Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is 148652208

Identifier: 148652208

GI number: 148652208

Start: 481937

End: 482935

Strand: Direct

Name: 148652208

Synonym: PsycPRwf_0396

Alternate gene names: NA

Gene position: 481937-482935 (Clockwise)

Preceding gene: 148652205

Following gene: 148652209

Centisome position: 16.18

GC content: 47.45

Gene sequence:

>999_bases
TTGCGCATAGGCAGTCAATCCAAACAAGCTGCCATAGCTTTGCCTACTAGCTTGGCACTGACCAAAATAATTGAAATGCC
TGCGGAGCTGACAGAAGATGAGATAGAAGCGCAAATTCATATCGATGCCGATCAGCACATTCCTTATCCTTTATCACAAG
TCTGCCTAGATTTTCAGATTCAAGGTCCGGCTGATACTGATGACAGTATGCAGCAGGTACTTTTGGTTGCTGCGCGCTTA
GAGCACGTTGAGCAGCAAGCGGATAGCCTTACCTTTGCACAGTTACAGCCGAAGGTCGTTGATTTGGAGTCACACGCCCA
GATATGCGCTTTTCAATTGGCTTGGGATAATTTATCTGTTCATAAGCCAAACAACTTCACGCCTAACAACTTGACACATA
ACAACTTGACACATAACAACTTGGCGCCAGCTAATACGCCACAGACCGTGGCGCTTATTGATATTGGCGAGAGCCGCACC
ACTTTTTATAGTCACCAATCAGGACAATTGGTCTATCAGTCCCAGCAGCTGTTTGGCGGCGCTCAATTGACTCAGGGCAT
TGCCAATCAGCAGGGTATAGACTTGTCGCAGGCTGTGATAATAAAGCACGATTTAGCGGCATACATCACTTGCCATCAGC
AGCAGGGCAGTGGTCGGCACAAGCATTCTCACAAGTATGCAGATTTGACCAAGGTTTATACGCAGTTTGTCGCTGATTTA
GCGGAGCATATCACCCAAGCTTTTGACGCTTATGCTGCTTTAGCACCGGCAGTCGTCACTGAGCATATTATGCTGTGCGG
CGGTAGTGCACTTTTGCCTGATATCGAGGCGATGCTAAAAGACCAGCTAAGCTGTGAGGTCAGTGTGGCCAATCCATTTG
GACAAATAAAAGTGTCTGATCAAGTCGATAGGGATGAGTTATATGCCGAGGCGCCTAGGCTAATGAGTGCTTGTGGTCTG
GCACTGCGTTGTCAGATGCAAAATCAGGCATATCTGTGA

Upstream 100 bases:

>100_bases
AAAGGTCACACTCAGCTGTTAGGCTATGCCATTAAGACGTTACCACCAGGTGAGGTCATAGACAATCAAATCGTAGACTG
TGAACAGATGGGTGACCATA

Downstream 100 bases:

>100_bases
GCCATATTAATTTATTGCCATGGCGTGCCAAACGGCGTGCTCACCATAACAAGCGCTTTAGACAGATGGTGGTCATAAAC
ATTTTAGCAGCGGTGGTCTG

Product: Tfp pilus assembly protein ATPase PilM-like protein

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilM; Type 4 Fimbrial Biogenesis Protein PilM; Tfp Pilus Assembly Protein ATPase PilM; Fimbrial Assembly Membrane Protein; Tfp Pilus Assembly Protein; Type IV Pilus Assembly Protein; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Type IV Pilus Biogenesis Protein TapM; Tfp Pilus Assembly Protein ATPase PilM-Like Protein; Type 4 Fimbrial Biogenesis Protein; Type Iv Pilus Assembly Protein Pilm; Type IV Fimbrial Biogenesis Protein PilM; PilM Type IV Pilus Assembly Protein; Fimbrial Assembly Protein

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MRIGSQSKQAAIALPTSLALTKIIEMPAELTEDEIEAQIHIDADQHIPYPLSQVCLDFQIQGPADTDDSMQQVLLVAARL
EHVEQQADSLTFAQLQPKVVDLESHAQICAFQLAWDNLSVHKPNNFTPNNLTHNNLTHNNLAPANTPQTVALIDIGESRT
TFYSHQSGQLVYQSQQLFGGAQLTQGIANQQGIDLSQAVIIKHDLAAYITCHQQQGSGRHKHSHKYADLTKVYTQFVADL
AEHITQAFDAYAALAPAVVTEHIMLCGGSALLPDIEAMLKDQLSCEVSVANPFGQIKVSDQVDRDELYAEAPRLMSACGL
ALRCQMQNQAYL

Sequences:

>Translated_332_residues
MRIGSQSKQAAIALPTSLALTKIIEMPAELTEDEIEAQIHIDADQHIPYPLSQVCLDFQIQGPADTDDSMQQVLLVAARL
EHVEQQADSLTFAQLQPKVVDLESHAQICAFQLAWDNLSVHKPNNFTPNNLTHNNLTHNNLAPANTPQTVALIDIGESRT
TFYSHQSGQLVYQSQQLFGGAQLTQGIANQQGIDLSQAVIIKHDLAAYITCHQQQGSGRHKHSHKYADLTKVYTQFVADL
AEHITQAFDAYAALAPAVVTEHIMLCGGSALLPDIEAMLKDQLSCEVSVANPFGQIKVSDQVDRDELYAEAPRLMSACGL
ALRCQMQNQAYL
>Mature_332_residues
MRIGSQSKQAAIALPTSLALTKIIEMPAELTEDEIEAQIHIDADQHIPYPLSQVCLDFQIQGPADTDDSMQQVLLVAARL
EHVEQQADSLTFAQLQPKVVDLESHAQICAFQLAWDNLSVHKPNNFTPNNLTHNNLTHNNLAPANTPQTVALIDIGESRT
TFYSHQSGQLVYQSQQLFGGAQLTQGIANQQGIDLSQAVIIKHDLAAYITCHQQQGSGRHKHSHKYADLTKVYTQFVADL
AEHITQAFDAYAALAPAVVTEHIMLCGGSALLPDIEAMLKDQLSCEVSVANPFGQIKVSDQVDRDELYAEAPRLMSACGL
ALRCQMQNQAYL

Specific function: Unknown

COG id: COG4972

COG function: function code NU; Tfp pilus assembly protein, ATPase PilM

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36446; Mature: 36446

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGSQSKQAAIALPTSLALTKIIEMPAELTEDEIEAQIHIDADQHIPYPLSQVCLDFQI
CCCCCCCCCEEEECCHHHHHHHHHHCCHHCCCCCCEEEEEECCCCCCCCCHHHHEEEEEE
QGPADTDDSMQQVLLVAARLEHVEQQADSLTFAQLQPKVVDLESHAQICAFQLAWDNLSV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEHHHCCCEEEECCCCCCEEEEEEEECCEEE
HKPNNFTPNNLTHNNLTHNNLAPANTPQTVALIDIGESRTTFYSHQSGQLVYQSQQLFGG
ECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCEEEEHHHHHCH
AQLTQGIANQQGIDLSQAVIIKHDLAAYITCHQQQGSGRHKHSHKYADLTKVYTQFVADL
HHHHHHHCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
AEHITQAFDAYAALAPAVVTEHIMLCGGSALLPDIEAMLKDQLSCEVSVANPFGQIKVSD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEECCCCCEEEECC
QVDRDELYAEAPRLMSACGLALRCQMQNQAYL
CCCHHHHHHHHHHHHHHCCHHEEEECCCCCCC
>Mature Secondary Structure
MRIGSQSKQAAIALPTSLALTKIIEMPAELTEDEIEAQIHIDADQHIPYPLSQVCLDFQI
CCCCCCCCCEEEECCHHHHHHHHHHCCHHCCCCCCEEEEEECCCCCCCCCHHHHEEEEEE
QGPADTDDSMQQVLLVAARLEHVEQQADSLTFAQLQPKVVDLESHAQICAFQLAWDNLSV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEHHHCCCEEEECCCCCCEEEEEEEECCEEE
HKPNNFTPNNLTHNNLTHNNLAPANTPQTVALIDIGESRTTFYSHQSGQLVYQSQQLFGG
ECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCEEEEHHHHHCH
AQLTQGIANQQGIDLSQAVIIKHDLAAYITCHQQQGSGRHKHSHKYADLTKVYTQFVADL
HHHHHHHCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
AEHITQAFDAYAALAPAVVTEHIMLCGGSALLPDIEAMLKDQLSCEVSVANPFGQIKVSD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEECCCCCEEEECC
QVDRDELYAEAPRLMSACGLALRCQMQNQAYL
CCCHHHHHHHHHHHHHHCCHHEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA