Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is 148642935

Identifier: 148642935

GI number: 148642935

Start: 830899

End: 832122

Strand: Reverse

Name: 148642935

Synonym: Msm_0875

Alternate gene names: NA

Gene position: 832122-830899 (Counterclockwise)

Preceding gene: 148642936

Following gene: 148642934

Centisome position: 44.9

GC content: 34.72

Gene sequence:

>1224_bases
ATGAATAGTAGAACAATTGAACTTTCTGGTCATGTTATTGATTCATTAACTTTACCAAAAGCTCTGGATATTATCATGGA
TAAAGGTGGAGATTTTGATTTCTTAGAATTTGATGTAGGTAAAAGAAAAACTGATACTAGTAAGGTTAAGATGGCAGTTT
ATGCAGAGTCTATCGACCTTTTAAATTCTATTTTAGATGAGTTGTCAGTATTAGGTGCATCAATATCTGAATTAAAAGAG
GTTGAATTAGTTGCATCTTCAAAAGATAAAGTTGCTCCGGAAGGTTTTTATTCTACTTCAAATCATACAACTCACATTCT
CTATAAAGGTAATTGGATTGTTGTTGAAAACATTGAGATGGATTGTTTAATCTGTGTTGATGAAAAAAATTCTCGTGCAT
CAGTTAAACCGATAGCGGAAATTAAGGCAGGAGATATGATTGTTGTTGGTCGTGACGGAATAAAAGTTACACCACCTCAA
AGGTCCAGAGAAAAAAGTGGAACCTTTGAATTTATGAACAGTGATGTTTCTTCTGAAAAACCTTTGATGAATTTAATTAG
GGGAATTGCAAAAGAAATTAAAGAAATCAAAAGTAAAGGAGGTAAAATAGCTATTGTTGGAGGTCCTGCTATTGTACACA
CAGGATCAGGCAAATATCTGGCTGCTTTAATCAGGGAAGGATATATTGATTCTCTTCTTGCAGGTAATGCACTGGCTACT
CACGATATTGAAAGCAATATTTTTGGAACTTCCTTAGGTATTGAAGTGGAAACAGGAGAAATTATAGCTCATGGACATAC
TCATCATATGAGGGCCATTAATAAAATCAACCGTTCAGGATCAATTAAACAGGCTGTTGAAGATGGCACCTTAACTGGCG
GAATCATGTATGAATGTATTAAAAAGGACATTCCGTATGTTTTAGCAGGTTCTATTCGTGATGACGGTCCTCTGCCTGAT
GTAATAACTGACACTGCAGAGTCACAAAAATTAATGCGTAAACAGGCTCAGGAAGTTGATATGGTAATTATGATAGCTAC
CATGTTGCATTCAATAGCTATGGGTAATTTACTTCCTTCAAAAGTTAAAAGTATCTGTGTGGATATTAATCCTGCTACTG
TTACCAAATTATCTGACAGGGGAAGTGCTCAGGTAGTTAGTATTGTAACAGATATTGGTACATTTTTACCTCTTTTATAT
GAATCCCTACATGAAAGTGATTAG

Upstream 100 bases:

>100_bases
TAATTATTACTTTTCTTATAAAAAATTAATATGGAATTATTTAAATATTAGCTTAAAGTAAAATTACAATATTAATAATT
AATAATTAGGAGCAAAAATT

Downstream 100 bases:

>100_bases
ATGCAATTCAGTGCATATATGTTAGACGTTATAACTGATTCAATTTATCCTGCACGTATTTCAGTTGAAGGCGGATTTTT
TAAAGAGATAGTTCCAATTG

Product: lysine-oxoglutarate reductase/saccharopine dehydrogenase (LOR/SDH) bifunctional enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MNSRTIELSGHVIDSLTLPKALDIIMDKGGDFDFLEFDVGKRKTDTSKVKMAVYAESIDLLNSILDELSVLGASISELKE
VELVASSKDKVAPEGFYSTSNHTTHILYKGNWIVVENIEMDCLICVDEKNSRASVKPIAEIKAGDMIVVGRDGIKVTPPQ
RSREKSGTFEFMNSDVSSEKPLMNLIRGIAKEIKEIKSKGGKIAIVGGPAIVHTGSGKYLAALIREGYIDSLLAGNALAT
HDIESNIFGTSLGIEVETGEIIAHGHTHHMRAINKINRSGSIKQAVEDGTLTGGIMYECIKKDIPYVLAGSIRDDGPLPD
VITDTAESQKLMRKQAQEVDMVIMIATMLHSIAMGNLLPSKVKSICVDINPATVTKLSDRGSAQVVSIVTDIGTFLPLLY
ESLHESD

Sequences:

>Translated_407_residues
MNSRTIELSGHVIDSLTLPKALDIIMDKGGDFDFLEFDVGKRKTDTSKVKMAVYAESIDLLNSILDELSVLGASISELKE
VELVASSKDKVAPEGFYSTSNHTTHILYKGNWIVVENIEMDCLICVDEKNSRASVKPIAEIKAGDMIVVGRDGIKVTPPQ
RSREKSGTFEFMNSDVSSEKPLMNLIRGIAKEIKEIKSKGGKIAIVGGPAIVHTGSGKYLAALIREGYIDSLLAGNALAT
HDIESNIFGTSLGIEVETGEIIAHGHTHHMRAINKINRSGSIKQAVEDGTLTGGIMYECIKKDIPYVLAGSIRDDGPLPD
VITDTAESQKLMRKQAQEVDMVIMIATMLHSIAMGNLLPSKVKSICVDINPATVTKLSDRGSAQVVSIVTDIGTFLPLLY
ESLHESD
>Mature_407_residues
MNSRTIELSGHVIDSLTLPKALDIIMDKGGDFDFLEFDVGKRKTDTSKVKMAVYAESIDLLNSILDELSVLGASISELKE
VELVASSKDKVAPEGFYSTSNHTTHILYKGNWIVVENIEMDCLICVDEKNSRASVKPIAEIKAGDMIVVGRDGIKVTPPQ
RSREKSGTFEFMNSDVSSEKPLMNLIRGIAKEIKEIKSKGGKIAIVGGPAIVHTGSGKYLAALIREGYIDSLLAGNALAT
HDIESNIFGTSLGIEVETGEIIAHGHTHHMRAINKINRSGSIKQAVEDGTLTGGIMYECIKKDIPYVLAGSIRDDGPLPD
VITDTAESQKLMRKQAQEVDMVIMIATMLHSIAMGNLLPSKVKSICVDINPATVTKLSDRGSAQVVSIVTDIGTFLPLLY
ESLHESD

Specific function: Unknown

COG id: COG1915

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005239
- InterPro:   IPR007545 [H]

Pfam domain/function: PF04455 Saccharop_dh_N [H]

EC number: NA

Molecular weight: Translated: 44065; Mature: 44065

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSRTIELSGHVIDSLTLPKALDIIMDKGGDFDFLEFDVGKRKTDTSKVKMAVYAESIDL
CCCCEEEECCCEECCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCHHHEEEEHHHHHHHH
LNSILDELSVLGASISELKEVELVASSKDKVAPEGFYSTSNHTTHILYKGNWIVVENIEM
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEECCE
DCLICVDEKNSRASVKPIAEIKAGDMIVVGRDGIKVTPPQRSREKSGTFEFMNSDVSSEK
EEEEEECCCCCCCCCCCHHHCCCCCEEEECCCCEEECCCCCCCCCCCCHHHHCCCCCCCC
PLMNLIRGIAKEIKEIKSKGGKIAIVGGPAIVHTGSGKYLAALIREGYIDSLLAGNALAT
HHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEE
HDIESNIFGTSLGIEVETGEIIAHGHTHHMRAINKINRSGSIKQAVEDGTLTGGIMYECI
CCCCCCCCCCEEEEEEECCCEEECCCHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHH
KKDIPYVLAGSIRDDGPLPDVITDTAESQKLMRKQAQEVDMVIMIATMLHSIAMGNLLPS
HHCCCEEEECCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
KVKSICVDINPATVTKLSDRGSAQVVSIVTDIGTFLPLLYESLHESD
HHHHHEEECCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSRTIELSGHVIDSLTLPKALDIIMDKGGDFDFLEFDVGKRKTDTSKVKMAVYAESIDL
CCCCEEEECCCEECCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCHHHEEEEHHHHHHHH
LNSILDELSVLGASISELKEVELVASSKDKVAPEGFYSTSNHTTHILYKGNWIVVENIEM
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEECCE
DCLICVDEKNSRASVKPIAEIKAGDMIVVGRDGIKVTPPQRSREKSGTFEFMNSDVSSEK
EEEEEECCCCCCCCCCCHHHCCCCCEEEECCCCEEECCCCCCCCCCCCHHHHCCCCCCCC
PLMNLIRGIAKEIKEIKSKGGKIAIVGGPAIVHTGSGKYLAALIREGYIDSLLAGNALAT
HHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEE
HDIESNIFGTSLGIEVETGEIIAHGHTHHMRAINKINRSGSIKQAVEDGTLTGGIMYECI
CCCCCCCCCCEEEEEEECCCEEECCCHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHH
KKDIPYVLAGSIRDDGPLPDVITDTAESQKLMRKQAQEVDMVIMIATMLHSIAMGNLLPS
HHCCCEEEECCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
KVKSICVDINPATVTKLSDRGSAQVVSIVTDIGTFLPLLYESLHESD
HHHHHEEECCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]