| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642935
Identifier: 148642935
GI number: 148642935
Start: 830899
End: 832122
Strand: Reverse
Name: 148642935
Synonym: Msm_0875
Alternate gene names: NA
Gene position: 832122-830899 (Counterclockwise)
Preceding gene: 148642936
Following gene: 148642934
Centisome position: 44.9
GC content: 34.72
Gene sequence:
>1224_bases ATGAATAGTAGAACAATTGAACTTTCTGGTCATGTTATTGATTCATTAACTTTACCAAAAGCTCTGGATATTATCATGGA TAAAGGTGGAGATTTTGATTTCTTAGAATTTGATGTAGGTAAAAGAAAAACTGATACTAGTAAGGTTAAGATGGCAGTTT ATGCAGAGTCTATCGACCTTTTAAATTCTATTTTAGATGAGTTGTCAGTATTAGGTGCATCAATATCTGAATTAAAAGAG GTTGAATTAGTTGCATCTTCAAAAGATAAAGTTGCTCCGGAAGGTTTTTATTCTACTTCAAATCATACAACTCACATTCT CTATAAAGGTAATTGGATTGTTGTTGAAAACATTGAGATGGATTGTTTAATCTGTGTTGATGAAAAAAATTCTCGTGCAT CAGTTAAACCGATAGCGGAAATTAAGGCAGGAGATATGATTGTTGTTGGTCGTGACGGAATAAAAGTTACACCACCTCAA AGGTCCAGAGAAAAAAGTGGAACCTTTGAATTTATGAACAGTGATGTTTCTTCTGAAAAACCTTTGATGAATTTAATTAG GGGAATTGCAAAAGAAATTAAAGAAATCAAAAGTAAAGGAGGTAAAATAGCTATTGTTGGAGGTCCTGCTATTGTACACA CAGGATCAGGCAAATATCTGGCTGCTTTAATCAGGGAAGGATATATTGATTCTCTTCTTGCAGGTAATGCACTGGCTACT CACGATATTGAAAGCAATATTTTTGGAACTTCCTTAGGTATTGAAGTGGAAACAGGAGAAATTATAGCTCATGGACATAC TCATCATATGAGGGCCATTAATAAAATCAACCGTTCAGGATCAATTAAACAGGCTGTTGAAGATGGCACCTTAACTGGCG GAATCATGTATGAATGTATTAAAAAGGACATTCCGTATGTTTTAGCAGGTTCTATTCGTGATGACGGTCCTCTGCCTGAT GTAATAACTGACACTGCAGAGTCACAAAAATTAATGCGTAAACAGGCTCAGGAAGTTGATATGGTAATTATGATAGCTAC CATGTTGCATTCAATAGCTATGGGTAATTTACTTCCTTCAAAAGTTAAAAGTATCTGTGTGGATATTAATCCTGCTACTG TTACCAAATTATCTGACAGGGGAAGTGCTCAGGTAGTTAGTATTGTAACAGATATTGGTACATTTTTACCTCTTTTATAT GAATCCCTACATGAAAGTGATTAG
Upstream 100 bases:
>100_bases TAATTATTACTTTTCTTATAAAAAATTAATATGGAATTATTTAAATATTAGCTTAAAGTAAAATTACAATATTAATAATT AATAATTAGGAGCAAAAATT
Downstream 100 bases:
>100_bases ATGCAATTCAGTGCATATATGTTAGACGTTATAACTGATTCAATTTATCCTGCACGTATTTCAGTTGAAGGCGGATTTTT TAAAGAGATAGTTCCAATTG
Product: lysine-oxoglutarate reductase/saccharopine dehydrogenase (LOR/SDH) bifunctional enzyme
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MNSRTIELSGHVIDSLTLPKALDIIMDKGGDFDFLEFDVGKRKTDTSKVKMAVYAESIDLLNSILDELSVLGASISELKE VELVASSKDKVAPEGFYSTSNHTTHILYKGNWIVVENIEMDCLICVDEKNSRASVKPIAEIKAGDMIVVGRDGIKVTPPQ RSREKSGTFEFMNSDVSSEKPLMNLIRGIAKEIKEIKSKGGKIAIVGGPAIVHTGSGKYLAALIREGYIDSLLAGNALAT HDIESNIFGTSLGIEVETGEIIAHGHTHHMRAINKINRSGSIKQAVEDGTLTGGIMYECIKKDIPYVLAGSIRDDGPLPD VITDTAESQKLMRKQAQEVDMVIMIATMLHSIAMGNLLPSKVKSICVDINPATVTKLSDRGSAQVVSIVTDIGTFLPLLY ESLHESD
Sequences:
