| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
Click here to switch to the map view.
The map label for this gene is 148642869
Identifier: 148642869
GI number: 148642869
Start: 769161
End: 769721
Strand: Reverse
Name: 148642869
Synonym: Msm_0809
Alternate gene names: NA
Gene position: 769721-769161 (Counterclockwise)
Preceding gene: 148642870
Following gene: 148642868
Centisome position: 41.54
GC content: 30.3
Gene sequence:
>561_bases ATGTTAGTAGAATGCTATGATGAAAAAGGCGCAGAAGTCTATGAAATGATTATTAAACAGATTTTTCAGGATTTGGTTCT TGGTCCTGCTGTTGAAGATTTAAAAGCTTTTGCTAACCCTGATGAAGCAGTTTTTATTTTAGCTATTAAAATGAAAAAGA CTTCTGGAGTTATTAAATTTGGTGATGTGGCTAACTTCACTTATGATAAAAATAATAATGTTACTAAAATATTTATTGAA AATGAGAATTATCTTCCAAATATTTTAAAGTTATTGTGGAGAAGATATTCTAGAGATGAACTTTATCAGCCGACCAGATA CAATATTGATCTTGACGGAAATCAGATGGAATTGGAAGATTTGGTTGTTGATGATCCTCATTCAAATCTTCAAAGAAGAA TTTATGATGCAATCTTTAGAATTTTGCCTGAAGGATTTAAAATAATTAAAGATGTTTCTGTTGGAGATATTGTGGCAGTA ATAGCTACTGATGAATTAATTAAGGATGATTGGATTGACAAAGCTAATGACTATATTGCAGAGTTGAATAGGGGTTTGTA G
Upstream 100 bases:
>100_bases TGTACCTCCGTATTCTCAACACATTGGAGCAGTAGGTGCTGCTCTTTTAGTATCTGGAATGGGTCACAGGCAAGATAATA AATAGTCAAGAGTTGATTTG
Downstream 100 bases:
>100_bases ATAACTTTATAATATAGTTCGATTATATACAAACATAATTACAAGTAGGGGAGTGATGTTATATGAATGAACATAACGGT TCCAGGTTTGCACACATAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MLVECYDEKGAEVYEMIIKQIFQDLVLGPAVEDLKAFANPDEAVFILAIKMKKTSGVIKFGDVANFTYDKNNNVTKIFIE NENYLPNILKLLWRRYSRDELYQPTRYNIDLDGNQMELEDLVVDDPHSNLQRRIYDAIFRILPEGFKIIKDVSVGDIVAV IATDELIKDDWIDKANDYIAELNRGL
Sequences:
>Translated_186_residues MLVECYDEKGAEVYEMIIKQIFQDLVLGPAVEDLKAFANPDEAVFILAIKMKKTSGVIKFGDVANFTYDKNNNVTKIFIE NENYLPNILKLLWRRYSRDELYQPTRYNIDLDGNQMELEDLVVDDPHSNLQRRIYDAIFRILPEGFKIIKDVSVGDIVAV IATDELIKDDWIDKANDYIAELNRGL >Mature_186_residues MLVECYDEKGAEVYEMIIKQIFQDLVLGPAVEDLKAFANPDEAVFILAIKMKKTSGVIKFGDVANFTYDKNNNVTKIFIE NENYLPNILKLLWRRYSRDELYQPTRYNIDLDGNQMELEDLVVDDPHSNLQRRIYDAIFRILPEGFKIIKDVSVGDIVAV IATDELIKDDWIDKANDYIAELNRGL
Specific function: Unknown
COG id: COG4051
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016762 [H]
Pfam domain/function: PF09886 DUF2113 [H]
EC number: NA
Molecular weight: Translated: 21513; Mature: 21513
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVECYDEKGAEVYEMIIKQIFQDLVLGPAVEDLKAFANPDEAVFILAIKMKKTSGVIKF CEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEEEEECCCCCEEE GDVANFTYDKNNNVTKIFIENENYLPNILKLLWRRYSRDELYQPTRYNIDLDGNQMELED CCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCHHHCCCCCCEEEEECCCEEEHHH LVVDDPHSNLQRRIYDAIFRILPEGFKIIKDVSVGDIVAVIATDELIKDDWIDKANDYIA EEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEHHHHHHHHHHHHHHHHHH ELNRGL HHHCCC >Mature Secondary Structure MLVECYDEKGAEVYEMIIKQIFQDLVLGPAVEDLKAFANPDEAVFILAIKMKKTSGVIKF CEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEEEEECCCCCEEE GDVANFTYDKNNNVTKIFIENENYLPNILKLLWRRYSRDELYQPTRYNIDLDGNQMELED CCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCHHHCCCCCCEEEEECCCEEEHHH LVVDDPHSNLQRRIYDAIFRILPEGFKIIKDVSVGDIVAVIATDELIKDDWIDKANDYIA EEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEHHHHHHHHHHHHHHHHHH ELNRGL HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]