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The map label for this gene is cdc6 [H]

Identifier: 148642731

GI number: 148642731

Start: 647777

End: 648895

Strand: Reverse

Name: cdc6 [H]

Synonym: Msm_0671

Alternate gene names: 148642731

Gene position: 648895-647777 (Counterclockwise)

Preceding gene: 148642732

Following gene: 148642728

Centisome position: 35.02

GC content: 32.71

Gene sequence:

>1119_bases
ATGATAAGTATGGGAATTGAAGATATTTTAATGCATGATGAAAGTCTTTTTCAAAATATAAATGCTTTTGATCCAGATTA
TGTGCCTCCAAATTATAATTATAGGGACAGGCAAATGGAAGCTATGGCAATGGCAATCAGACCGGCTATAAGTGGAGGTC
AACCATCAAATTCCGTTGTTTTAGGTTCATGTGCAACCGGAAAAACAACAGCTATCAGAAAAGTATTTGAATTAGTTGAA
AAGACTACAGAAAAAGTTGTTTGTGTTTATATAAACTGTCAGCTTCATACAACACGTTTTGGAATATTTTCACAAATATA
CAAAAAGTTGTTTGGCCATATTCCTCCGGAAACAGGAGTTCCATTTTCAAGAATTTATGACCAGATCATGCATAAACTTC
AATCAGATAAAAAAGCATTAATCGTTGCATTGGATGATGTCAATTATTTGTTCCAAAGTAAGGCAGCTAATAAAGTATTT
TATGATTTGTTAAGAGCATATGAAGAATATCCTGGTGTTAAAACCGGAATTTTTGCAATATTGTCTGATCTTGAATTCAG
ATATGCCTTTGATAAAAACGTAAACACGGTTTTCATACCTCAGGACATTACATTTCAGCCATATACTTACTCAGAAATTG
AAGATATATTAAGAGACAGGGTAAATGCAGGATTTTTCCCGGGAGTAATGGGTGATGAAATATTGGAATTGGTAGCTATG
CATACCTATGATGTAGGTGATTTGAGAGTAGGTATCAATCTTTTACGCTCTTGCGGTAATATTGCTGAGGCTGATGCCTC
TAGAGAAATCACTGAAGAACATTTCCAAAAAGCAGTTGATTCTTTAGTTTCAGTGCAAATCTCAGAAACTTTAAAATCAT
TAAATGACACCGAAAAGGCATTATTAAAAATAATTTCAGATTCAGATAAGATTTTCACAGCTGGAGAATTATCTGAACTG
TTTAAAGAAAAAGAAAATGTAAGTTATGCTACCTTTAACAGAACCCTTGAAAAATTGGAGTTTTTAAGATTAGTTGATAC
AAAATTCACAGGAAAAGGATCAAGAGGAAATTCCAGAGAAATTATTTTACGTTTTAACCCATGTGATTTCAAATTATGA

Upstream 100 bases:

>100_bases
AAGTATGCAGAATTGTTTACAAAGTGGATTGACGATAATGAGGACGTTAAAATTATTAATTTAAAGTCATAATAATTTTT
TTATAATAGTTTAAATATAA

Downstream 100 bases:

>100_bases
AATTCATTTCCATCTTTTAAGTTGTGGAAATGCTTCATTTAACATTTTTCTAGCTGTTTTTTCATCCATATCTGTATTTT
CGACAGTTTTCGGAACACAA

Product: cell division control protein 6

Products: NA

Alternate protein names: CDC6 homolog 2 [H]

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MISMGIEDILMHDESLFQNINAFDPDYVPPNYNYRDRQMEAMAMAIRPAISGGQPSNSVVLGSCATGKTTAIRKVFELVE
KTTEKVVCVYINCQLHTTRFGIFSQIYKKLFGHIPPETGVPFSRIYDQIMHKLQSDKKALIVALDDVNYLFQSKAANKVF
YDLLRAYEEYPGVKTGIFAILSDLEFRYAFDKNVNTVFIPQDITFQPYTYSEIEDILRDRVNAGFFPGVMGDEILELVAM
HTYDVGDLRVGINLLRSCGNIAEADASREITEEHFQKAVDSLVSVQISETLKSLNDTEKALLKIISDSDKIFTAGELSEL
FKEKENVSYATFNRTLEKLEFLRLVDTKFTGKGSRGNSREIILRFNPCDFKL

Sequences:

>Translated_372_residues
MISMGIEDILMHDESLFQNINAFDPDYVPPNYNYRDRQMEAMAMAIRPAISGGQPSNSVVLGSCATGKTTAIRKVFELVE
KTTEKVVCVYINCQLHTTRFGIFSQIYKKLFGHIPPETGVPFSRIYDQIMHKLQSDKKALIVALDDVNYLFQSKAANKVF
YDLLRAYEEYPGVKTGIFAILSDLEFRYAFDKNVNTVFIPQDITFQPYTYSEIEDILRDRVNAGFFPGVMGDEILELVAM
HTYDVGDLRVGINLLRSCGNIAEADASREITEEHFQKAVDSLVSVQISETLKSLNDTEKALLKIISDSDKIFTAGELSEL
FKEKENVSYATFNRTLEKLEFLRLVDTKFTGKGSRGNSREIILRFNPCDFKL
>Mature_372_residues
MISMGIEDILMHDESLFQNINAFDPDYVPPNYNYRDRQMEAMAMAIRPAISGGQPSNSVVLGSCATGKTTAIRKVFELVE
KTTEKVVCVYINCQLHTTRFGIFSQIYKKLFGHIPPETGVPFSRIYDQIMHKLQSDKKALIVALDDVNYLFQSKAANKVF
YDLLRAYEEYPGVKTGIFAILSDLEFRYAFDKNVNTVFIPQDITFQPYTYSEIEDILRDRVNAGFFPGVMGDEILELVAM
HTYDVGDLRVGINLLRSCGNIAEADASREITEEHFQKAVDSLVSVQISETLKSLNDTEKALLKIISDSDKIFTAGELSEL
FKEKENVSYATFNRTLEKLEFLRLVDTKFTGKGSRGNSREIILRFNPCDFKL

Specific function: Might be involved in the initiation of DNA replication [H]

COG id: COG1474

COG function: function code LO; Cdc6-related protein, AAA superfamily ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDC6/cdc18 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014277 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42219; Mature: 42219

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISMGIEDILMHDESLFQNINAFDPDYVPPNYNYRDRQMEAMAMAIRPAISGGQPSNSVV
CCCCCHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEE
LGSCATGKTTAIRKVFELVEKTTEKVVCVYINCQLHTTRFGIFSQIYKKLFGHIPPETGV
EEECCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCC
PFSRIYDQIMHKLQSDKKALIVALDDVNYLFQSKAANKVFYDLLRAYEEYPGVKTGIFAI
CHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LSDLEFRYAFDKNVNTVFIPQDITFQPYTYSEIEDILRDRVNAGFFPGVMGDEILELVAM
HHHHHHEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
HTYDVGDLRVGINLLRSCGNIAEADASREITEEHFQKAVDSLVSVQISETLKSLNDTEKA
HCCCCCHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LLKIISDSDKIFTAGELSELFKEKENVSYATFNRTLEKLEFLRLVDTKFTGKGSRGNSRE
HHHHHCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
IILRFNPCDFKL
EEEEECCCCCCC
>Mature Secondary Structure
MISMGIEDILMHDESLFQNINAFDPDYVPPNYNYRDRQMEAMAMAIRPAISGGQPSNSVV
CCCCCHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEE
LGSCATGKTTAIRKVFELVEKTTEKVVCVYINCQLHTTRFGIFSQIYKKLFGHIPPETGV
EEECCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCC
PFSRIYDQIMHKLQSDKKALIVALDDVNYLFQSKAANKVFYDLLRAYEEYPGVKTGIFAI
CHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LSDLEFRYAFDKNVNTVFIPQDITFQPYTYSEIEDILRDRVNAGFFPGVMGDEILELVAM
HHHHHHEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
HTYDVGDLRVGINLLRSCGNIAEADASREITEEHFQKAVDSLVSVQISETLKSLNDTEKA
HCCCCCHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LLKIISDSDKIFTAGELSELFKEKENVSYATFNRTLEKLEFLRLVDTKFTGKGSRGNSRE
HHHHHCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
IILRFNPCDFKL
EEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463; 11514535 [H]