| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
Click here to switch to the map view.
The map label for this gene is 148642699
Identifier: 148642699
GI number: 148642699
Start: 617485
End: 618447
Strand: Reverse
Name: 148642699
Synonym: Msm_0639
Alternate gene names: NA
Gene position: 618447-617485 (Counterclockwise)
Preceding gene: 148642700
Following gene: 148642698
Centisome position: 33.37
GC content: 34.27
Gene sequence:
>963_bases ATGTTGTATACAGGTATGATTGAAGCATTTATTATTGTATTTATTTTATCAGCTGTAGGTTCACTGGTTTTAAATATGGT ATTTCGCTTTTTTGGTAAAAAAGGTTATTTGGGTAACTTGTATCCAAATGTACGTGGTGGAATTCCTCGAGCTATAGGTT TAGTTCCATTTATTATATTGTGTTTCTTTTTCTTACCGGAATATAATACATTAGTTTTAATTATGGGTCTTTTTGCATTT TTGGATGATGTTTTGGGAAGAACTCCTTCTCCAATTGGTATTGAGTGGGGTCAACTTTTCAGAGGTATTGGAATGCTTTT TGTTATGATTGCAGGATTCTATTCCGGAATGGGTTTATCTTCAATTTTCATTGCATTGCTGGTACAGCCTATTAACATTT CTGATATGCAGCCGGGATCAACCTGTATGGTTACAGTCATCATGTCTGTTGTAAGTATAATCTGTATGCTGATTGTCGGA TCTCCGCAAGTTTCAGAATTGCCTGCTATTTACACTCCTTTATTATTGATAATTGTTTGTATAGCATATTCTCCATTGGA TTTTGCTGGAAAAATCATGTTGGGGGAAGTTGGAAACCATTCATTTGCAGTTGCATTGGGAATTTGTTTCTATTTAATCG GAGGATTCTGGTGGGTAATTGCACTATCTTTTGTGACTGTATGTCTTACAGCATTTGTTAGAAGAAGCACTCTTAAAGTA TTTTTCAACCAAAGATTGGGCATTTTAAATCCGACATTTGGAGATTTCTTCATGGATGTTTTAACTGGTGGCGGATTGGG AGATTTATTCAGAAGAATCATATTAAAAACAAAACAGTATGATGTGGAAAATCCGACTTTGATAAAATTAGGATTTAGAA GACTTCTTTATAATCCTTATGCTCCAACTCATGGCAGTCATGAACAGAAAAAATCATATAAAGTAAGACTTGACGGGAGT TAA
Upstream 100 bases:
>100_bases TTTTTTAAATAAAGATTTATATAATATTAATTATTATAAGTTATAACTAGTAACAATATTAAAAAATGACTATATTTTTT AATGAAAAACTGTGATTAAC
Downstream 100 bases:
>100_bases AATATTATGAAGGCATTAATTGTAATTACTGGTAGGGGACTTGGAGGAGATTCAGTTATAGCATACAATATAATTGAAGG TCTTGAAGCCAAGGGAGTTC
Product: putative cell wall biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MLYTGMIEAFIIVFILSAVGSLVLNMVFRFFGKKGYLGNLYPNVRGGIPRAIGLVPFIILCFFFLPEYNTLVLIMGLFAF LDDVLGRTPSPIGIEWGQLFRGIGMLFVMIAGFYSGMGLSSIFIALLVQPINISDMQPGSTCMVTVIMSVVSIICMLIVG SPQVSELPAIYTPLLLIIVCIAYSPLDFAGKIMLGEVGNHSFAVALGICFYLIGGFWWVIALSFVTVCLTAFVRRSTLKV FFNQRLGILNPTFGDFFMDVLTGGGLGDLFRRIILKTKQYDVENPTLIKLGFRRLLYNPYAPTHGSHEQKKSYKVRLDGS
Sequences:
>Translated_320_residues MLYTGMIEAFIIVFILSAVGSLVLNMVFRFFGKKGYLGNLYPNVRGGIPRAIGLVPFIILCFFFLPEYNTLVLIMGLFAF LDDVLGRTPSPIGIEWGQLFRGIGMLFVMIAGFYSGMGLSSIFIALLVQPINISDMQPGSTCMVTVIMSVVSIICMLIVG SPQVSELPAIYTPLLLIIVCIAYSPLDFAGKIMLGEVGNHSFAVALGICFYLIGGFWWVIALSFVTVCLTAFVRRSTLKV FFNQRLGILNPTFGDFFMDVLTGGGLGDLFRRIILKTKQYDVENPTLIKLGFRRLLYNPYAPTHGSHEQKKSYKVRLDGS >Mature_320_residues MLYTGMIEAFIIVFILSAVGSLVLNMVFRFFGKKGYLGNLYPNVRGGIPRAIGLVPFIILCFFFLPEYNTLVLIMGLFAF LDDVLGRTPSPIGIEWGQLFRGIGMLFVMIAGFYSGMGLSSIFIALLVQPINISDMQPGSTCMVTVIMSVVSIICMLIVG SPQVSELPAIYTPLLLIIVCIAYSPLDFAGKIMLGEVGNHSFAVALGICFYLIGGFWWVIALSFVTVCLTAFVRRSTLKV FFNQRLGILNPTFGDFFMDVLTGGGLGDLFRRIILKTKQYDVENPTLIKLGFRRLLYNPYAPTHGSHEQKKSYKVRLDGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35404; Mature: 35404
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYTGMIEAFIIVFILSAVGSLVLNMVFRFFGKKGYLGNLYPNVRGGIPRAIGLVPFIIL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH CFFFLPEYNTLVLIMGLFAFLDDVLGRTPSPIGIEWGQLFRGIGMLFVMIAGFYSGMGLS HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH SIFIALLVQPINISDMQPGSTCMVTVIMSVVSIICMLIVGSPQVSELPAIYTPLLLIIVC HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCHHHHHHHHHHHHH IAYSPLDFAGKIMLGEVGNHSFAVALGICFYLIGGFWWVIALSFVTVCLTAFVRRSTLKV HHCCCCCHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFNQRLGILNPTFGDFFMDVLTGGGLGDLFRRIILKTKQYDVENPTLIKLGFRRLLYNPY HHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC APTHGSHEQKKSYKVRLDGS CCCCCCCHHHCCEEEEECCC >Mature Secondary Structure MLYTGMIEAFIIVFILSAVGSLVLNMVFRFFGKKGYLGNLYPNVRGGIPRAIGLVPFIIL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH CFFFLPEYNTLVLIMGLFAFLDDVLGRTPSPIGIEWGQLFRGIGMLFVMIAGFYSGMGLS HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH SIFIALLVQPINISDMQPGSTCMVTVIMSVVSIICMLIVGSPQVSELPAIYTPLLLIIVC HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCHHHHHHHHHHHHH IAYSPLDFAGKIMLGEVGNHSFAVALGICFYLIGGFWWVIALSFVTVCLTAFVRRSTLKV HHCCCCCHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFNQRLGILNPTFGDFFMDVLTGGGLGDLFRRIILKTKQYDVENPTLIKLGFRRLLYNPY HHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC APTHGSHEQKKSYKVRLDGS CCCCCCCHHHCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA