| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148643855
Identifier: 148643855
GI number: 148643855
Start: 1851535
End: 1852755
Strand: Reverse
Name: 148643855
Synonym: Msm_1795
Alternate gene names: NA
Gene position: 1852755-1851535 (Counterclockwise)
Preceding gene: NA
Following gene: 148643850
Centisome position: 99.98
GC content: 23.67
Gene sequence:
>1221_bases ATGATTTTTATGATAAAAAGAGAATTATATTTATCAAAAATACGTAAATTCATTGATAAAGAAGAAATTAAAGCTATAAC TGGAGTTAGAAGATGTGGTAAAACTTGTTTACTTAAACAAATTATTGATGAACTTGAAAAACGTGGGGTAAATAATGAAA ACATTCTATATGTATCATTAGAATCATCTAAATACGACAACATTAAAGATTATGTGGATCTAAATGAATATATATTTAAA CAAACTGAAAATCTCAAAGGAAAAATATATTTACTTTTTGATGAAATCCAATTAGTTTCCAATTGGGAAAAAAGTATTAA TGCATATAGAATTGATTTAAATTGTGATATTTACATTACAGGTTCAAATTCCAAATTATTATCTGGAGAATTAGCTACTT TAATTTCTGGCAGATATATCAAAATAGACCTATATCCATTTTCATTTAATGAAATATTGGAATATTACAAAGTAACTAAT GGAAATTTAACAAAAGATAATGAAAAATCAATATTTAATAAATATCTTAAATATGGGGGCCTTCCAAGAGTTCTTGATTT TGATGATGATGAAAAAATAGATTATTTAACAGATATCTATAGTACTATTGTTCTTAAAGATATAATTTATAGAAATAATA TGCGAAATATTGGTTTTTTAGAAAGGCTAATAAAATTTTTAATAACAAACACAGGTCAGATATTTTCTGTTAACTCTATT AAAAAGTATTTGAAGCATGAAAATATAAATGTATCAACAAATACCATCAGTACATACTTAAAACATATTACTGAAGCTTA TATTTTATTAAAAGCACAAAGAGAAGAAATAAAAACAAAAAAACTTCTTAGTGTTAATGAAAAATATTATTGTATTGATC CGGGATTTTATCAATTACAGGCTGGAGTTAATAAGTCAAGAGGGCAAATATTGGAAAATGTAGTATTTTTAGAGTTAATC AGAAGAGAATATCGGGTTACTGTTGGAAATATTGGAAAACAAGAAATTGATTTTATATGTAGAAAACATGATAAAACTAT TTATATTCAAGTATCAGAGTCAATTTTAGATGAAAATACACGTGAAAGAGAATTTAATCCTTTAGAGAAAATATCTGACA ATTATCCCAAATATGTATTAACATTAGATGACTGGGACTACTCTAAAAATGGAATAACTCATTTAAATGTAATTGATTTT TTAAAAAATGAAAATATATGA
Upstream 100 bases:
>100_bases ATATAATGAATAAAAATTATTATTTTATTAATTTTGTTCATTATACAATTTAAAATTAGAAAAATTTATTATTAATTAAA AATATAAATAATATCACGAG
Downstream 100 bases:
>100_bases AAATTGAATCTTTTGTATTAATAATGTATTAAAAACAAACTTGAATCTGTTGAAAATTGAACAACTATATATTATAATCA AAATACCGGAACCTATACAA
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MIFMIKRELYLSKIRKFIDKEEIKAITGVRRCGKTCLLKQIIDELEKRGVNNENILYVSLESSKYDNIKDYVDLNEYIFK QTENLKGKIYLLFDEIQLVSNWEKSINAYRIDLNCDIYITGSNSKLLSGELATLISGRYIKIDLYPFSFNEILEYYKVTN GNLTKDNEKSIFNKYLKYGGLPRVLDFDDDEKIDYLTDIYSTIVLKDIIYRNNMRNIGFLERLIKFLITNTGQIFSVNSI KKYLKHENINVSTNTISTYLKHITEAYILLKAQREEIKTKKLLSVNEKYYCIDPGFYQLQAGVNKSRGQILENVVFLELI RREYRVTVGNIGKQEIDFICRKHDKTIYIQVSESILDENTREREFNPLEKISDNYPKYVLTLDDWDYSKNGITHLNVIDF LKNENI
Sequences:
>Translated_406_residues MIFMIKRELYLSKIRKFIDKEEIKAITGVRRCGKTCLLKQIIDELEKRGVNNENILYVSLESSKYDNIKDYVDLNEYIFK QTENLKGKIYLLFDEIQLVSNWEKSINAYRIDLNCDIYITGSNSKLLSGELATLISGRYIKIDLYPFSFNEILEYYKVTN GNLTKDNEKSIFNKYLKYGGLPRVLDFDDDEKIDYLTDIYSTIVLKDIIYRNNMRNIGFLERLIKFLITNTGQIFSVNSI KKYLKHENINVSTNTISTYLKHITEAYILLKAQREEIKTKKLLSVNEKYYCIDPGFYQLQAGVNKSRGQILENVVFLELI RREYRVTVGNIGKQEIDFICRKHDKTIYIQVSESILDENTREREFNPLEKISDNYPKYVLTLDDWDYSKNGITHLNVIDF LKNENI >Mature_406_residues MIFMIKRELYLSKIRKFIDKEEIKAITGVRRCGKTCLLKQIIDELEKRGVNNENILYVSLESSKYDNIKDYVDLNEYIFK QTENLKGKIYLLFDEIQLVSNWEKSINAYRIDLNCDIYITGSNSKLLSGELATLISGRYIKIDLYPFSFNEILEYYKVTN GNLTKDNEKSIFNKYLKYGGLPRVLDFDDDEKIDYLTDIYSTIVLKDIIYRNNMRNIGFLERLIKFLITNTGQIFSVNSI KKYLKHENINVSTNTISTYLKHITEAYILLKAQREEIKTKKLLSVNEKYYCIDPGFYQLQAGVNKSRGQILENVVFLELI RREYRVTVGNIGKQEIDFICRKHDKTIYIQVSESILDENTREREFNPLEKISDNYPKYVLTLDDWDYSKNGITHLNVIDF LKNENI
Specific function: Unknown
COG id: COG1373
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1544 and MJ1637 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47866; Mature: 47866
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFMIKRELYLSKIRKFIDKEEIKAITGVRRCGKTCLLKQIIDELEKRGVNNENILYVSL CEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE ESSKYDNIKDYVDLNEYIFKQTENLKGKIYLLFDEIQLVSNWEKSINAYRIDLNCDIYIT CCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHCCEEEEEEEEEEEEEE GSNSKLLSGELATLISGRYIKIDLYPFSFNEILEYYKVTNGNLTKDNEKSIFNKYLKYGG CCCCCEECCHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC LPRVLDFDDDEKIDYLTDIYSTIVLKDIIYRNNMRNIGFLERLIKFLITNTGQIFSVNSI CCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEHHHH KKYLKHENINVSTNTISTYLKHITEAYILLKAQREEIKTKKLLSVNEKYYCIDPGFYQLQ HHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEE AGVNKSRGQILENVVFLELIRREYRVTVGNIGKQEIDFICRKHDKTIYIQVSESILDENT CCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCEEEEEEEHHHHCCCC REREFNPLEKISDNYPKYVLTLDDWDYSKNGITHLNVIDFLKNENI CCCCCCCHHHHCCCCCEEEEEEECCCCCCCCCEEHHHHHHHCCCCC >Mature Secondary Structure MIFMIKRELYLSKIRKFIDKEEIKAITGVRRCGKTCLLKQIIDELEKRGVNNENILYVSL CEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE ESSKYDNIKDYVDLNEYIFKQTENLKGKIYLLFDEIQLVSNWEKSINAYRIDLNCDIYIT CCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHCCEEEEEEEEEEEEEE GSNSKLLSGELATLISGRYIKIDLYPFSFNEILEYYKVTNGNLTKDNEKSIFNKYLKYGG CCCCCEECCHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC LPRVLDFDDDEKIDYLTDIYSTIVLKDIIYRNNMRNIGFLERLIKFLITNTGQIFSVNSI CCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEHHHH KKYLKHENINVSTNTISTYLKHITEAYILLKAQREEIKTKKLLSVNEKYYCIDPGFYQLQ HHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEE AGVNKSRGQILENVVFLELIRREYRVTVGNIGKQEIDFICRKHDKTIYIQVSESILDENT CCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCEEEEEEEHHHHCCCC REREFNPLEKISDNYPKYVLTLDDWDYSKNGITHLNVIDFLKNENI CCCCCCCHHHHCCCCCEEEEEEECCCCCCCCCEEHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]