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The map label for this gene is 148642531

Identifier: 148642531

GI number: 148642531

Start: 447739

End: 448659

Strand: Reverse

Name: 148642531

Synonym: Msm_0471

Alternate gene names: NA

Gene position: 448659-447739 (Counterclockwise)

Preceding gene: 148642532

Following gene: 148642530

Centisome position: 24.21

GC content: 32.14

Gene sequence:

>921_bases
ATGGAATCTAAAATTATTTATTCATTATCTTTATTTTTAGAAAATAAACTTTCTGAAGAGCAATTATCCAAAGTCCAGGA
ATTTTTGCTAAGCGGAGACATTGGGATAGTTGCATCTAAATTTTTAGCTATTTTAATATTTTTTATTTTATTTGCAGATA
TTGTAATTGGAATATTTATTGTATTTTTTAAAATTTCTGATTTGTCTTTATTTTTACCTTTGTTAATAATTCCTTTTGTT
GCCACTTATGTTTTTATAAAACAGGAAAAAAGGGCAGCAGAAATTGAAAAATCAGCTCCTGACTTTTTAAGACAGCTTTC
AGCTATGTTAAAAGTTGGTTTAAGTTTTGAAAATGCAATGGAAGATATGTCCAAATATGGTGAAGGGCCTTTATATGATG
AAACAAGACGGGCAATTGCTGAGATTAAAGTTGGGCGAAACTTTGATGATGCATGGATGGCTATGGCTCAAAGATTAAAG
TCAAAAGAACTTGAGAGGATTTTTACAATAATATTGGGAAGCCGTAAAAGCGGATCAAGTATTGCCAATGTCATTTTTGA
TGTTTCAAATAATTTAAGGGATATGCTGGCTCTAAAACGCGAAAGAAAATCTTCTGTTATGATGGCAGTTATGTTTTTAA
TAATTTCTGCAGTAATAGCCAGTCCTTTTGCTTTAGGGATGGTTAGTGTTTACTCCCAGTTTATGCAAAGCTTTGGGAAG
CAGACACAGTTAATTTTGGCAGCGCCATTTGCAGGACAGATTTATCTGGTAATTCATTCGGTTTTGGTTGGTTTGATAGT
AAGCATAATAATGTATGGGAATGTTAAAAAGGGAATCAAGTTTTCTGTACCGTTGGCTCTGGTTTCTTATGGGATATTTT
ATCTGATTTCCAATTTTGCAGGTGCTATGTTTTTAAGTTAG

Upstream 100 bases:

>100_bases
AGAATAATTGGTGATTTACCTTTAATTATTGAATAAGTTTTCAAAAATTGATTTAATTTACAACTGAGATTTTATATATT
TTAAAGTTGTATTTTAATCT

Downstream 100 bases:

>100_bases
GTGATAATATGTTGGATAATAAAGGTCAGACTTCAGCAGAATTTATTTTATTGATTGGCGGGATTATAGTGGTTGTTTTA
TTGACTTTAATGTTTTACAG

Product: type II secretion system protein F, GspF

Products: NA

Alternate protein names: Bacterial Type II Secretion System Protein F Domain; Type II Secretion System; Type II Secretion System Protein F GspF; Type II Secretion System F Domain-Containing Protein; Type II Secretion System Protein

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MESKIIYSLSLFLENKLSEEQLSKVQEFLLSGDIGIVASKFLAILIFFILFADIVIGIFIVFFKISDLSLFLPLLIIPFV
ATYVFIKQEKRAAEIEKSAPDFLRQLSAMLKVGLSFENAMEDMSKYGEGPLYDETRRAIAEIKVGRNFDDAWMAMAQRLK
SKELERIFTIILGSRKSGSSIANVIFDVSNNLRDMLALKRERKSSVMMAVMFLIISAVIASPFALGMVSVYSQFMQSFGK
QTQLILAAPFAGQIYLVIHSVLVGLIVSIIMYGNVKKGIKFSVPLALVSYGIFYLISNFAGAMFLS

Sequences:

>Translated_306_residues
MESKIIYSLSLFLENKLSEEQLSKVQEFLLSGDIGIVASKFLAILIFFILFADIVIGIFIVFFKISDLSLFLPLLIIPFV
ATYVFIKQEKRAAEIEKSAPDFLRQLSAMLKVGLSFENAMEDMSKYGEGPLYDETRRAIAEIKVGRNFDDAWMAMAQRLK
SKELERIFTIILGSRKSGSSIANVIFDVSNNLRDMLALKRERKSSVMMAVMFLIISAVIASPFALGMVSVYSQFMQSFGK
QTQLILAAPFAGQIYLVIHSVLVGLIVSIIMYGNVKKGIKFSVPLALVSYGIFYLISNFAGAMFLS
>Mature_306_residues
MESKIIYSLSLFLENKLSEEQLSKVQEFLLSGDIGIVASKFLAILIFFILFADIVIGIFIVFFKISDLSLFLPLLIIPFV
ATYVFIKQEKRAAEIEKSAPDFLRQLSAMLKVGLSFENAMEDMSKYGEGPLYDETRRAIAEIKVGRNFDDAWMAMAQRLK
SKELERIFTIILGSRKSGSSIANVIFDVSNNLRDMLALKRERKSSVMMAVMFLIISAVIASPFALGMVSVYSQFMQSFGK
QTQLILAAPFAGQIYLVIHSVLVGLIVSIIMYGNVKKGIKFSVPLALVSYGIFYLISNFAGAMFLS

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34183; Mature: 34183

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESKIIYSLSLFLENKLSEEQLSKVQEFLLSGDIGIVASKFLAILIFFILFADIVIGIFI
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFFKISDLSLFLPLLIIPFVATYVFIKQEKRAAEIEKSAPDFLRQLSAMLKVGLSFENAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHH
EDMSKYGEGPLYDETRRAIAEIKVGRNFDDAWMAMAQRLKSKELERIFTIILGSRKSGSS
HHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
IANVIFDVSNNLRDMLALKRERKSSVMMAVMFLIISAVIASPFALGMVSVYSQFMQSFGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QTQLILAAPFAGQIYLVIHSVLVGLIVSIIMYGNVKKGIKFSVPLALVSYGIFYLISNFA
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
GAMFLS
HHHHCC
>Mature Secondary Structure
MESKIIYSLSLFLENKLSEEQLSKVQEFLLSGDIGIVASKFLAILIFFILFADIVIGIFI
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFFKISDLSLFLPLLIIPFVATYVFIKQEKRAAEIEKSAPDFLRQLSAMLKVGLSFENAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHH
EDMSKYGEGPLYDETRRAIAEIKVGRNFDDAWMAMAQRLKSKELERIFTIILGSRKSGSS
HHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
IANVIFDVSNNLRDMLALKRERKSSVMMAVMFLIISAVIASPFALGMVSVYSQFMQSFGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QTQLILAAPFAGQIYLVIHSVLVGLIVSIIMYGNVKKGIKFSVPLALVSYGIFYLISNFA
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
GAMFLS
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA