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The map label for this gene is ydaO [C]

Identifier: 148642613

GI number: 148642613

Start: 531360

End: 532277

Strand: Reverse

Name: ydaO [C]

Synonym: Msm_0553

Alternate gene names: 148642613

Gene position: 532277-531360 (Counterclockwise)

Preceding gene: 148642614

Following gene: 148642612

Centisome position: 28.72

GC content: 34.53

Gene sequence:

>918_bases
ATGCAATGTAGTAAATGTGGTAATTCTCAAGTTATTATTAAAAAACAGCAATCCGGCCAATACTTATGTAAGGATTGTTT
TATTGAATCAATTGAAAAAAAAGTTATTAAAACAGTTAAAAAGGAAAAATTGTTGGATAAAGGAGATAAAGTTTTAGTTG
CACTTTCAGGAGGTAAAGACAGTGTAACAACTTTGGAAATCCTAAACAGTTTCCGTAAAATGAACATTATAGATATCTGT
GCAGTAACTGTTGACGAAGGAATTGATAACTACCGTCAGGAAGGTGTAGATATAGCTATTCGTCATGCAAAACGTTTGGG
TATTGAACATAAGGTAGTTTCTCTTAAAGAGGAATATGGAATAACTTTAGATGAAATAATGCAAAAGGATAATCATATCG
GGTCATGCAGTTACTGCGGTGTTTTCAGAAGAACCATAATAAATAAGGCAGCCCGTGAAATGGGTGCTACTAAAATAGCT
ACCGGCCATAATCTGGATGATGAAGTTCAGGCTATTATGATGAATTATCTTGAAGGAAACACTGATAATCTAACTAAATT
AGGGGCCAAATCATCTTCAAAAGCTAAAGAATTCACAGTTAAAATCAAACCTTTACGCGAAATTCCTGAAAGGGAAATAG
GTTTGTATGTAGTTGCAAAAGAACTGGAAGTTCACTTTGACAGCTGTCCTTATGCGCAGCAGTCCTTCAGAGGGGAAGTT
TCAGATTTGATAAACAAACTTTCAGAAAAACATCCTACAATAAAATATTCAGCACTTAGGGGATATGACAAAATTAAGGA
AGCTATTGGAGACGGATTTAAAAAAACTTATCCTCAATCAAGATGTGAAAGGTGCGGTGAACCGTCAGCCAACAGATTAT
GCAAAGCATGTACATTTTTAGAAGAATTAGGAAAGTGA

Upstream 100 bases:

>100_bases
ATAGTTGTGTTTCATTATATGAAGATGCAGGAGTTCATGTATTTGAAGTAAATACTCTAAATCAATTAGCTCAATTTGTA
GAGCAAATGTAGGTGTAGTT

Downstream 100 bases:

>100_bases
TGATATGACATTTACATTAATATTCAAAGATATCAGTGAAGAAAGAGACATACCAAAAGAAAGTTACACAATTAAAGATT
TATTAAATGATTTGGAATTG

Product: PP family ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MQCSKCGNSQVIIKKQQSGQYLCKDCFIESIEKKVIKTVKKEKLLDKGDKVLVALSGGKDSVTTLEILNSFRKMNIIDIC
AVTVDEGIDNYRQEGVDIAIRHAKRLGIEHKVVSLKEEYGITLDEIMQKDNHIGSCSYCGVFRRTIINKAAREMGATKIA
TGHNLDDEVQAIMMNYLEGNTDNLTKLGAKSSSKAKEFTVKIKPLREIPEREIGLYVVAKELEVHFDSCPYAQQSFRGEV
SDLINKLSEKHPTIKYSALRGYDKIKEAIGDGFKKTYPQSRCERCGEPSANRLCKACTFLEELGK

Sequences:

>Translated_305_residues
MQCSKCGNSQVIIKKQQSGQYLCKDCFIESIEKKVIKTVKKEKLLDKGDKVLVALSGGKDSVTTLEILNSFRKMNIIDIC
AVTVDEGIDNYRQEGVDIAIRHAKRLGIEHKVVSLKEEYGITLDEIMQKDNHIGSCSYCGVFRRTIINKAAREMGATKIA
TGHNLDDEVQAIMMNYLEGNTDNLTKLGAKSSSKAKEFTVKIKPLREIPEREIGLYVVAKELEVHFDSCPYAQQSFRGEV
SDLINKLSEKHPTIKYSALRGYDKIKEAIGDGFKKTYPQSRCERCGEPSANRLCKACTFLEELGK
>Mature_305_residues
MQCSKCGNSQVIIKKQQSGQYLCKDCFIESIEKKVIKTVKKEKLLDKGDKVLVALSGGKDSVTTLEILNSFRKMNIIDIC
AVTVDEGIDNYRQEGVDIAIRHAKRLGIEHKVVSLKEEYGITLDEIMQKDNHIGSCSYCGVFRRTIINKAAREMGATKIA
TGHNLDDEVQAIMMNYLEGNTDNLTKLGAKSSSKAKEFTVKIKPLREIPEREIGLYVVAKELEVHFDSCPYAQQSFRGEV
SDLINKLSEKHPTIKYSALRGYDKIKEAIGDGFKKTYPQSRCERCGEPSANRLCKACTFLEELGK

Specific function: Unknown

COG id: COG0037

COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TtcA family [H]

Homologues:

Organism=Homo sapiens, GI222537719, Length=309, Percent_Identity=31.0679611650485, Blast_Score=175, Evalue=4e-44,
Organism=Escherichia coli, GI1787606, Length=248, Percent_Identity=29.0322580645161, Blast_Score=94, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17540090, Length=305, Percent_Identity=31.1475409836066, Blast_Score=163, Evalue=8e-41,
Organism=Caenorhabditis elegans, GI193211090, Length=247, Percent_Identity=27.5303643724696, Blast_Score=78, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6321227, Length=163, Percent_Identity=31.9018404907975, Blast_Score=95, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24651972, Length=305, Percent_Identity=31.4754098360656, Blast_Score=174, Evalue=5e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012089
- InterPro:   IPR014729
- InterPro:   IPR011063
- InterPro:   IPR000541
- InterPro:   IPR020554 [H]

Pfam domain/function: PF01171 ATP_bind_3 [H]

EC number: NA

Molecular weight: Translated: 34214; Mature: 34214

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: PS01263 UPF0021

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQCSKCGNSQVIIKKQQSGQYLCKDCFIESIEKKVIKTVKKEKLLDKGDKVLVALSGGKD
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
SVTTLEILNSFRKMNIIDICAVTVDEGIDNYRQEGVDIAIRHAKRLGIEHKVVSLKEEYG
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHC
ITLDEIMQKDNHIGSCSYCGVFRRTIINKAAREMGATKIATGHNLDDEVQAIMMNYLEGN
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCCC
TDNLTKLGAKSSSKAKEFTVKIKPLREIPEREIGLYVVAKELEVHFDSCPYAQQSFRGEV
CCCHHHHCCCCCCCCCEEEEEEECHHHCCCHHHCCEEEEEHHHHHCCCCCCHHHHHCCHH
SDLINKLSEKHPTIKYSALRGYDKIKEAIGDGFKKTYPQSRCERCGEPSANRLCKACTFL
HHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCHHHCCCHHHHHHCCCCCHHHHHHHHHHH
EELGK
HHHCC
>Mature Secondary Structure
MQCSKCGNSQVIIKKQQSGQYLCKDCFIESIEKKVIKTVKKEKLLDKGDKVLVALSGGKD
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
SVTTLEILNSFRKMNIIDICAVTVDEGIDNYRQEGVDIAIRHAKRLGIEHKVVSLKEEYG
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHC
ITLDEIMQKDNHIGSCSYCGVFRRTIINKAAREMGATKIATGHNLDDEVQAIMMNYLEGN
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCCC
TDNLTKLGAKSSSKAKEFTVKIKPLREIPEREIGLYVVAKELEVHFDSCPYAQQSFRGEV
CCCHHHHCCCCCCCCCEEEEEEECHHHCCCHHHCCEEEEEHHHHHCCCCCCHHHHHCCHH
SDLINKLSEKHPTIKYSALRGYDKIKEAIGDGFKKTYPQSRCERCGEPSANRLCKACTFL
HHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCHHHCCCHHHHHHCCCCCHHHHHHHHHHH
EELGK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]