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The map label for this gene is 148642656

Identifier: 148642656

GI number: 148642656

Start: 568478

End: 569395

Strand: Reverse

Name: 148642656

Synonym: Msm_0596

Alternate gene names: NA

Gene position: 569395-568478 (Counterclockwise)

Preceding gene: 148642657

Following gene: 148642650

Centisome position: 30.73

GC content: 29.19

Gene sequence:

>918_bases
ATGTTTGGTAATTTCTTTATAAAGGTAGCGGATGTGTTTTTAAATATTTTTGATTTTTTTAAGAATTTCAATTTTAAAAA
TCTTAAACTTCCCAAAAGGAATAAAACAAAAAAAGAGATTAATCCAAAATTATTTACCAAATTGAATTTCAGTGAAGTTA
AAAAACAGAAGGACATTCAAAATAAATTATTCAATAAGCTGCGGAAAATCTTTTTAAAATATTTTTTAGGTAAAAAAACA
ATAGCTACTGAGATTTTAATGTTTTTGGTTCTGTTTGCAATTGCAGGTTTTGAAATCGCTGGAATTTATTTAACTTCAAT
AGTTATGATTTATATTTTTATGCTGTATTTTCCAAAAATCAGCCAGAAACATCAGTATGATGACTTAAATTTTGAGTTGC
CTTATGCTTTGAGGCATATGGCAACTGAACTGAAAGCAGGAAAAGGGTTGCATGACACGCTGCTTACAGTATCTATTGCA
AATTATGGGTCTCTTTCCGGTGAGTTTAAAAGAGTTTTAAAAGAGATTAAATACGGTAAATCAAGTGAAGATGCACTGAT
GGAAATGTCACTAAGAGTATCGTCAGAAGGTTTGTCAAGGGCAGTTCATCAGATTGTAGGAACTTTAAGGGTTGGTGGAA
ACCTGGCCAATAGCTTAAATGTTATTGCTGAAGATATTTCATTTGATATGCAGATTAAACTAAAAGAATATTCTCAAAAA
TTAAATGGATTTATCTTAATTTATACATTTATAGCTATTTTAGCTCCTGTTATAATTTTAATCATGTTAATGGCAGCATC
AACAGTTGTGGGAGATATTGTATCTGAGGAAATGGTATTTATAATGTATATGTTCTTTTTTCCATTGATTGTGGTTTTCA
TGGCTTTGTTCATTAAAAGAATGGAGCCAAAAATTTAA

Upstream 100 bases:

>100_bases
AATATCAGATCAATCAAGGATGTCAGCACTGTTTTGGAGATGTATTATTTGGATTCTCAAAAGGTGTTAAACAGAATTTT
ATTGGCTGGATAGTGGTAGT

Downstream 100 bases:

>100_bases
AGGGATGTTTATAGGCAAACATCCTTTTTTGTAAAGTAGATGTATGAAATTGTCAGTCCAATTGCAAATGTGGCCAGTAG
TATAGCTAGTGAAGTTGCTG

Product: type II secretion system protein, GspF

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MFGNFFIKVADVFLNIFDFFKNFNFKNLKLPKRNKTKKEINPKLFTKLNFSEVKKQKDIQNKLFNKLRKIFLKYFLGKKT
IATEILMFLVLFAIAGFEIAGIYLTSIVMIYIFMLYFPKISQKHQYDDLNFELPYALRHMATELKAGKGLHDTLLTVSIA
NYGSLSGEFKRVLKEIKYGKSSEDALMEMSLRVSSEGLSRAVHQIVGTLRVGGNLANSLNVIAEDISFDMQIKLKEYSQK
LNGFILIYTFIAILAPVIILIMLMAASTVVGDIVSEEMVFIMYMFFFPLIVVFMALFIKRMEPKI

Sequences:

>Translated_305_residues
MFGNFFIKVADVFLNIFDFFKNFNFKNLKLPKRNKTKKEINPKLFTKLNFSEVKKQKDIQNKLFNKLRKIFLKYFLGKKT
IATEILMFLVLFAIAGFEIAGIYLTSIVMIYIFMLYFPKISQKHQYDDLNFELPYALRHMATELKAGKGLHDTLLTVSIA
NYGSLSGEFKRVLKEIKYGKSSEDALMEMSLRVSSEGLSRAVHQIVGTLRVGGNLANSLNVIAEDISFDMQIKLKEYSQK
LNGFILIYTFIAILAPVIILIMLMAASTVVGDIVSEEMVFIMYMFFFPLIVVFMALFIKRMEPKI
>Mature_305_residues
MFGNFFIKVADVFLNIFDFFKNFNFKNLKLPKRNKTKKEINPKLFTKLNFSEVKKQKDIQNKLFNKLRKIFLKYFLGKKT
IATEILMFLVLFAIAGFEIAGIYLTSIVMIYIFMLYFPKISQKHQYDDLNFELPYALRHMATELKAGKGLHDTLLTVSIA
NYGSLSGEFKRVLKEIKYGKSSEDALMEMSLRVSSEGLSRAVHQIVGTLRVGGNLANSLNVIAEDISFDMQIKLKEYSQK
LNGFILIYTFIAILAPVIILIMLMAASTVVGDIVSEEMVFIMYMFFFPLIVVFMALFIKRMEPKI

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35135; Mature: 35135

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGNFFIKVADVFLNIFDFFKNFNFKNLKLPKRNKTKKEINPKLFTKLNFSEVKKQKDIQ
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHCCCHHHHHHHHHHH
NKLFNKLRKIFLKYFLGKKTIATEILMFLVLFAIAGFEIAGIYLTSIVMIYIFMLYFPKI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SQKHQYDDLNFELPYALRHMATELKAGKGLHDTLLTVSIANYGSLSGEFKRVLKEIKYGK
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
SSEDALMEMSLRVSSEGLSRAVHQIVGTLRVGGNLANSLNVIAEDISFDMQIKLKEYSQK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEHHHHHHHH
LNGFILIYTFIAILAPVIILIMLMAASTVVGDIVSEEMVFIMYMFFFPLIVVFMALFIKR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEPKI
HCCCC
>Mature Secondary Structure
MFGNFFIKVADVFLNIFDFFKNFNFKNLKLPKRNKTKKEINPKLFTKLNFSEVKKQKDIQ
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHCCCHHHHHHHHHHH
NKLFNKLRKIFLKYFLGKKTIATEILMFLVLFAIAGFEIAGIYLTSIVMIYIFMLYFPKI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SQKHQYDDLNFELPYALRHMATELKAGKGLHDTLLTVSIANYGSLSGEFKRVLKEIKYGK
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
SSEDALMEMSLRVSSEGLSRAVHQIVGTLRVGGNLANSLNVIAEDISFDMQIKLKEYSQK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEHHHHHHHH
LNGFILIYTFIAILAPVIILIMLMAASTVVGDIVSEEMVFIMYMFFFPLIVVFMALFIKR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEPKI
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA