| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642947
Identifier: 148642947
GI number: 148642947
Start: 849066
End: 849485
Strand: Reverse
Name: 148642947
Synonym: Msm_0887
Alternate gene names: NA
Gene position: 849485-849066 (Counterclockwise)
Preceding gene: 148642948
Following gene: 148642946
Centisome position: 45.84
GC content: 29.76
Gene sequence:
>420_bases ATGTATAAAAAAATTTTAGTTCCTACTGATGGATCAGAAGCTGCAGAAAAAGAAGTTGAAAAAGTTGGAGATTTACTTGC TGAAGATGGTGAAATCATCATATTGTCAGTTGCATCTGAATTGACTCCACACCAATTCCAAAGTAAAGAAGATATTGATA AATTAAATCAATCTTTCTTAGATGAAGCTCAATTTAATGTGGATAAAATGAAAGCTAAATTTGATCCAAATCTTAATGTT ACAACTAAAGTTCTTGTTGGTTTTCCTGCAGAAACTATTGTTAAAGTTGCAGAAGAAGAGGATGTTGGATTAATAGCTAT TTCATCATCTGGTAAAGGTAGAGTTACAAAATTCTTTATTGGAAGTGTAGCTGAAAAAGTTATTCACTCCTTTAAAAAAG ATGTTTTATTAGTACATTAA
Upstream 100 bases:
>100_bases TTACTTCTATAGCTAAAAATTATTTTCATAATATTTATTAAATAGTTTAAATTAAAATAAAAAATGCATGAACTAAACAT TTTTCATGAGGTGAAAAATT
Downstream 100 bases:
>100_bases GCAGCTATTTTTCATAGCTGCTTTTATTTTTTACAAATTTTTACTTTTTTTTAAAGAAAATGTTTATAATTGGTGTTAGG GTGATTAAATCAATATTTAA
Product: adenine nucleotide alpha hydrolase-like stress protein
Products: NA
Alternate protein names: USP MTH_1154 [H]
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MYKKILVPTDGSEAAEKEVEKVGDLLAEDGEIIILSVASELTPHQFQSKEDIDKLNQSFLDEAQFNVDKMKAKFDPNLNV TTKVLVGFPAETIVKVAEEEDVGLIAISSSGKGRVTKFFIGSVAEKVIHSFKKDVLLVH
Sequences:
>Translated_139_residues MYKKILVPTDGSEAAEKEVEKVGDLLAEDGEIIILSVASELTPHQFQSKEDIDKLNQSFLDEAQFNVDKMKAKFDPNLNV TTKVLVGFPAETIVKVAEEEDVGLIAISSSGKGRVTKFFIGSVAEKVIHSFKKDVLLVH >Mature_139_residues MYKKILVPTDGSEAAEKEVEKVGDLLAEDGEIIILSVASELTPHQFQSKEDIDKLNQSFLDEAQFNVDKMKAKFDPNLNV TTKVLVGFPAETIVKVAEEEDVGLIAISSSGKGRVTKFFIGSVAEKVIHSFKKDVLLVH
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 15276; Mature: 15276
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKKILVPTDGSEAAEKEVEKVGDLLAEDGEIIILSVASELTPHQFQSKEDIDKLNQSFL CCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHCCCHHHHHHHHHHHH DEAQFNVDKMKAKFDPNLNVTTKVLVGFPAETIVKVAEEEDVGLIAISSSGKGRVTKFFI HHHHCCHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH GSVAEKVIHSFKKDVLLVH HHHHHHHHHHHHHCEEEEC >Mature Secondary Structure MYKKILVPTDGSEAAEKEVEKVGDLLAEDGEIIILSVASELTPHQFQSKEDIDKLNQSFL CCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHCCCHHHHHHHHHHHH DEAQFNVDKMKAKFDPNLNVTTKVLVGFPAETIVKVAEEEDVGLIAISSSGKGRVTKFFI HHHHCCHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH GSVAEKVIHSFKKDVLLVH HHHHHHHHHHHHHCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]