Click here to switch to the map view.

The map label for this gene is yciH [C]

Identifier: 148642814

GI number: 148642814

Start: 717535

End: 717876

Strand: Reverse

Name: yciH [C]

Synonym: Msm_0754

Alternate gene names: 148642814

Gene position: 717876-717535 (Counterclockwise)

Preceding gene: 148642815

Following gene: 148642813

Centisome position: 38.74

GC content: 33.33

Gene sequence:

>342_bases
ATGTCAAAAATCTGTGATGTCTGTGGGCTTCCGGAAGAACTTTGTGTGTGTGAAGAAATTGCACGTGAAGTTCAAACTGT
TAAAGTATTTACAGTAAGGAGAAGATTCGGAAAACTCATGACTATTATCGAAGGTATAGATGAACACGATATTGATATTA
AAGAACTTACAAAAACTCTCAAGGCAAAATGTGCTTGTGGAGGTACTTCTAAAAACGGTCAAATAGAACTTCAAGGGGGT
CATAAAGTAAGAGTCAAAGAAGTTTTATCTGACATGGGTTTTTCATCAGATACAATAGAAATTCGTGAATCTAAAAAAAA
TAATAAAAAAAGAAGAAGGTAA

Upstream 100 bases:

>100_bases
AGCTGCTGGGGTAATTGAAAACCCAGGAAAAATTAGAGAATTGAAAAGAACAATTGCTCGTGTTCTTACAATATTGAATG
AAAAACAGAAGGAGAATTAA

Downstream 100 bases:

>100_bases
TTCATCTCTTCGATACATTTCAATAAAAATTTTATAATTTTTTGCTGATTACAGTTTTTTAAGAGATGCAAATATGATTA
CGGTAAATAATTTAGTCCAT

Product: translation initiation factor Sui1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MSKICDVCGLPEELCVCEEIAREVQTVKVFTVRRRFGKLMTIIEGIDEHDIDIKELTKTLKAKCACGGTSKNGQIELQGG
HKVRVKEVLSDMGFSSDTIEIRESKKNNKKRRR

Sequences:

>Translated_113_residues
MSKICDVCGLPEELCVCEEIAREVQTVKVFTVRRRFGKLMTIIEGIDEHDIDIKELTKTLKAKCACGGTSKNGQIELQGG
HKVRVKEVLSDMGFSSDTIEIRESKKNNKKRRR
>Mature_112_residues
SKICDVCGLPEELCVCEEIAREVQTVKVFTVRRRFGKLMTIIEGIDEHDIDIKELTKTLKAKCACGGTSKNGQIELQGGH
KVRVKEVLSDMGFSSDTIEIRESKKNNKKRRR

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022851
- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 12783; Mature: 12652

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKICDVCGLPEELCVCEEIAREVQTVKVFTVRRRFGKLMTIIEGIDEHDIDIKELTKTL
CCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
KAKCACGGTSKNGQIELQGGHKVRVKEVLSDMGFSSDTIEIRESKKNNKKRRR
HHHHCCCCCCCCCEEEECCCCEEHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SKICDVCGLPEELCVCEEIAREVQTVKVFTVRRRFGKLMTIIEGIDEHDIDIKELTKTL
CCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
KAKCACGGTSKNGQIELQGGHKVRVKEVLSDMGFSSDTIEIRESKKNNKKRRR
HHHHCCCCCCCCCEEEECCCCEEHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]