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The map label for this gene is uspF [C]

Identifier: 148642545

GI number: 148642545

Start: 458141

End: 458566

Strand: Reverse

Name: uspF [C]

Synonym: Msm_0485

Alternate gene names: 148642545

Gene position: 458566-458141 (Counterclockwise)

Preceding gene: 148642546

Following gene: 148642544

Centisome position: 24.75

GC content: 33.1

Gene sequence:

>426_bases
ATGTACAAAAAAATATTAGTCCCAACTGATGGGTCAGAATTTGCTCAAAAAGCTGAAAAACATGCATTATTTTTAGCTAA
AACTACTGGTGCTGATATTTATGCGCTTAGTGTTACTGAAAATAATTTTGTTAACGGGCTTCCATTGGATGATGAGGTAT
ATCAATTAAACCAATTACTCAAGCAACGTTCTGAAGATAATATAAAAGAATTTGAAGAAATGGATGAAACTTCAGGTATA
AAATTCCATGGAATTATTAGGGAAGGTTCACCAGCTAAAACTATCTTGGAAGTAGCTAAAGAAGAAGACATTGATTTGAT
TGTTATTGGTAGTTCTGGTAAATCCGGATTTGACAGATTTATAATGGGTAGTGTTGCTGAAAAAGTAGTTAACGCTGCTA
AATGTGCGGTGTTGGTTATTCACTAA

Upstream 100 bases:

>100_bases
TGGAACGAAAGATATATTATATATTATGAACAGAGATATTCATATTAAAAATGTTTGATATAAATAAAACATAAAGTCAA
ATTACTTGGGAGATGGAAAC

Downstream 100 bases:

>100_bases
TTTTTCAACATTCCCTTTTTTTATATTTTTAATAAACTATTTTAAGGTGTTTATCATGTTAGTAAAAAGAGCTATGTCTA
AAAATGTTGTTAGTGTTTCA

Product: universal stress protein, UspA

Products: NA

Alternate protein names: USP MJ0531 [H]

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MYKKILVPTDGSEFAQKAEKHALFLAKTTGADIYALSVTENNFVNGLPLDDEVYQLNQLLKQRSEDNIKEFEEMDETSGI
KFHGIIREGSPAKTILEVAKEEDIDLIVIGSSGKSGFDRFIMGSVAEKVVNAAKCAVLVIH

Sequences:

>Translated_141_residues
MYKKILVPTDGSEFAQKAEKHALFLAKTTGADIYALSVTENNFVNGLPLDDEVYQLNQLLKQRSEDNIKEFEEMDETSGI
KFHGIIREGSPAKTILEVAKEEDIDLIVIGSSGKSGFDRFIMGSVAEKVVNAAKCAVLVIH
>Mature_141_residues
MYKKILVPTDGSEFAQKAEKHALFLAKTTGADIYALSVTENNFVNGLPLDDEVYQLNQLLKQRSEDNIKEFEEMDETSGI
KFHGIIREGSPAKTILEVAKEEDIDLIVIGSSGKSGFDRFIMGSVAEKVVNAAKCAVLVIH

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 15533; Mature: 15533

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKKILVPTDGSEFAQKAEKHALFLAKTTGADIYALSVTENNFVNGLPLDDEVYQLNQLL
CCCEEEEECCCHHHHHHHHHHEEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHH
KQRSEDNIKEFEEMDETSGIKFHGIIREGSPAKTILEVAKEEDIDLIVIGSSGKSGFDRF
HHCCCCHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHH
IMGSVAEKVVNAAKCAVLVIH
HHHHHHHHHHHHHHEEEEEEC
>Mature Secondary Structure
MYKKILVPTDGSEFAQKAEKHALFLAKTTGADIYALSVTENNFVNGLPLDDEVYQLNQLL
CCCEEEEECCCHHHHHHHHHHEEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHH
KQRSEDNIKEFEEMDETSGIKFHGIIREGSPAKTILEVAKEEDIDLIVIGSSGKSGFDRF
HHCCCCHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHH
IMGSVAEKVVNAAKCAVLVIH
HHHHHHHHHHHHHHEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]