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The map label for this gene is rplP0

Identifier: 148642681

GI number: 148642681

Start: 602282

End: 603289

Strand: Reverse

Name: rplP0

Synonym: Msm_0621

Alternate gene names: 148642681

Gene position: 603289-602282 (Counterclockwise)

Preceding gene: 148642682

Following gene: 148642680

Centisome position: 32.55

GC content: 36.51

Gene sequence:

>1008_bases
ATGGCTCATGTTGCTGAATGGAAAAAAGAAGAAGTTAATGAGCTTAAATCTTTAATTGATAAATATGATGTTATCGGGAT
TGTAGATTTATTAAACATTCCTGCAAAACAGCTTCAAGAAATGAGGAAATCTCTTCATAACAAAGCTGTCATCAGAATGT
CAAAAAAGAATCTTATTGATTTAGCTCTCGAAGATTGTAATGCTAGTAAAAACAACATTGTTGATTTATCAGAGCATATG
GAAGGTCAAGTTGCAGTTATTGCAACTGAAATGAATCCTTTCAAATTGTATAAAATATTAGAAGACAGTAAAACTTCAGC
TCCTGCTAAACCAGGTGCTATTGCTACTGATGATATTGTTATACCTGAAGGAGACACAGGTTTTGAACCAGGTCCATTCC
TCGGTGAATTACAACAAGTTGGAATTCCAGCTAAAATTGATAAAGGTAAAATTGTTGTTTCTAAAGAAACCGTTCTTGTA
GAAGCAGGTGAAGAAGTATCTGCTGCTGTTGCAAGTACTTTATCAAGAATGGATATTAATCCTATGGAAGTTGGGATCGA
TTTAAGAGCAGTATACGAAGAAGAAGCAATTTATACTTCTGAAGTACTCGCAATCGACGAAGAACAAACTTTAGCAGATG
TTCAAAATGCATTCAGAAATGCATTCAACTTGTCTGTTAATGCAGCTATTCCTACAGAGGAAACTATTTCCACAATCATT
ACTCTTGCTTATACCAGAGCAATCAATGTTGGTGTTGATGCAGCAATAATGACTTCTGAAACCTCAGAGCCAATAATTGG
TCTCGCACAAGCTAAAATGTTAGCTTTAGCATCCGAAGTATCAGGTACTGAAGGAGCTTTAGATGATGAATTAGCTGAAA
AACTTTCTAACGTAGCAGTTGCAGCAGCTCCTGTTGTTGAAGAAACTGTTGAGGAAGAAGAGGAAGAAGAAGAGGAAGAA
GATGCAGAAGAAGAAGCAGCAGCTGGGTTAGGGGCTCTCTTCGGTTAA

Upstream 100 bases:

>100_bases
CTGTTCTTACAGTCTTAGACCGCCATTTAGATAAAGGAAGAAATCAAATTAAATCCATGTTTATTAAAACAACTATGGGT
CCAATAGTGAGGGTGATCTA

Downstream 100 bases:

>100_bases
AATAATTAATTAAAATTTTTTATTATTATAAACCTTACAAATTAGATTATAAAACTAATGGTGATAACATGGAATATATA
TATGCGGCAATGATTTTGCA

Product: acidic ribosomal protein P0

Products: NA

Alternate protein names: L10E

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MAHVAEWKKEEVNELKSLIDKYDVIGIVDLLNIPAKQLQEMRKSLHNKAVIRMSKKNLIDLALEDCNASKNNIVDLSEHM
EGQVAVIATEMNPFKLYKILEDSKTSAPAKPGAIATDDIVIPEGDTGFEPGPFLGELQQVGIPAKIDKGKIVVSKETVLV
EAGEEVSAAVASTLSRMDINPMEVGIDLRAVYEEEAIYTSEVLAIDEEQTLADVQNAFRNAFNLSVNAAIPTEETISTII
TLAYTRAINVGVDAAIMTSETSEPIIGLAQAKMLALASEVSGTEGALDDELAEKLSNVAVAAAPVVEETVEEEEEEEEEE
DAEEEAAAGLGALFG

Sequences:

>Translated_335_residues
MAHVAEWKKEEVNELKSLIDKYDVIGIVDLLNIPAKQLQEMRKSLHNKAVIRMSKKNLIDLALEDCNASKNNIVDLSEHM
EGQVAVIATEMNPFKLYKILEDSKTSAPAKPGAIATDDIVIPEGDTGFEPGPFLGELQQVGIPAKIDKGKIVVSKETVLV
EAGEEVSAAVASTLSRMDINPMEVGIDLRAVYEEEAIYTSEVLAIDEEQTLADVQNAFRNAFNLSVNAAIPTEETISTII
TLAYTRAINVGVDAAIMTSETSEPIIGLAQAKMLALASEVSGTEGALDDELAEKLSNVAVAAAPVVEETVEEEEEEEEEE
DAEEEAAAGLGALFG
>Mature_334_residues
AHVAEWKKEEVNELKSLIDKYDVIGIVDLLNIPAKQLQEMRKSLHNKAVIRMSKKNLIDLALEDCNASKNNIVDLSEHME
GQVAVIATEMNPFKLYKILEDSKTSAPAKPGAIATDDIVIPEGDTGFEPGPFLGELQQVGIPAKIDKGKIVVSKETVLVE
AGEEVSAAVASTLSRMDINPMEVGIDLRAVYEEEAIYTSEVLAIDEEQTLADVQNAFRNAFNLSVNAAIPTEETISTIIT
LAYTRAINVGVDAAIMTSETSEPIIGLAQAKMLALASEVSGTEGALDDELAEKLSNVAVAAAPVVEETVEEEEEEEEEED
AEEEAAAGLGALFG

Specific function: Ribosomal protein P0 is the functional equivalent of E.coli protein L10

COG id: COG0244

COG function: function code J; Ribosomal protein L10

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L10P family

Homologues:

Organism=Homo sapiens, GI4506667, Length=249, Percent_Identity=28.5140562248996, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI16933546, Length=249, Percent_Identity=28.5140562248996, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17506815, Length=235, Percent_Identity=28.5106382978723, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17533073, Length=189, Percent_Identity=22.2222222222222, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6323371, Length=260, Percent_Identity=25.3846153846154, Blast_Score=91, Evalue=3e-19,
Organism=Drosophila melanogaster, GI17737731, Length=228, Percent_Identity=29.8245614035088, Blast_Score=112, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RLA0_METS3 (A5UKU8)

Other databases:

- EMBL:   CP000678
- RefSeq:   YP_001273194.1
- ProteinModelPortal:   A5UKU8
- SMR:   A5UKU8
- STRING:   A5UKU8
- GeneID:   5217346
- GenomeReviews:   CP000678_GR
- KEGG:   msi:Msm_0621
- eggNOG:   arNOG04753
- HOGENOM:   HBG731512
- OMA:   GKNTMIR
- ProtClustDB:   PRK04019
- GO:   GO:0005840
- HAMAP:   MF_00280
- InterPro:   IPR001813
- InterPro:   IPR001790
- InterPro:   IPR013522
- InterPro:   IPR022909
- Gene3D:   G3DSA:1.10.10.380

Pfam domain/function: PF00428 Ribosomal_60s; PF00466 Ribosomal_L10

EC number: NA

Molecular weight: Translated: 35996; Mature: 35865

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHVAEWKKEEVNELKSLIDKYDVIGIVDLLNIPAKQLQEMRKSLHNKAVIRMSKKNLID
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCHHHHH
LALEDCNASKNNIVDLSEHMEGQVAVIATEMNPFKLYKILEDSKTSAPAKPGAIATDDIV
HHHHHCCCCCCCEEEHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCEE
IPEGDTGFEPGPFLGELQQVGIPAKIDKGKIVVSKETVLVEAGEEVSAAVASTLSRMDIN
ECCCCCCCCCCCHHHHHHHCCCCCEECCCEEEEECCEEEEECCCHHHHHHHHHHHHCCCC
PMEVGIDLRAVYEEEAIYTSEVLAIDEEQTLADVQNAFRNAFNLSVNAAIPTEETISTII
HHHCCCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHH
TLAYTRAINVGVDAAIMTSETSEPIIGLAQAKMLALASEVSGTEGALDDELAEKLSNVAV
HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
AAAPVVEETVEEEEEEEEEEDAEEEAAAGLGALFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AHVAEWKKEEVNELKSLIDKYDVIGIVDLLNIPAKQLQEMRKSLHNKAVIRMSKKNLID
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCHHHHH
LALEDCNASKNNIVDLSEHMEGQVAVIATEMNPFKLYKILEDSKTSAPAKPGAIATDDIV
HHHHHCCCCCCCEEEHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCEE
IPEGDTGFEPGPFLGELQQVGIPAKIDKGKIVVSKETVLVEAGEEVSAAVASTLSRMDIN
ECCCCCCCCCCCHHHHHHHCCCCCEECCCEEEEECCEEEEECCCHHHHHHHHHHHHCCCC
PMEVGIDLRAVYEEEAIYTSEVLAIDEEQTLADVQNAFRNAFNLSVNAAIPTEETISTII
HHHCCCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHH
TLAYTRAINVGVDAAIMTSETSEPIIGLAQAKMLALASEVSGTEGALDDELAEKLSNVAV
HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
AAAPVVEETVEEEEEEEEEEDAEEEAAAGLGALFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA