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The map label for this gene is secE

Identifier: 148642685

GI number: 148642685

Start: 605300

End: 605479

Strand: Reverse

Name: secE

Synonym: Msm_0625

Alternate gene names: 148642685

Gene position: 605479-605300 (Counterclockwise)

Preceding gene: 148642686

Following gene: 148642684

Centisome position: 32.67

GC content: 27.22

Gene sequence:

>180_bases
ATGAATGTTCAAGAACGTTTTGATAAAACTATTAAAGATTGTAAAAGGGTATTGAAAGTATCAAGAAAACCGGACAAACA
GGAATATTTGGAATTTTCAAAAATTGTAGCAATTGGAATTGCTATTATTGGTGTTGTTGGGTTTATAATTGTATTAATCG
GTGAATTAATAGGATTATAA

Upstream 100 bases:

>100_bases
TATTAATAAATAAAATTAAAAATTATTTCATTACTATTATTTTATTATAATTCACTACTATGGGATTAAATTCTGTAGTT
TTTTATTAAAGGGTATTTAT

Downstream 100 bases:

>100_bases
TTAATTCAGTTTTACAAATTTAATCTCAGGAAATTATAATAAAATTTAATTTGTAATGTTAATTTTATTTCAAAATTTAA
TTTTTTGAAAACTTTAAATA

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: Protein transport protein Sec61 gamma subunit homolog

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MNVQERFDKTIKDCKRVLKVSRKPDKQEYLEFSKIVAIGIAIIGVVGFIIVLIGELIGL

Sequences:

>Translated_59_residues
MNVQERFDKTIKDCKRVLKVSRKPDKQEYLEFSKIVAIGIAIIGVVGFIIVLIGELIGL
>Mature_59_residues
MNVQERFDKTIKDCKRVLKVSRKPDKQEYLEFSKIVAIGIAIIGVVGFIIVLIGELIGL

Specific function: Involved in protein export

COG id: COG2443

COG function: function code U; Preprotein translocase subunit Sss1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SECE_METS3 (A5UKV2)

Other databases:

- EMBL:   CP000678
- RefSeq:   YP_001273198.1
- ProteinModelPortal:   A5UKV2
- SMR:   A5UKV2
- STRING:   A5UKV2
- GeneID:   5217350
- GenomeReviews:   CP000678_GR
- KEGG:   msi:Msm_0625
- OMA:   WDEYIES
- ProtClustDB:   PRK09400
- HAMAP:   MF_00422
- InterPro:   IPR001901
- InterPro:   IPR022943
- InterPro:   IPR008158
- TIGRFAMs:   TIGR00327

Pfam domain/function: PF00584 SecE; SSF103456 SecE_euk_arc

EC number: NA

Molecular weight: Translated: 6646; Mature: 6646

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x17495770)-;

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVQERFDKTIKDCKRVLKVSRKPDKQEYLEFSKIVAIGIAIIGVVGFIIVLIGELIGL
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MNVQERFDKTIKDCKRVLKVSRKPDKQEYLEFSKIVAIGIAIIGVVGFIIVLIGELIGL
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA