Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is yfiQ [C]

Identifier: 148643531

GI number: 148643531

Start: 1495093

End: 1497189

Strand: Reverse

Name: yfiQ [C]

Synonym: Msm_1471

Alternate gene names: 148643531

Gene position: 1497189-1495093 (Counterclockwise)

Preceding gene: 148643534

Following gene: 148643530

Centisome position: 80.79

GC content: 36.86

Gene sequence:

>2097_bases
ATGAAAGATCTCAATAAAATGTTTAAACCTGATTCAGTTGCTGTAATCGGAGCTTCAAACACCCCAGGTAAAGTAGGTTA
TATTATCATAGATAATATCATCTCTGGAGGATATAAAGGAAAAGTATACCCAATTAACCCAAAAAGCGGAGAAATCCAAG
GGTTAAAAGCATATGAAAATATTAAAGATGTTCCTGAAAAGGTGGACTTAGTAATCATGTCCATTCCTGCAGCTTTTGTA
AATGAATCAATAAAAGACTGTGGTGAAGCTGGCGTAGAAAACATGGTAGTTATTAGTGCTGGTTTCAAAGAAATTGGAGA
AGAAGGTGCAAAATTAGAAGAAGAATTAGTTGCACTTAGTAAAGAATATGGGATAAATATTATTGGACCAAACAGTTTAG
GAATTACAGATTCCCATACTCCATTAAACTCTTCATTTGCACAAATGATGCCGCCAAAAGGAAATATTGCATTTATTTCC
CAAAGTGGAGCTATGATGGTAGCACTTCTTGATTGGAGTCTTACTTCAGGAATCGGATTCAGTAAAGTAATCAGTCTTGG
AAACAAAGCAGGTGTAAGTGAAACCGAATTAATGAATTACTTAGCTGAAGACCCTGAAACTGCAGTTATTATATGTTATT
TAGAATCAATATCTGACGATGATAATTTTGTTAAAGCAATGAGACAAACCACTGCTAAAAAACCAATTGTTGTACTTAAA
TCCGGTTCAAGTAATGCCGGTGCAGAAGCTGCATCTTCCCACACTGGTGCTTTAGCCGGTAGTGACTTGGCATTTGATAC
TGCTTTTGAACAATCCGGAATTCTTCGTGTAAGCAGCATGGCAGAATTATTTGATATCGGATTGGCATTTTCCAAAGCAC
CACTTCCAGAAGGAAACAATGTAGCTATCATTACCAATGCTGGTGGTGGAGGAGTACTTACTGTAGATGAAATGGAAAGA
CAGGGATTGAAACTTGTTCAATTTGATGAAGAAACCAAAGAAAAATTAAGGAAAGGTATTCCTGAAGAAGGTAGTGTAAA
CAACCCTATTGATGTTTTAGGAGACGCTCCAGTACAAAGGTACAAAGAAACATTAGATATTGTTTTAAAAGATGATCAAG
TAGACAGTTTAATCATTATGGTTTGTCCTACAGCATCTGCAGACCCAGACGGAATTGCAGCTGCAATCTTAGAAGAAAGA
GAAAAATTCGGAAAACCTATTTTAGTTGTAAACATGGGTGGACCAACCTTTGAAGCAGCAAACCATGCACTAAGGTCCCA
CAATGTGCCTACTTATGTTTTCCCTGAAAATGCAGTAGATGCACTTGCAGCTATGACAACCTATGCTGAATTGGAACGCA
GAGAAGCTGATTCATGTATTGATGATTTAGACAACATCGATAAAAAAGCTGTAGAAGAAATATTTGCTAAAGTTAAAGCT
GACGGCAGAGACACCTTACTTGGTAGTGAAGCATATGCAGTAGCTGAAGCTTATGGAATTGAAGCTGCACCAATTAAATT
AGCTACCAATGCAGATGAAGCAAGCCAATTAGCAGCAGATATGGAATTCCCTGTTGTACTTAAAATAGCTTCTGACAAAA
TACTTCACAAATCAGATATCGGCGGAGTAAAAGTAGGAATTGAAAGTGAAGAAGAAGCTAAAGCAACTTTCGATGAAATC
ATAGCTAATGCTAAAAAAGCACATCCTGACATTGTGCCGGATGGTGTAGAAGTGCAAAAAATGATGGAAACCGGTCAGGA
AGTAATTGTCGGTATGATTAAAGACAAACAATTCGGACCGATGATTGCATTTGGTATGGGTGGAATTTACGTTAACCTTA
TTGAAGATGTATCCTTTAAATTAGCTAACGGTATCAGCAGTCAGGAAATTGATGAGCAAATCAATGACACTAAAGTTAGC
GAATTGCTTAAAGGTTACAGAGGAGAAGCACCATGCGATATTGATGCTGTAAAAGAAGCTATTAAAAGAGTAGCTAGGTT
AACCTTAGACTTCCCTGAAATATCCGAATTGGATATTAACCCAATTTTCGTATACGAAAACGGATCAAGTGCTCTTGATA
TAAAAATCAAATTATAA

Upstream 100 bases:

>100_bases
TAGTATAATAATTTTTAATTATTTATCATTACAAATTATAACGTCATAAAAATTATAATTTAAATAATGGTAAAAATTAA
AGAACTAGGAGAAAAAACCT

Downstream 100 bases:

>100_bases
TTTCTCATTTGAGAAATTACTCTTTTTTCTTTTAAACATTAGTTGGAGGTTATACTATAACTAATGAAATAGATTTGGAA
TTATATACCATAGCTATAAC

Product: acyl-CoA synthetase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 698; Mature: 698

Protein sequence:

>698_residues
MKDLNKMFKPDSVAVIGASNTPGKVGYIIIDNIISGGYKGKVYPINPKSGEIQGLKAYENIKDVPEKVDLVIMSIPAAFV
NESIKDCGEAGVENMVVISAGFKEIGEEGAKLEEELVALSKEYGINIIGPNSLGITDSHTPLNSSFAQMMPPKGNIAFIS
QSGAMMVALLDWSLTSGIGFSKVISLGNKAGVSETELMNYLAEDPETAVIICYLESISDDDNFVKAMRQTTAKKPIVVLK
SGSSNAGAEAASSHTGALAGSDLAFDTAFEQSGILRVSSMAELFDIGLAFSKAPLPEGNNVAIITNAGGGGVLTVDEMER
QGLKLVQFDEETKEKLRKGIPEEGSVNNPIDVLGDAPVQRYKETLDIVLKDDQVDSLIIMVCPTASADPDGIAAAILEER
EKFGKPILVVNMGGPTFEAANHALRSHNVPTYVFPENAVDALAAMTTYAELERREADSCIDDLDNIDKKAVEEIFAKVKA
DGRDTLLGSEAYAVAEAYGIEAAPIKLATNADEASQLAADMEFPVVLKIASDKILHKSDIGGVKVGIESEEEAKATFDEI
IANAKKAHPDIVPDGVEVQKMMETGQEVIVGMIKDKQFGPMIAFGMGGIYVNLIEDVSFKLANGISSQEIDEQINDTKVS
ELLKGYRGEAPCDIDAVKEAIKRVARLTLDFPEISELDINPIFVYENGSSALDIKIKL

Sequences:

>Translated_698_residues
MKDLNKMFKPDSVAVIGASNTPGKVGYIIIDNIISGGYKGKVYPINPKSGEIQGLKAYENIKDVPEKVDLVIMSIPAAFV
NESIKDCGEAGVENMVVISAGFKEIGEEGAKLEEELVALSKEYGINIIGPNSLGITDSHTPLNSSFAQMMPPKGNIAFIS
QSGAMMVALLDWSLTSGIGFSKVISLGNKAGVSETELMNYLAEDPETAVIICYLESISDDDNFVKAMRQTTAKKPIVVLK
SGSSNAGAEAASSHTGALAGSDLAFDTAFEQSGILRVSSMAELFDIGLAFSKAPLPEGNNVAIITNAGGGGVLTVDEMER
QGLKLVQFDEETKEKLRKGIPEEGSVNNPIDVLGDAPVQRYKETLDIVLKDDQVDSLIIMVCPTASADPDGIAAAILEER
EKFGKPILVVNMGGPTFEAANHALRSHNVPTYVFPENAVDALAAMTTYAELERREADSCIDDLDNIDKKAVEEIFAKVKA
DGRDTLLGSEAYAVAEAYGIEAAPIKLATNADEASQLAADMEFPVVLKIASDKILHKSDIGGVKVGIESEEEAKATFDEI
IANAKKAHPDIVPDGVEVQKMMETGQEVIVGMIKDKQFGPMIAFGMGGIYVNLIEDVSFKLANGISSQEIDEQINDTKVS
ELLKGYRGEAPCDIDAVKEAIKRVARLTLDFPEISELDINPIFVYENGSSALDIKIKL
>Mature_698_residues
MKDLNKMFKPDSVAVIGASNTPGKVGYIIIDNIISGGYKGKVYPINPKSGEIQGLKAYENIKDVPEKVDLVIMSIPAAFV
NESIKDCGEAGVENMVVISAGFKEIGEEGAKLEEELVALSKEYGINIIGPNSLGITDSHTPLNSSFAQMMPPKGNIAFIS
QSGAMMVALLDWSLTSGIGFSKVISLGNKAGVSETELMNYLAEDPETAVIICYLESISDDDNFVKAMRQTTAKKPIVVLK
SGSSNAGAEAASSHTGALAGSDLAFDTAFEQSGILRVSSMAELFDIGLAFSKAPLPEGNNVAIITNAGGGGVLTVDEMER
QGLKLVQFDEETKEKLRKGIPEEGSVNNPIDVLGDAPVQRYKETLDIVLKDDQVDSLIIMVCPTASADPDGIAAAILEER
EKFGKPILVVNMGGPTFEAANHALRSHNVPTYVFPENAVDALAAMTTYAELERREADSCIDDLDNIDKKAVEEIFAKVKA
DGRDTLLGSEAYAVAEAYGIEAAPIKLATNADEASQLAADMEFPVVLKIASDKILHKSDIGGVKVGIESEEEAKATFDEI
IANAKKAHPDIVPDGVEVQKMMETGQEVIVGMIKDKQFGPMIAFGMGGIYVNLIEDVSFKLANGISSQEIDEQINDTKVS
ELLKGYRGEAPCDIDAVKEAIKRVARLTLDFPEISELDINPIFVYENGSSALDIKIKL

Specific function: Unknown

COG id: COG1042

COG function: function code C; Acyl-CoA synthetase (NDP forming)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfiQ [H]

Homologues:

Organism=Escherichia coli, GI1788938, Length=711, Percent_Identity=30.6610407876231, Blast_Score=337, Evalue=2e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014089
- InterPro:   IPR013650
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR005809
- InterPro:   IPR016102 [H]

Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]

EC number: NA

Molecular weight: Translated: 74641; Mature: 74641

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLNKMFKPDSVAVIGASNTPGKVGYIIIDNIISGGYKGKVYPINPKSGEIQGLKAYEN
CCCHHHHCCCCCEEEEECCCCCCCEEEEEEECHHCCCCCCEEEECCCCCCCCCCCHHHHH
IKDVPEKVDLVIMSIPAAFVNESIKDCGEAGVENMVVISAGFKEIGEEGAKLEEELVALS
HHHCCHHHCEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
KEYGINIIGPNSLGITDSHTPLNSSFAQMMPPKGNIAFISQSGAMMVALLDWSLTSGIGF
HHCCEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCEEEEEEECHHHCCCCH
SKVISLGNKAGVSETELMNYLAEDPETAVIICYLESISDDDNFVKAMRQTTAKKPIVVLK
HHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEE
SGSSNAGAEAASSHTGALAGSDLAFDTAFEQSGILRVSSMAELFDIGLAFSKAPLPEGNN
CCCCCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCC
VAIITNAGGGGVLTVDEMERQGLKLVQFDEETKEKLRKGIPEEGSVNNPIDVLGDAPVQR
EEEEEECCCCCEEEEEHHHHCCCEEEEECHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHH
YKETLDIVLKDDQVDSLIIMVCPTASADPDGIAAAILEEREKFGKPILVVNMGGPTFEAA
HHHHHEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHH
NHALRSHNVPTYVFPENAVDALAAMTTYAELERREADSCIDDLDNIDKKAVEEIFAKVKA
HHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
DGRDTLLGSEAYAVAEAYGIEAAPIKLATNADEASQLAADMEFPVVLKIASDKILHKSDI
CCCCEEECCHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCEEEEECCCCCEECCCC
GGVKVGIESEEEAKATFDEIIANAKKAHPDIVPDGVEVQKMMETGQEVIVGMIKDKQFGP
CCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHEEHHHCCCCCCC
MIAFGMGGIYVNLIEDVSFKLANGISSQEIDEQINDTKVSELLKGYRGEAPCDIDAVKEA
EEEEECCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IKRVARLTLDFPEISELDINPIFVYENGSSALDIKIKL
HHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEEC
>Mature Secondary Structure
MKDLNKMFKPDSVAVIGASNTPGKVGYIIIDNIISGGYKGKVYPINPKSGEIQGLKAYEN
CCCHHHHCCCCCEEEEECCCCCCCEEEEEEECHHCCCCCCEEEECCCCCCCCCCCHHHHH
IKDVPEKVDLVIMSIPAAFVNESIKDCGEAGVENMVVISAGFKEIGEEGAKLEEELVALS
HHHCCHHHCEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
KEYGINIIGPNSLGITDSHTPLNSSFAQMMPPKGNIAFISQSGAMMVALLDWSLTSGIGF
HHCCEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCEEEEEEECHHHCCCCH
SKVISLGNKAGVSETELMNYLAEDPETAVIICYLESISDDDNFVKAMRQTTAKKPIVVLK
HHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEE
SGSSNAGAEAASSHTGALAGSDLAFDTAFEQSGILRVSSMAELFDIGLAFSKAPLPEGNN
CCCCCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCC
VAIITNAGGGGVLTVDEMERQGLKLVQFDEETKEKLRKGIPEEGSVNNPIDVLGDAPVQR
EEEEEECCCCCEEEEEHHHHCCCEEEEECHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHH
YKETLDIVLKDDQVDSLIIMVCPTASADPDGIAAAILEEREKFGKPILVVNMGGPTFEAA
HHHHHEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHH
NHALRSHNVPTYVFPENAVDALAAMTTYAELERREADSCIDDLDNIDKKAVEEIFAKVKA
HHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
DGRDTLLGSEAYAVAEAYGIEAAPIKLATNADEASQLAADMEFPVVLKIASDKILHKSDI
CCCCEEECCHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCEEEEECCCCCEECCCC
GGVKVGIESEEEAKATFDEIIANAKKAHPDIVPDGVEVQKMMETGQEVIVGMIKDKQFGP
CCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHEEHHHCCCCCCC
MIAFGMGGIYVNLIEDVSFKLANGISSQEIDEQINDTKVSELLKGYRGEAPCDIDAVKEA
EEEEECCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IKRVARLTLDFPEISELDINPIFVYENGSSALDIKIKL
HHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]