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The map label for this gene is ydeM [C]

Identifier: 148643666

GI number: 148643666

Start: 1668232

End: 1669362

Strand: Reverse

Name: ydeM [C]

Synonym: Msm_1606

Alternate gene names: 148643666

Gene position: 1669362-1668232 (Counterclockwise)

Preceding gene: 148643667

Following gene: 148643661

Centisome position: 90.08

GC content: 34.22

Gene sequence:

>1131_bases
ATGACTTTTCATGTAATGATAATTCCCACTTTAGGTTGCCAATGCAACTGCAAATACTGTTGGGGTTCAGAATCAACAAA
AGAAATGATGGACATTAGCGTAATTGATGACATTATCACATGGTTAAAAGATTTCAGAGATGATAAAGTTCATTTTACAT
TCCACGGAGGAGAACCTCTTCTTGCAGGCTATGATTTCTATGCTGAAGCTTTAGAAAAATTATCCAAAATAGACAATTTA
GAAGGTTTTTCACTTCAAAGTAATATCTGGTTACTTTCAGATGAACTAATCGATTTATTTTTAAAGTACAATGTTGCTGT
AAGTACCAGTATTGACGGACCTGAAGAAATTAATGACTATCAAAGAGCAGAAGGTTACTTTAAAAAAACCATTGGCAGAT
ATGAAAGAGCAAAAGAAAAAGGATTAAACATAAACTTTGTTTTAACAGTAACTCAATATTCCAAAGACTACAGTGACGAG
TTATATGAATTTTTCAAATCCCATGGTATGAATTTAAAAATACATGCTGCACTTCCGTCACTACGTGGAGACAATGCTGA
CCCATGGGCTCTTGATCAGGAAGAACACGGAAAACTTTTAATAGACTGGCTAGACAAGTATCTTTATGATTTAGATAAAT
TCAGTGTAATGGATCTTGACCACATTGCTAAAAGTACATTCAGAAGAAGGGGAACATTATGTACGTTTGCAGATTGTATA
GGTACAACATTAGCTGTCGGTGCAGACGGTTCAATTTATCCATGCTACAGGTTTGTAGGAATGGATGAATATATTTTAGG
CAATGTCAAAGCAAACCCAAGTTTTGATAAGCTAAAAGAGTCTGACGCATGGGCAAAACTTCAAGAATTTAGAGAATATG
TTGATGAAAACTGTGCCAAATGCAGATATGTAAAATATTGCGAAGGCGGATGTCCATATAATGCTATTGTAGCCAGTAAA
ACTCCAAAAGCTGTTGATCCTCAATGTAAGGCTTATAAAATGATTTTTGGTGAAGTTTCTAAAAGACTTAACAAGGAATT
TGCAAAAAATGCATTTGGCGGATTAAACGGACCAGGCATTAAAAAAGAAAATGAAGCTTTCAGTATTATGGATTTGATGA
TGAAACCATAA

Upstream 100 bases:

>100_bases
AAATGCGAAGATTGCGGTTATATTTTCTTTGTAAATGATAGTATGGAAGAAGACGAAAAAAAAGAACTTTTAAAAGAATT
AAATAAATATTACGGATAAA

Downstream 100 bases:

>100_bases
TATTTTTTTTATTTTAATTTTATTTATATAATAAATCATGTTTTTTTAGAATTAATATTGCCAACTACCTTACAATCAGT
TAATTCTTCAATCACACAGA

Product: arylsulfatase regulator, AslB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MTFHVMIIPTLGCQCNCKYCWGSESTKEMMDISVIDDIITWLKDFRDDKVHFTFHGGEPLLAGYDFYAEALEKLSKIDNL
EGFSLQSNIWLLSDELIDLFLKYNVAVSTSIDGPEEINDYQRAEGYFKKTIGRYERAKEKGLNINFVLTVTQYSKDYSDE
LYEFFKSHGMNLKIHAALPSLRGDNADPWALDQEEHGKLLIDWLDKYLYDLDKFSVMDLDHIAKSTFRRRGTLCTFADCI
GTTLAVGADGSIYPCYRFVGMDEYILGNVKANPSFDKLKESDAWAKLQEFREYVDENCAKCRYVKYCEGGCPYNAIVASK
TPKAVDPQCKAYKMIFGEVSKRLNKEFAKNAFGGLNGPGIKKENEAFSIMDLMMKP

Sequences:

>Translated_376_residues
MTFHVMIIPTLGCQCNCKYCWGSESTKEMMDISVIDDIITWLKDFRDDKVHFTFHGGEPLLAGYDFYAEALEKLSKIDNL
EGFSLQSNIWLLSDELIDLFLKYNVAVSTSIDGPEEINDYQRAEGYFKKTIGRYERAKEKGLNINFVLTVTQYSKDYSDE
LYEFFKSHGMNLKIHAALPSLRGDNADPWALDQEEHGKLLIDWLDKYLYDLDKFSVMDLDHIAKSTFRRRGTLCTFADCI
GTTLAVGADGSIYPCYRFVGMDEYILGNVKANPSFDKLKESDAWAKLQEFREYVDENCAKCRYVKYCEGGCPYNAIVASK
TPKAVDPQCKAYKMIFGEVSKRLNKEFAKNAFGGLNGPGIKKENEAFSIMDLMMKP
>Mature_375_residues
TFHVMIIPTLGCQCNCKYCWGSESTKEMMDISVIDDIITWLKDFRDDKVHFTFHGGEPLLAGYDFYAEALEKLSKIDNLE
GFSLQSNIWLLSDELIDLFLKYNVAVSTSIDGPEEINDYQRAEGYFKKTIGRYERAKEKGLNINFVLTVTQYSKDYSDEL
YEFFKSHGMNLKIHAALPSLRGDNADPWALDQEEHGKLLIDWLDKYLYDLDKFSVMDLDHIAKSTFRRRGTLCTFADCIG
TTLAVGADGSIYPCYRFVGMDEYILGNVKANPSFDKLKESDAWAKLQEFREYVDENCAKCRYVKYCEGGCPYNAIVASKT
PKAVDPQCKAYKMIFGEVSKRLNKEFAKNAFGGLNGPGIKKENEAFSIMDLMMKP

Specific function: Unknown

COG id: COG0641

COG function: function code R; Arylsulfatase regulator (Fe-S oxidoreductase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. Anaerobic sulfatase-maturating enzyme family [H]

Homologues:

Organism=Escherichia coli, GI87081923, Length=377, Percent_Identity=25.9946949602122, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI48994973, Length=385, Percent_Identity=24.6753246753247, Blast_Score=99, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 42931; Mature: 42800

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFHVMIIPTLGCQCNCKYCWGSESTKEMMDISVIDDIITWLKDFRDDKVHFTFHGGEPL
CEEEEEEEECCCCEECEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCE
LAGYDFYAEALEKLSKIDNLEGFSLQSNIWLLSDELIDLFLKYNVAVSTSIDGPEEINDY
EECHHHHHHHHHHHHHHCCCCCCEECCCEEEEHHHHHHHHHHHCEEEEECCCCHHHHHHH
QRAEGYFKKTIGRYERAKEKGLNINFVLTVTQYSKDYSDELYEFFKSHGMNLKIHAALPS
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCC
LRGDNADPWALDQEEHGKLLIDWLDKYLYDLDKFSVMDLDHIAKSTFRRRGTLCTFADCI
CCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEHHHHHH
GTTLAVGADGSIYPCYRFVGMDEYILGNVKANPSFDKLKESDAWAKLQEFREYVDENCAK
HCEEEECCCCCCCHHHHHCCCCHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
CRYVKYCEGGCPYNAIVASKTPKAVDPQCKAYKMIFGEVSKRLNKEFAKNAFGGLNGPGI
CCCCEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KKENEAFSIMDLMMKP
CCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TFHVMIIPTLGCQCNCKYCWGSESTKEMMDISVIDDIITWLKDFRDDKVHFTFHGGEPL
EEEEEEEECCCCEECEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCE
LAGYDFYAEALEKLSKIDNLEGFSLQSNIWLLSDELIDLFLKYNVAVSTSIDGPEEINDY
EECHHHHHHHHHHHHHHCCCCCCEECCCEEEEHHHHHHHHHHHCEEEEECCCCHHHHHHH
QRAEGYFKKTIGRYERAKEKGLNINFVLTVTQYSKDYSDELYEFFKSHGMNLKIHAALPS
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCC
LRGDNADPWALDQEEHGKLLIDWLDKYLYDLDKFSVMDLDHIAKSTFRRRGTLCTFADCI
CCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEHHHHHH
GTTLAVGADGSIYPCYRFVGMDEYILGNVKANPSFDKLKESDAWAKLQEFREYVDENCAK
HCEEEECCCCCCCHHHHHCCCCHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
CRYVKYCEGGCPYNAIVASKTPKAVDPQCKAYKMIFGEVSKRLNKEFAKNAFGGLNGPGI
CCCCEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KKENEAFSIMDLMMKP
CCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]