>Translated_407_residues MNSRTIELSGHVIDSLTLPKALDIIMDKGGDFDFLEFDVGKRKTDTSKVKMAVYAESIDLLNSILDELSVLGASISELKE VELVASSKDKVAPEGFYSTSNHTTHILYKGNWIVVENIEMDCLICVDEKNSRASVKPIAEIKAGDMIVVGRDGIKVTPPQ RSREKSGTFEFMNSDVSSEKPLMNLIRGIAKEIKEIKSKGGKIAIVGGPAIVHTGSGKYLAALIREGYIDSLLAGNALAT HDIESNIFGTSLGIEVETGEIIAHGHTHHMRAINKINRSGSIKQAVEDGTLTGGIMYECIKKDIPYVLAGSIRDDGPLPD VITDTAESQKLMRKQAQEVDMVIMIATMLHSIAMGNLLPSKVKSICVDINPATVTKLSDRGSAQVVSIVTDIGTFLPLLY ESLHESD >Mature_407_residues MNSRTIELSGHVIDSLTLPKALDIIMDKGGDFDFLEFDVGKRKTDTSKVKMAVYAESIDLLNSILDELSVLGASISELKE VELVASSKDKVAPEGFYSTSNHTTHILYKGNWIVVENIEMDCLICVDEKNSRASVKPIAEIKAGDMIVVGRDGIKVTPPQ RSREKSGTFEFMNSDVSSEKPLMNLIRGIAKEIKEIKSKGGKIAIVGGPAIVHTGSGKYLAALIREGYIDSLLAGNALAT HDIESNIFGTSLGIEVETGEIIAHGHTHHMRAINKINRSGSIKQAVEDGTLTGGIMYECIKKDIPYVLAGSIRDDGPLPD VITDTAESQKLMRKQAQEVDMVIMIATMLHSIAMGNLLPSKVKSICVDINPATVTKLSDRGSAQVVSIVTDIGTFLPLLY ESLHESD
Specific function: Unknown
COG id: COG1915
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005239 - InterPro: IPR007545 [H]
Pfam domain/function: PF04455 Saccharop_dh_N [H]
EC number: NA
Molecular weight: Translated: 44065; Mature: 44065
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSRTIELSGHVIDSLTLPKALDIIMDKGGDFDFLEFDVGKRKTDTSKVKMAVYAESIDL CCCCEEEECCCEECCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCHHHEEEEHHHHHHHH LNSILDELSVLGASISELKEVELVASSKDKVAPEGFYSTSNHTTHILYKGNWIVVENIEM HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEECCE DCLICVDEKNSRASVKPIAEIKAGDMIVVGRDGIKVTPPQRSREKSGTFEFMNSDVSSEK EEEEEECCCCCCCCCCCHHHCCCCCEEEECCCCEEECCCCCCCCCCCCHHHHCCCCCCCC PLMNLIRGIAKEIKEIKSKGGKIAIVGGPAIVHTGSGKYLAALIREGYIDSLLAGNALAT HHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEE HDIESNIFGTSLGIEVETGEIIAHGHTHHMRAINKINRSGSIKQAVEDGTLTGGIMYECI CCCCCCCCCCEEEEEEECCCEEECCCHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHH KKDIPYVLAGSIRDDGPLPDVITDTAESQKLMRKQAQEVDMVIMIATMLHSIAMGNLLPS HHCCCEEEECCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH KVKSICVDINPATVTKLSDRGSAQVVSIVTDIGTFLPLLYESLHESD HHHHHEEECCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNSRTIELSGHVIDSLTLPKALDIIMDKGGDFDFLEFDVGKRKTDTSKVKMAVYAESIDL CCCCEEEECCCEECCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCHHHEEEEHHHHHHHH LNSILDELSVLGASISELKEVELVASSKDKVAPEGFYSTSNHTTHILYKGNWIVVENIEM HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEECCE DCLICVDEKNSRASVKPIAEIKAGDMIVVGRDGIKVTPPQRSREKSGTFEFMNSDVSSEK EEEEEECCCCCCCCCCCHHHCCCCCEEEECCCCEEECCCCCCCCCCCCHHHHCCCCCCCC PLMNLIRGIAKEIKEIKSKGGKIAIVGGPAIVHTGSGKYLAALIREGYIDSLLAGNALAT HHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEE HDIESNIFGTSLGIEVETGEIIAHGHTHHMRAINKINRSGSIKQAVEDGTLTGGIMYECI CCCCCCCCCCEEEEEEECCCEEECCCHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHH KKDIPYVLAGSIRDDGPLPDVITDTAESQKLMRKQAQEVDMVIMIATMLHSIAMGNLLPS HHCCCEEEECCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH KVKSICVDINPATVTKLSDRGSAQVVSIVTDIGTFLPLLYESLHESD HHHHHEEECCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]