| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148643631
Identifier: 148643631
GI number: 148643631
Start: 1614941
End: 1615423
Strand: Reverse
Name: 148643631
Synonym: Msm_1571
Alternate gene names: NA
Gene position: 1615423-1614941 (Counterclockwise)
Preceding gene: 148643632
Following gene: 148643628
Centisome position: 87.17
GC content: 28.16
Gene sequence:
>483_bases ATGAATATTGAAAAAAGTATTGAAAATATTGTAGCTAAATGTGATAATTATATAGACCCTCAACTAGCTATTTGTATAAT CCGTGATAATTGCACAATGGGTTCCAACAACATTGGTGAATTAAAAAAATATGGAATTGAAAATGAAGACAGCTATGTTG AAAAAGTCTTAAAAGTCCTTAAACATGAAAATATCTTTATAACTTTCGGAATGCTCGCTTTTATACCTATGTTTAATGAA TGCGATATTTTTTCCATTGAAGATAAAACTATAAGTCTCAGCAGTGAAGAATTTCAAAAATATGGGGATTTAAAAGAAGA GTACTTCGGAATCCTGATTAAAAAAAACAGCAATGACTTCCTTATCGGCAGCTGTGATTTATGCGGATGTAAAATCGATT CATCATTTAGACAAATCAAAAAAAGCGAAGACAACTTCTATAAAACAATAAATAATATAATTGAAAGCAATATTATTTAT TGA
Upstream 100 bases:
>100_bases ATTTATTATGGATTTGATTCAATTCCTATAGATTGGCTCAATCAAATTCCAAAAATTGAAGAGATTCTTTCATTATGTGA AAGTTACGAAGGTGTTATTA
Downstream 100 bases:
>100_bases TTAATTTTTGTTTTATATTTTCCCACATTTCCTGCTCTTCACCGCAGCCTGTCATAATCACATAATTATAATCTGAAGTT TCAGCCAAATCCACCAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MNIEKSIENIVAKCDNYIDPQLAICIIRDNCTMGSNNIGELKKYGIENEDSYVEKVLKVLKHENIFITFGMLAFIPMFNE CDIFSIEDKTISLSSEEFQKYGDLKEEYFGILIKKNSNDFLIGSCDLCGCKIDSSFRQIKKSEDNFYKTINNIIESNIIY
Sequences:
>Translated_160_residues MNIEKSIENIVAKCDNYIDPQLAICIIRDNCTMGSNNIGELKKYGIENEDSYVEKVLKVLKHENIFITFGMLAFIPMFNE CDIFSIEDKTISLSSEEFQKYGDLKEEYFGILIKKNSNDFLIGSCDLCGCKIDSSFRQIKKSEDNFYKTINNIIESNIIY >Mature_160_residues MNIEKSIENIVAKCDNYIDPQLAICIIRDNCTMGSNNIGELKKYGIENEDSYVEKVLKVLKHENIFITFGMLAFIPMFNE CDIFSIEDKTISLSSEEFQKYGDLKEEYFGILIKKNSNDFLIGSCDLCGCKIDSSFRQIKKSEDNFYKTINNIIESNIIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18435; Mature: 18435
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIEKSIENIVAKCDNYIDPQLAICIIRDNCTMGSNNIGELKKYGIENEDSYVEKVLKVL CCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH KHENIFITFGMLAFIPMFNECDIFSIEDKTISLSSEEFQKYGDLKEEYFGILIKKNSNDF CCCCEEEEEHHHHHHCCCCCCCEEEECCCEEECCHHHHHHHCCHHHHHEEEEEEECCCCE LIGSCDLCGCKIDSSFRQIKKSEDNFYKTINNIIESNIIY EEECCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNIEKSIENIVAKCDNYIDPQLAICIIRDNCTMGSNNIGELKKYGIENEDSYVEKVLKVL CCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH KHENIFITFGMLAFIPMFNECDIFSIEDKTISLSSEEFQKYGDLKEEYFGILIKKNSNDF CCCCEEEEEHHHHHHCCCCCCCEEEECCCEEECCHHHHHHHCCHHHHHEEEEEEECCCCE LIGSCDLCGCKIDSSFRQIKKSEDNFYKTINNIIESNIIY EEECCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA