| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is nudG [H]
Identifier: 148642751
GI number: 148642751
Start: 664103
End: 664489
Strand: Reverse
Name: nudG [H]
Synonym: Msm_0691
Alternate gene names: 148642751
Gene position: 664489-664103 (Counterclockwise)
Preceding gene: 148642752
Following gene: 148642750
Centisome position: 35.86
GC content: 31.27
Gene sequence:
>387_bases ATGAAAGAAATAAAAGTAGTGGCAGCTATTATTCAAAAAGAAAACAAAATTTTAGCTACTAAAAGAGGATATGGCGAGTT TATAAACATGTGGGAGTTTCCGGGAGGAAAAATCGAATCAGGTGAAACCAAAGAGCAGGCCCTAGTTCGTGAAATTAAAG AAGAATTAAACATTGAAATTAGTGTTGATAAATTTGCCATAGATATTGAGTATCAGTATCCTAACTTTTATTTATTCATG TCCTGTTTTATGTGTTCAATTAAGGAAGGTTCAATCGAACTTTTAGAGCATAATGATGGTAAATGGATTACAAAAGAAGA ATTAAACACTTTAAATTGGCTTCCGGCAGATATTGATGCAGTTAATTATCTAAAAGAAAACATGTGA
Upstream 100 bases:
>100_bases TTCATTGAAAAATTAAGACTTATATTATTAAAATTAAATGAAGATGATAGAATTATTAAAAAATTAGGGGAATTGGACAT TTAATTCAGGTGTAAAAAAC
Downstream 100 bases:
>100_bases TTTTTATGGATAATCAGAATGATATTTTAGAGGGAGCTAAAACTGCTTTTATCAATGAAACTTATAATCCTGCAAATGAT TTCAAACCTAAATTCCTTTC
Product: mutator mutT protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MKEIKVVAAIIQKENKILATKRGYGEFINMWEFPGGKIESGETKEQALVREIKEELNIEISVDKFAIDIEYQYPNFYLFM SCFMCSIKEGSIELLEHNDGKWITKEELNTLNWLPADIDAVNYLKENM
Sequences:
>Translated_128_residues MKEIKVVAAIIQKENKILATKRGYGEFINMWEFPGGKIESGETKEQALVREIKEELNIEISVDKFAIDIEYQYPNFYLFM SCFMCSIKEGSIELLEHNDGKWITKEELNTLNWLPADIDAVNYLKENM >Mature_128_residues MKEIKVVAAIIQKENKILATKRGYGEFINMWEFPGGKIESGETKEQALVREIKEELNIEISVDKFAIDIEYQYPNFYLFM SCFMCSIKEGSIELLEHNDGKWITKEELNTLNWLPADIDAVNYLKENM
Specific function: Specific for pyrimidine substrates. Acts on 5-methyl- dCTP, CTP and dCTP in decreasing order [H]
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1788056, Length=119, Percent_Identity=36.1344537815126, Blast_Score=80, Evalue=4e-17, Organism=Escherichia coli, GI1786288, Length=127, Percent_Identity=34.6456692913386, Blast_Score=71, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: 3.6.1.-
Molecular weight: Translated: 14917; Mature: 14917
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEIKVVAAIIQKENKILATKRGYGEFINMWEFPGGKIESGETKEQALVREIKEELNIEI CCHHHHHHHHHHCCCCEEEECCCCHHHHEHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEE SVDKFAIDIEYQYPNFYLFMSCFMCSIKEGSIELLEHNDGKWITKEELNTLNWLPADIDA EEEEEEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEHHHCCCCCCCCCCHHH VNYLKENM HHHHHHCC >Mature Secondary Structure MKEIKVVAAIIQKENKILATKRGYGEFINMWEFPGGKIESGETKEQALVREIKEELNIEI CCHHHHHHHHHHCCCCEEEECCCCHHHHEHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEE SVDKFAIDIEYQYPNFYLFMSCFMCSIKEGSIELLEHNDGKWITKEELNTLNWLPADIDA EEEEEEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEHHHCCCCCCCCCCHHH VNYLKENM HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe; Mn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 11053429 [H]