Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

Click here to switch to the map view.

The map label for this gene is 148643030

Identifier: 148643030

GI number: 148643030

Start: 932212

End: 932517

Strand: Reverse

Name: 148643030

Synonym: Msm_0970

Alternate gene names: NA

Gene position: 932517-932212 (Counterclockwise)

Preceding gene: 148643031

Following gene: 148643029

Centisome position: 50.32

GC content: 26.47

Gene sequence:

>306_bases
TTGCCGGTTATTGAAAAGACAAAGGATTCAAAAAGAAAGATTAAACAACTTTATGATTCTGATTCAGTTTTATTTGAAGA
AACTTTACTTGTTTCAAATAATATTAAATACAGTATCTGCTTTGTTCCTAAAGCCGAAGTATATGATGTGATTATTGAAG
ATTTTGAAAATAATTTTACTAAATATCAGGTTTTTCATAAATTGTCTCCTTCAACATTAAAATACTTCAATTTACTTAAA
GGTGAAAGTTATTTGGATGATTTCGGCAATGAATTTAAGTGTATCAGTCATACGATTGAGTATTGA

Upstream 100 bases:

>100_bases
CTAAGCATTTTAAGCAACATTAAATTTAAACTTATTGGGATTTATAGTTTAATATTATTATTTTTTTAATTTTGATGACA
GGGATTTTTAGGTGAACAGA

Downstream 100 bases:

>100_bases
TTAACCTATTTTTTCATAAAAAAGATTATATATAAACTAAAATAAATTATGTATGTATAAATTATTTCATGGAAATGATT
ATTAATTTGGAGGTTTATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MPVIEKTKDSKRKIKQLYDSDSVLFEETLLVSNNIKYSICFVPKAEVYDVIIEDFENNFTKYQVFHKLSPSTLKYFNLLK
GESYLDDFGNEFKCISHTIEY

Sequences:

>Translated_101_residues
MPVIEKTKDSKRKIKQLYDSDSVLFEETLLVSNNIKYSICFVPKAEVYDVIIEDFENNFTKYQVFHKLSPSTLKYFNLLK
GESYLDDFGNEFKCISHTIEY
>Mature_100_residues
PVIEKTKDSKRKIKQLYDSDSVLFEETLLVSNNIKYSICFVPKAEVYDVIIEDFENNFTKYQVFHKLSPSTLKYFNLLKG
ESYLDDFGNEFKCISHTIEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11936; Mature: 11805

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVIEKTKDSKRKIKQLYDSDSVLFEETLLVSNNIKYSICFVPKAEVYDVIIEDFENNFT
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHEECCCCEEEEEECCCHHHHHHHHHHHCCCCH
KYQVFHKLSPSTLKYFNLLKGESYLDDFGNEFKCISHTIEY
HHHHHHHCCCHHHHHHHHHCCCHHHHHCCCCCEEHHHCCCC
>Mature Secondary Structure 
PVIEKTKDSKRKIKQLYDSDSVLFEETLLVSNNIKYSICFVPKAEVYDVIIEDFENNFT
CCCCCCCHHHHHHHHHHCCCCHHHHHHHEECCCCEEEEEECCCHHHHHHHHHHHCCCCH
KYQVFHKLSPSTLKYFNLLKGESYLDDFGNEFKCISHTIEY
HHHHHHHCCCHHHHHHHHHCCCHHHHHCCCCCEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA