| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
Click here to switch to the map view.
The map label for this gene is 148642724
Identifier: 148642724
GI number: 148642724
Start: 643271
End: 643840
Strand: Reverse
Name: 148642724
Synonym: Msm_0664
Alternate gene names: NA
Gene position: 643840-643271 (Counterclockwise)
Preceding gene: 148642725
Following gene: 148642723
Centisome position: 34.74
GC content: 37.37
Gene sequence:
>570_bases ATGGCAAAAGTTATATTATTAAATTCCAGTCCTCGAGCTAACAGTAACACTCAGGATGTTCTGGAAGTTTGTGCTGAAGA AATTGAGAAAAATGGTGTTGAAGCTGAAATCATATCCTTAAGAGGAAAACAGATACAGTCATGTGTTGCATGTAACGGAT GTGCAAAAACAGGAAATTGTGTTTTAAATGACGGTTTGGATGAAATCATTGAAAAAATCAGACAGGCTGACGGATTTATT CCTGCAGCACCAGTTTACTTTGGAACTGCAAGAGGAGACATAATGGCTGCTCTTCAAAGGATAGGTAAAGTTTCAAGAGG AAACGACAAATTTTTAGAATGGATGGTTGGAGGTCCGATTGCTGTTGCAAGGCGTGGAGGACAGACTTTAACCTTACAGG AAATGACAATGTTTTTCCCGATTAACAATATGATAATAGCCGGAAGTACTTACTGGAACATGGTATTTGCAGGTCCTGAA GGTACAGCTTTAGATGACAGTGAAGGAATAGCCACTATTAAGTTATTTGGTCAGAATGTTGCCAATATAATTAAAAAATT AGTTGATTAA
Upstream 100 bases:
>100_bases GATTGTCCTTGTCGCCATGCTTTAAATGGTGCTGAAGTTTAAATTCTTTTTTCAAAAAGATTTATTATTTATTTAACAAA ATTTTATTTAGGTTGATGTT
Downstream 100 bases:
>100_bases AATGAGAATTGCACTTGCATCTTCCAATGGAGATATTGTTGATTTGCATTTAGGAAAAGCAGTATCATTAGTTATTTATG ATGTAGTTGACAATGACTTT
Product: NADPH-dependent FMN reductase family multimeric flavodoxin
Products: NA
Alternate protein names: Isf-2; MCJ-2; Mj2 [H]
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MAKVILLNSSPRANSNTQDVLEVCAEEIEKNGVEAEIISLRGKQIQSCVACNGCAKTGNCVLNDGLDEIIEKIRQADGFI PAAPVYFGTARGDIMAALQRIGKVSRGNDKFLEWMVGGPIAVARRGGQTLTLQEMTMFFPINNMIIAGSTYWNMVFAGPE GTALDDSEGIATIKLFGQNVANIIKKLVD
Sequences:
>Translated_189_residues MAKVILLNSSPRANSNTQDVLEVCAEEIEKNGVEAEIISLRGKQIQSCVACNGCAKTGNCVLNDGLDEIIEKIRQADGFI PAAPVYFGTARGDIMAALQRIGKVSRGNDKFLEWMVGGPIAVARRGGQTLTLQEMTMFFPINNMIIAGSTYWNMVFAGPE GTALDDSEGIATIKLFGQNVANIIKKLVD >Mature_188_residues AKVILLNSSPRANSNTQDVLEVCAEEIEKNGVEAEIISLRGKQIQSCVACNGCAKTGNCVLNDGLDEIIEKIRQADGFIP AAPVYFGTARGDIMAALQRIGKVSRGNDKFLEWMVGGPIAVARRGGQTLTLQEMTMFFPINNMIIAGSTYWNMVFAGPEG TALDDSEGIATIKLFGQNVANIIKKLVD
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 20340; Mature: 20209
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVILLNSSPRANSNTQDVLEVCAEEIEKNGVEAEIISLRGKQIQSCVACNGCAKTGNC CCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCCE VLNDGLDEIIEKIRQADGFIPAAPVYFGTARGDIMAALQRIGKVSRGNDKFLEWMVGGPI EEECCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCE AVARRGGQTLTLQEMTMFFPINNMIIAGSTYWNMVFAGPEGTALDDSEGIATIKLFGQNV EEEECCCCEEEHHHHHEEEECCCEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEHHHHH ANIIKKLVD HHHHHHHCC >Mature Secondary Structure AKVILLNSSPRANSNTQDVLEVCAEEIEKNGVEAEIISLRGKQIQSCVACNGCAKTGNC CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCCE VLNDGLDEIIEKIRQADGFIPAAPVYFGTARGDIMAALQRIGKVSRGNDKFLEWMVGGPI EEECCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCE AVARRGGQTLTLQEMTMFFPINNMIIAGSTYWNMVFAGPEGTALDDSEGIATIKLFGQNV EEEECCCCEEEHHHHHEEEECCCEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEHHHHH ANIIKKLVD HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]