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The map label for this gene is rpl34e

Identifier: 148642795

GI number: 148642795

Start: 707691

End: 707957

Strand: Reverse

Name: rpl34e

Synonym: Msm_0735

Alternate gene names: 148642795

Gene position: 707957-707691 (Counterclockwise)

Preceding gene: 148642796

Following gene: 148642794

Centisome position: 38.2

GC content: 34.46

Gene sequence:

>267_bases
ATGCCTGCAAACAGATATAGGTCAAGATCATATAAAAGAGTTTATAAAAACACTCCTGGCGGAGAAAATGTTTTAAGATA
CAAAAAGAAAAAACCATCTAAGCATGTTTGTGCTGAATGTGGTAAATTATTACATGGAGTTCCACGTGGACGTCCATATG
AAATTAATAAATTAGCAAAATCCCATAAAAGACCTAACCGTCCATATGGTGGGTATTTATGCTCAAGCTGTGCTCGTAAA
CATTTCAAAAACGAGGCTAGAAAATAA

Upstream 100 bases:

>100_bases
TATTTATTAATAATGAAAACAATATAGTATAATATTCTATTTTGAATACGCTATTACACAATTATTAAATTTATTATTTA
AAATTAATTTAGGTGATTAA

Downstream 100 bases:

>100_bases
TGATAATTACTGTTGGTGGACTGGCTGGAACTGGAACCACAACAACTGCAGAGCTGTTGTCTGAGAAATTAGGTATTCCT
TTTGTTTCTTCAGGCTCTAT

Product: 50S ribosomal protein L34e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MPANRYRSRSYKRVYKNTPGGENVLRYKKKKPSKHVCAECGKLLHGVPRGRPYEINKLAKSHKRPNRPYGGYLCSSCARK
HFKNEARK

Sequences:

>Translated_88_residues
MPANRYRSRSYKRVYKNTPGGENVLRYKKKKPSKHVCAECGKLLHGVPRGRPYEINKLAKSHKRPNRPYGGYLCSSCARK
HFKNEARK
>Mature_87_residues
PANRYRSRSYKRVYKNTPGGENVLRYKKKKPSKHVCAECGKLLHGVPRGRPYEINKLAKSHKRPNRPYGGYLCSSCARKH
FKNEARK

Specific function: Unknown

COG id: COG2174

COG function: function code J; Ribosomal protein L34E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L34e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL34_METS3 (A5UL62)

Other databases:

- EMBL:   CP000678
- RefSeq:   YP_001273308.1
- STRING:   A5UL62
- GeneID:   5217068
- GenomeReviews:   CP000678_GR
- KEGG:   msi:Msm_0735
- eggNOG:   arNOG12906
- HOGENOM:   HBG553083
- OMA:   RRKYVRT
- ProtClustDB:   PRK04059
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00349
- InterPro:   IPR008195
- PANTHER:   PTHR10759
- PRINTS:   PR01250

Pfam domain/function: PF01199 Ribosomal_L34e

EC number: NA

Molecular weight: Translated: 10247; Mature: 10116

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: PS01145 RIBOSOMAL_L34E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPANRYRSRSYKRVYKNTPGGENVLRYKKKKPSKHVCAECGKLLHGVPRGRPYEINKLAK
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH
SHKRPNRPYGGYLCSSCARKHFKNEARK
HHCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PANRYRSRSYKRVYKNTPGGENVLRYKKKKPSKHVCAECGKLLHGVPRGRPYEINKLAK
CCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH
SHKRPNRPYGGYLCSSCARKHFKNEARK
HHCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA