Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

Click here to switch to the map view.

The map label for this gene is 148642724

Identifier: 148642724

GI number: 148642724

Start: 643271

End: 643840

Strand: Reverse

Name: 148642724

Synonym: Msm_0664

Alternate gene names: NA

Gene position: 643840-643271 (Counterclockwise)

Preceding gene: 148642725

Following gene: 148642723

Centisome position: 34.74

GC content: 37.37

Gene sequence:

>570_bases
ATGGCAAAAGTTATATTATTAAATTCCAGTCCTCGAGCTAACAGTAACACTCAGGATGTTCTGGAAGTTTGTGCTGAAGA
AATTGAGAAAAATGGTGTTGAAGCTGAAATCATATCCTTAAGAGGAAAACAGATACAGTCATGTGTTGCATGTAACGGAT
GTGCAAAAACAGGAAATTGTGTTTTAAATGACGGTTTGGATGAAATCATTGAAAAAATCAGACAGGCTGACGGATTTATT
CCTGCAGCACCAGTTTACTTTGGAACTGCAAGAGGAGACATAATGGCTGCTCTTCAAAGGATAGGTAAAGTTTCAAGAGG
AAACGACAAATTTTTAGAATGGATGGTTGGAGGTCCGATTGCTGTTGCAAGGCGTGGAGGACAGACTTTAACCTTACAGG
AAATGACAATGTTTTTCCCGATTAACAATATGATAATAGCCGGAAGTACTTACTGGAACATGGTATTTGCAGGTCCTGAA
GGTACAGCTTTAGATGACAGTGAAGGAATAGCCACTATTAAGTTATTTGGTCAGAATGTTGCCAATATAATTAAAAAATT
AGTTGATTAA

Upstream 100 bases:

>100_bases
GATTGTCCTTGTCGCCATGCTTTAAATGGTGCTGAAGTTTAAATTCTTTTTTCAAAAAGATTTATTATTTATTTAACAAA
ATTTTATTTAGGTTGATGTT

Downstream 100 bases:

>100_bases
AATGAGAATTGCACTTGCATCTTCCAATGGAGATATTGTTGATTTGCATTTAGGAAAAGCAGTATCATTAGTTATTTATG
ATGTAGTTGACAATGACTTT

Product: NADPH-dependent FMN reductase family multimeric flavodoxin

Products: NA

Alternate protein names: Isf-2; MCJ-2; Mj2 [H]

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MAKVILLNSSPRANSNTQDVLEVCAEEIEKNGVEAEIISLRGKQIQSCVACNGCAKTGNCVLNDGLDEIIEKIRQADGFI
PAAPVYFGTARGDIMAALQRIGKVSRGNDKFLEWMVGGPIAVARRGGQTLTLQEMTMFFPINNMIIAGSTYWNMVFAGPE
GTALDDSEGIATIKLFGQNVANIIKKLVD

Sequences:

>Translated_189_residues
MAKVILLNSSPRANSNTQDVLEVCAEEIEKNGVEAEIISLRGKQIQSCVACNGCAKTGNCVLNDGLDEIIEKIRQADGFI
PAAPVYFGTARGDIMAALQRIGKVSRGNDKFLEWMVGGPIAVARRGGQTLTLQEMTMFFPINNMIIAGSTYWNMVFAGPE
GTALDDSEGIATIKLFGQNVANIIKKLVD
>Mature_188_residues
AKVILLNSSPRANSNTQDVLEVCAEEIEKNGVEAEIISLRGKQIQSCVACNGCAKTGNCVLNDGLDEIIEKIRQADGFIP
AAPVYFGTARGDIMAALQRIGKVSRGNDKFLEWMVGGPIAVARRGGQTLTLQEMTMFFPINNMIIAGSTYWNMVFAGPEG
TALDDSEGIATIKLFGQNVANIIKKLVD

Specific function: Redox-active protein probably involved in electron transport [H]

COG id: COG0655

COG function: function code R; Multimeric flavodoxin WrbA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ssuE family. Isf subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 20340; Mature: 20209

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVILLNSSPRANSNTQDVLEVCAEEIEKNGVEAEIISLRGKQIQSCVACNGCAKTGNC
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCCE
VLNDGLDEIIEKIRQADGFIPAAPVYFGTARGDIMAALQRIGKVSRGNDKFLEWMVGGPI
EEECCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCE
AVARRGGQTLTLQEMTMFFPINNMIIAGSTYWNMVFAGPEGTALDDSEGIATIKLFGQNV
EEEECCCCEEEHHHHHEEEECCCEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEHHHHH
ANIIKKLVD
HHHHHHHCC
>Mature Secondary Structure 
AKVILLNSSPRANSNTQDVLEVCAEEIEKNGVEAEIISLRGKQIQSCVACNGCAKTGNC
CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCCE
VLNDGLDEIIEKIRQADGFIPAAPVYFGTARGDIMAALQRIGKVSRGNDKFLEWMVGGPI
EEECCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCE
AVARRGGQTLTLQEMTMFFPINNMIIAGSTYWNMVFAGPEGTALDDSEGIATIKLFGQNV
EEEECCCCEEEHHHHHEEEECCCEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEHHHHH
ANIIKKLVD
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]