| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642831
Identifier: 148642831
GI number: 148642831
Start: 730781
End: 731500
Strand: Reverse
Name: 148642831
Synonym: Msm_0771
Alternate gene names: NA
Gene position: 731500-730781 (Counterclockwise)
Preceding gene: 148642832
Following gene: 148642830
Centisome position: 39.47
GC content: 28.33
Gene sequence:
>720_bases ATGGGATTAAAACTAAATTTTAAATTGGATCCAAGAACTAAAATTATAATTTTGGTTTTGATAAGTTTCATGGTTTTTAA TGAAGTGCCGTTATACATTAGTGGAATTTTAGTTTTAATTCCATTTATTTGTTTATTTTTTTCAAATCGTATTGGTATTG CTTTAAGTTATATTTTAATGTATATTGTTGCAAAATATATTCAGATTTATCTTCTTCCAACTGCAACAGGCATAATTGCA ATATTGATGATAATGTTTAGTTATACGACCACTAGAATGTTGCCTGTTTTGATGATGGGGTATTATACAGTCACAACAAC AAAAGTGAGTGAATTTATAGTGTCCATGGAAAAAAGTAATATTCCAAAAGAGGTTACTATTCCGCTTTCAGTTATCTTTA GGTATATTCCGTCAGTTTATGAAGAAATTAAATCAATAACTAATGCAATGAAAATGAGAGGTTTTGGTTTGAATGTTAAA TCATTGAAAAATCCTTTAAAACTGGTGGAATTTTATATGATTCCTATTCTGGTCAGCGCTATTAAAACAGCAGATGAACT TTCTGCAGCTTCTTTAACAAGGGGATTAAGTAATCCTGAACCCAGAACTCATTTTATGGAAGTTAAATTAAATAAAATAG ATTATACATTACTGACAGTTTCATTAATCGGTTTGGGAGTTTATGTATATTATTTTTTAGGTGGTGTCTTTTTTGCTTAA
Upstream 100 bases:
>100_bases GATAATTGCTACATTTGTTGTTGCTTTAATCGGTGCATATATTGGAAAAATTGTTTTGAAAAAACATTTTGAAAAAGCAG GTATTGCCTAAGGTGATATT
Downstream 100 bases:
>100_bases AATAGATAATGTTTCATTTTCATATGACAACAGTAAGAATAACTGTAATCTGGCAGATATTAATCAGAATATTGAAAAAG GTGAAGTCATTCTGCTTTGT
Product: cobalt ABC transporter, permease component, CbiQ
Products: NA
Alternate protein names: ABC-Type Cobalt Transport System Permease Component; ABC Transporter Permease; ABC-Type Cobalt Transport System Permease Component CbiQ; Cobalt ABC Transporter; ABC Transport System Permease Protein; ABC-Type Cobalt Transport System; Cobalt ABC Transporter Permease; Cobalt ABC Transporter Permease Component CbiQ
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MGLKLNFKLDPRTKIIILVLISFMVFNEVPLYISGILVLIPFICLFFSNRIGIALSYILMYIVAKYIQIYLLPTATGIIA ILMIMFSYTTTRMLPVLMMGYYTVTTTKVSEFIVSMEKSNIPKEVTIPLSVIFRYIPSVYEEIKSITNAMKMRGFGLNVK SLKNPLKLVEFYMIPILVSAIKTADELSAASLTRGLSNPEPRTHFMEVKLNKIDYTLLTVSLIGLGVYVYYFLGGVFFA
Sequences:
>Translated_239_residues MGLKLNFKLDPRTKIIILVLISFMVFNEVPLYISGILVLIPFICLFFSNRIGIALSYILMYIVAKYIQIYLLPTATGIIA ILMIMFSYTTTRMLPVLMMGYYTVTTTKVSEFIVSMEKSNIPKEVTIPLSVIFRYIPSVYEEIKSITNAMKMRGFGLNVK SLKNPLKLVEFYMIPILVSAIKTADELSAASLTRGLSNPEPRTHFMEVKLNKIDYTLLTVSLIGLGVYVYYFLGGVFFA >Mature_238_residues GLKLNFKLDPRTKIIILVLISFMVFNEVPLYISGILVLIPFICLFFSNRIGIALSYILMYIVAKYIQIYLLPTATGIIAI LMIMFSYTTTRMLPVLMMGYYTVTTTKVSEFIVSMEKSNIPKEVTIPLSVIFRYIPSVYEEIKSITNAMKMRGFGLNVKS LKNPLKLVEFYMIPILVSAIKTADELSAASLTRGLSNPEPRTHFMEVKLNKIDYTLLTVSLIGLGVYVYYFLGGVFFA
Specific function: Unknown
COG id: COG0619
COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27072; Mature: 26941
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLKLNFKLDPRTKIIILVLISFMVFNEVPLYISGILVLIPFICLFFSNRIGIALSYILM CCEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH YIVAKYIQIYLLPTATGIIAILMIMFSYTTTRMLPVLMMGYYTVTTTKVSEFIVSMEKSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IPKEVTIPLSVIFRYIPSVYEEIKSITNAMKMRGFGLNVKSLKNPLKLVEFYMIPILVSA CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH IKTADELSAASLTRGLSNPEPRTHFMEVKLNKIDYTLLTVSLIGLGVYVYYFLGGVFFA HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GLKLNFKLDPRTKIIILVLISFMVFNEVPLYISGILVLIPFICLFFSNRIGIALSYILM CEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH YIVAKYIQIYLLPTATGIIAILMIMFSYTTTRMLPVLMMGYYTVTTTKVSEFIVSMEKSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IPKEVTIPLSVIFRYIPSVYEEIKSITNAMKMRGFGLNVKSLKNPLKLVEFYMIPILVSA CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH IKTADELSAASLTRGLSNPEPRTHFMEVKLNKIDYTLLTVSLIGLGVYVYYFLGGVFFA HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA