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The map label for this gene is yhbH [C]

Identifier: 148652165

GI number: 148652165

Start: 427202

End: 427600

Strand: Direct

Name: yhbH [C]

Synonym: PsycPRwf_0353

Alternate gene names: 148652165

Gene position: 427202-427600 (Clockwise)

Preceding gene: 148652164

Following gene: 148652170

Centisome position: 14.34

GC content: 42.61

Gene sequence:

>399_bases
ATGAACATTTCAATTACTGGCCATCACATCACTATTACTGACGCTATGAAAGACATGGTTATGGACAAGCTTTCAAAAGT
TGAACGCCATTTCGATCAAATTCAAAGCATTAAAGTGATTCTTTCGCTGGACAATCATCGTACAGATGCCAGCCACAGTG
GTAAAAATAACCACAAAGCAGAAGCGCTGATGCGGGTAGCGGGTCAAGAAATGTTTGTACAGTCGTATGATGATGATATG
TATAAGGCCATCCATGAAATGGCAGATAAATTAGACCGGCAAGTGCGTAAATATAAAACACGTATTGACCGTAAGACCCG
CTCTTCTAAACGTAGAGAGCGCTTGGTTGCTAGCCTACCGATAGTAGAGCCCGCCGCCGAAGAGTCTTTTGCTTATTAG

Upstream 100 bases:

>100_bases
AAATGCCATTTACTAAAAAAAATGCCATTGAATCGGTCATTATAAAAAAGTCTCCTTGAGTCAGCGGTAGCTGCTCAAAT
CAAAAAAGGATGTAAGCATT

Downstream 100 bases:

>100_bases
GTTCTAGCTTAGGGTGATAGCTTAGGATTATTTGATAACCTTAAGCTTGATAACCTTAAGACTGATACCCCTAAAAGCGG
TTAAAAAAGCAAAAATAGGT

Product: sigma 54 modulation protein/ribosomal protein S30EA

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MNISITGHHITITDAMKDMVMDKLSKVERHFDQIQSIKVILSLDNHRTDASHSGKNNHKAEALMRVAGQEMFVQSYDDDM
YKAIHEMADKLDRQVRKYKTRIDRKTRSSKRRERLVASLPIVEPAAEESFAY

Sequences:

>Translated_132_residues
MNISITGHHITITDAMKDMVMDKLSKVERHFDQIQSIKVILSLDNHRTDASHSGKNNHKAEALMRVAGQEMFVQSYDDDM
YKAIHEMADKLDRQVRKYKTRIDRKTRSSKRRERLVASLPIVEPAAEESFAY
>Mature_132_residues
MNISITGHHITITDAMKDMVMDKLSKVERHFDQIQSIKVILSLDNHRTDASHSGKNNHKAEALMRVAGQEMFVQSYDDDM
YKAIHEMADKLDRQVRKYKTRIDRKTRSSKRRERLVASLPIVEPAAEESFAY

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=102, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 15318; Mature: 15318

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISITGHHITITDAMKDMVMDKLSKVERHFDQIQSIKVILSLDNHRTDASHSGKNNHKA
CCCEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
EALMRVAGQEMFVQSYDDDMYKAIHEMADKLDRQVRKYKTRIDRKTRSSKRRERLVASLP
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IVEPAAEESFAY
CCCCCCCCCCCC
>Mature Secondary Structure
MNISITGHHITITDAMKDMVMDKLSKVERHFDQIQSIKVILSLDNHRTDASHSGKNNHKA
CCCEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
EALMRVAGQEMFVQSYDDDMYKAIHEMADKLDRQVRKYKTRIDRKTRSSKRRERLVASLP
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IVEPAAEESFAY
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8206826 [H]