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The map label for this gene is csbB [H]

Identifier: 148643687

GI number: 148643687

Start: 1684914

End: 1685825

Strand: Reverse

Name: csbB [H]

Synonym: Msm_1627

Alternate gene names: 148643687

Gene position: 1685825-1684914 (Counterclockwise)

Preceding gene: 148643698

Following gene: 148643677

Centisome position: 90.97

GC content: 30.04

Gene sequence:

>912_bases
ATGAAAACATTGGATATAGTTGTTCCGTGTTATAATGAAGAGGAAATGCTTCCAATATTTTACAGGGAACTTTCAAATAA
TCTGAAAAATATAAACTGGAATGTTATTTTTATAAATGACGGATCAAATGACAACACTTTAGAAGTTATCAAAAAACTTA
AAAACAGCTATGGCAATGTTAAATACATCTCATTTTCAAGAAACTTCGGTAAAGAATCTGCAATATATGCAGGATTAGAC
TATTCTACCGGAGATTACATCGTATTAATGGATGCTGATTTACAAGACCCTCCATCATTAATTCCAGAAATGCTAAAATA
TATTTCTAAATATGATATTGTAGGAACACGTAGAGTCACAAGAAAAGGAGAACCTCCAATCAGATCATTTTTTGCAAGAT
TATTCTATAAAATAGCTAATAAAATAACTAAAATAGAGCTTGTTGATGGTGCAAGAGATTTCAGATTAATGAAAAGAGAA
GTTGTAAATGCAATCCTTGATTTGAAAGAGTATAACCGTTTTTCAAAAGGAATTTTCCAGTGGGTCGGATTTGAAACAAA
ATGGTTAGAATATGAAAACATTGAAAGGCAAAAAGGAGAAACCAGCTGGTCATTTTGGGAACTGTTCAAATATTCCATTG
AAGGAATTGTTTCTTTTACAACAGCTCCTCTTCACATAGCTACAATTATAGGAATTTTCTTTTCAATTATTGCATTTCTA
TCCATTATAGTCATTGTTATAAAAACCCTTTTATTTGGAGATCCTGTAGAAGGTTGGCCTTCAACTATTTCAATTATCCT
ATTTTTAAGTGGAATTCAACTGTTTGCAGCAGGAATAATTGGAGAATATTTAGCTAAAATTTATTTGGAAAGCAAAAAAA
GACCTCTTTATATTATAAAAGAAAAAGATTAG

Upstream 100 bases:

>100_bases
GTATAACCTTACTTATAAATATTTATTATTTAAAAATCAAAAAAAAATTAAAAGTTGATAATAAATTATTTAAAATAGTA
ATATTAAAAAAATATTTAAT

Downstream 100 bases:

>100_bases
TAAGGAGAATCTTTTTCTATAACCGATTTACTTATTTTTTCATGAGCTTTTGGACGAAGCTGTGAAGATTTTCTCATTTT
TTCAATTATGTCATTTGTAG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MKTLDIVVPCYNEEEMLPIFYRELSNNLKNINWNVIFINDGSNDNTLEVIKKLKNSYGNVKYISFSRNFGKESAIYAGLD
YSTGDYIVLMDADLQDPPSLIPEMLKYISKYDIVGTRRVTRKGEPPIRSFFARLFYKIANKITKIELVDGARDFRLMKRE
VVNAILDLKEYNRFSKGIFQWVGFETKWLEYENIERQKGETSWSFWELFKYSIEGIVSFTTAPLHIATIIGIFFSIIAFL
SIIVIVIKTLLFGDPVEGWPSTISIILFLSGIQLFAAGIIGEYLAKIYLESKKRPLYIIKEKD

Sequences:

>Translated_303_residues
MKTLDIVVPCYNEEEMLPIFYRELSNNLKNINWNVIFINDGSNDNTLEVIKKLKNSYGNVKYISFSRNFGKESAIYAGLD
YSTGDYIVLMDADLQDPPSLIPEMLKYISKYDIVGTRRVTRKGEPPIRSFFARLFYKIANKITKIELVDGARDFRLMKRE
VVNAILDLKEYNRFSKGIFQWVGFETKWLEYENIERQKGETSWSFWELFKYSIEGIVSFTTAPLHIATIIGIFFSIIAFL
SIIVIVIKTLLFGDPVEGWPSTISIILFLSGIQLFAAGIIGEYLAKIYLESKKRPLYIIKEKD
>Mature_303_residues
MKTLDIVVPCYNEEEMLPIFYRELSNNLKNINWNVIFINDGSNDNTLEVIKKLKNSYGNVKYISFSRNFGKESAIYAGLD
YSTGDYIVLMDADLQDPPSLIPEMLKYISKYDIVGTRRVTRKGEPPIRSFFARLFYKIANKITKIELVDGARDFRLMKRE
VVNAILDLKEYNRFSKGIFQWVGFETKWLEYENIERQKGETSWSFWELFKYSIEGIVSFTTAPLHIATIIGIFFSIIAFL
SIIVIVIKTLLFGDPVEGWPSTISIILFLSGIQLFAAGIIGEYLAKIYLESKKRPLYIIKEKD

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=172, Percent_Identity=32.5581395348837, Blast_Score=84, Evalue=1e-16,
Organism=Escherichia coli, GI1788692, Length=300, Percent_Identity=43.6666666666667, Blast_Score=249, Evalue=2e-67,
Organism=Escherichia coli, GI1788588, Length=309, Percent_Identity=29.126213592233, Blast_Score=155, Evalue=2e-39,
Organism=Escherichia coli, GI1786560, Length=97, Percent_Identity=38.1443298969072, Blast_Score=68, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71999402, Length=169, Percent_Identity=34.9112426035503, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24585265, Length=171, Percent_Identity=35.0877192982456, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 35054; Mature: 35054

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLDIVVPCYNEEEMLPIFYRELSNNLKNINWNVIFINDGSNDNTLEVIKKLKNSYGNV
CCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCE
KYISFSRNFGKESAIYAGLDYSTGDYIVLMDADLQDPPSLIPEMLKYISKYDIVGTRRVT
EEEEEECCCCCCCCEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHC
RKGEPPIRSFFARLFYKIANKITKIELVDGARDFRLMKREVVNAILDLKEYNRFSKGIFQ
CCCCCCHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVGFETKWLEYENIERQKGETSWSFWELFKYSIEGIVSFTTAPLHIATIIGIFFSIIAFL
HHCCCEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
SIIVIVIKTLLFGDPVEGWPSTISIILFLSGIQLFAAGIIGEYLAKIYLESKKRPLYIIK
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
EKD
CCC
>Mature Secondary Structure
MKTLDIVVPCYNEEEMLPIFYRELSNNLKNINWNVIFINDGSNDNTLEVIKKLKNSYGNV
CCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCE
KYISFSRNFGKESAIYAGLDYSTGDYIVLMDADLQDPPSLIPEMLKYISKYDIVGTRRVT
EEEEEECCCCCCCCEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHC
RKGEPPIRSFFARLFYKIANKITKIELVDGARDFRLMKREVVNAILDLKEYNRFSKGIFQ
CCCCCCHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVGFETKWLEYENIERQKGETSWSFWELFKYSIEGIVSFTTAPLHIATIIGIFFSIIAFL
HHCCCEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
SIIVIVIKTLLFGDPVEGWPSTISIILFLSGIQLFAAGIIGEYLAKIYLESKKRPLYIIK
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
EKD
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]