQYQLSQDYAKTKITQVSELGLVEMTRKRTRESLEQQLCEPCKTCEGKGFIKTAETVCFEIFREIMRCARTYNS
PKKFTVVAHASVIDLLLSSEADTVADLEYLLGRVITFEVENLYTQEQYDIVLD
>Mature_612_residues
SEELLINVSPMESRVAVLDNGVVSEVYIERHNKLGLVGNIYLGTVVRVLPGMQAAFVEIGQSRTAFLHVNDMRRIARPAP
TADKAPEIRHNAKQEPTVLTSMPVDRCEHIAENVVTASDTMASVIAETEPAMEADPLSAKTEIEAGSLREKKSALADESD
NLKNDLLDNALLEIDSPDMVGNAITKADTKPAAVKERQIIEPPRHELIQYRLHEGQKILVQVTKDQLGTKGARLTTNISL
PSRYLVYLPSSEHIGISQRIDNEEERHRLKTELGALMQTVNLTGGLIARTAAERVPVAKLEEDIYYLVQLWRTIQARKEA
SAGSGQSAVLIYQELSLPLRSIRDLVHPDTEKVIVDHEGMYNEVRQFAKEFVPFIYPRILPYSGEQPLFDVHRVEEDLRD
ALKRRVDLKSGGYLIIDQTEAMTTIDVNTGSFVGGRSLEDTVYKTNLEATHAIARQLRLRNLGGIIILDFIDMLEQQHKD
DVLENLQYQLSQDYAKTKITQVSELGLVEMTRKRTRESLEQQLCEPCKTCEGKGFIKTAETVCFEIFREIMRCARTYNSP
KKFTVVAHASVIDLLLSSEADTVADLEYLLGRVITFEVENLYTQEQYDIVLD

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=400, Percent_Identity=49.5, Blast_Score=376, Evalue=1e-105,
Organism=Escherichia coli, GI1787325, Length=378, Percent_Identity=35.978835978836, Blast_Score=222, Evalue=7e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 68926; Mature: 68794

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEELLINVSPMESRVAVLDNGVVSEVYIERHNKLGLVGNIYLGTVVRVLPGMQAAFVEI
CCCCEEEECCCCHHHHHHHCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCHHHHHHH
GQSRTAFLHVNDMRRIARPAPTADKAPEIRHNAKQEPTVLTSMPVDRCEHIAENVVTASD
CCCCEEEEEEHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHH
TMASVIAETEPAMEADPLSAKTEIEAGSLREKKSALADESDNLKNDLLDNALLEIDSPDM
HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCH
VGNAITKADTKPAAVKERQIIEPPRHELIQYRLHEGQKILVQVTKDQLGTKGARLTTNIS
HCCHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEEHHHCCCCCCEEEEEEC
LPSRYLVYLPSSEHIGISQRIDNEEERHRLKTELGALMQTVNLTGGLIARTAAERVPVAK
CCCEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHH
LEEDIYYLVQLWRTIQARKEASAGSGQSAVLIYQELSLPLRSIRDLVHPDTEKVIVDHEG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCHHHHHHHHCCCCCEEEECCCC
MYNEVRQFAKEFVPFIYPRILPYSGEQPLFDVHRVEEDLRDALKRRVDLKSGGYLIIDQT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
EAMTTIDVNTGSFVGGRSLEDTVYKTNLEATHAIARQLRLRNLGGIIILDFIDMLEQQHK
CCEEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
DDVLENLQYQLSQDYAKTKITQVSELGLVEMTRKRTRESLEQQLCEPCKTCEGKGFIKTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
ETVCFEIFREIMRCARTYNSPKKFTVVAHASVIDLLLSSEADTVADLEYLLGRVITFEVE
HHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEHH
NLYTQEQYDIVLD
HHHCCCCCCEECC
>Mature Secondary Structure 
SEELLINVSPMESRVAVLDNGVVSEVYIERHNKLGLVGNIYLGTVVRVLPGMQAAFVEI
CCCEEEECCCCHHHHHHHCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCHHHHHHH
GQSRTAFLHVNDMRRIARPAPTADKAPEIRHNAKQEPTVLTSMPVDRCEHIAENVVTASD
CCCCEEEEEEHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHH
TMASVIAETEPAMEADPLSAKTEIEAGSLREKKSALADESDNLKNDLLDNALLEIDSPDM
HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCH
VGNAITKADTKPAAVKERQIIEPPRHELIQYRLHEGQKILVQVTKDQLGTKGARLTTNIS
HCCHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEEHHHCCCCCCEEEEEEC
LPSRYLVYLPSSEHIGISQRIDNEEERHRLKTELGALMQTVNLTGGLIARTAAERVPVAK
CCCEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHH
LEEDIYYLVQLWRTIQARKEASAGSGQSAVLIYQELSLPLRSIRDLVHPDTEKVIVDHEG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCHHHHHHHHCCCCCEEEECCCC
MYNEVRQFAKEFVPFIYPRILPYSGEQPLFDVHRVEEDLRDALKRRVDLKSGGYLIIDQT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
EAMTTIDVNTGSFVGGRSLEDTVYKTNLEATHAIARQLRLRNLGGIIILDFIDMLEQQHK
CCEEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
DDVLENLQYQLSQDYAKTKITQVSELGLVEMTRKRTRESLEQQLCEPCKTCEGKGFIKTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
ETVCFEIFREIMRCARTYNSPKKFTVVAHASVIDLLLSSEADTVADLEYLLGRVITFEVE
HHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEHH
NLYTQEQYDIVLD
HHHCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]