Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

Click here to switch to the map view.

The map label for this gene is 148642449

Identifier: 148642449

GI number: 148642449

Start: 370998

End: 371321

Strand: Reverse

Name: 148642449

Synonym: Msm_0389

Alternate gene names: NA

Gene position: 371321-370998 (Counterclockwise)

Preceding gene: 148642450

Following gene: 148642446

Centisome position: 20.04

GC content: 33.64

Gene sequence:

>324_bases
ATGCCGGAATTCAAATTATCTAAAGAAGCAGGAACCAAAAAGTTCGAACTTTCAATAGCTATTGATTATGATGAAGATGG
CAATATTGAAGCTCAGGAGTTTTATGATGGTGTGGACTGGTCTGATAATCCTGCTGACATTAGGTTAAATACTAGCTATT
GTGATGAGGATGAACAAGACGAGTGGAATTTGTTTTTCAACGATTTCATGCATTTACTGGAATCAAACGAGTTGACTGAG
AAAGCTGAAACTTTAAAAGAAGTGGATGATTCTTATTATTTTGTAGAAGAATGTATTGAAATTGTTTTGACTGAAGAAGA
TTAA

Upstream 100 bases:

>100_bases
AACCTGTCAAAAGTTTATTTGTCCGTTTAGGTTATTCTAAAGCAGACATTGCATCATTGTTAAAAGAATTTTAAATATAT
TATTAATGGAGGTTTTCAAA

Downstream 100 bases:

>100_bases
GAAAAGAGAAAGTCTTTTCTATAAATCTTCTATATCTTTTTTTTCTAGGATGTGTGCATCACTATCTTTTAAAAGAGCAA
TTGCTTCATCCATATGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MPEFKLSKEAGTKKFELSIAIDYDEDGNIEAQEFYDGVDWSDNPADIRLNTSYCDEDEQDEWNLFFNDFMHLLESNELTE
KAETLKEVDDSYYFVEECIEIVLTEED

Sequences:

>Translated_107_residues
MPEFKLSKEAGTKKFELSIAIDYDEDGNIEAQEFYDGVDWSDNPADIRLNTSYCDEDEQDEWNLFFNDFMHLLESNELTE
KAETLKEVDDSYYFVEECIEIVLTEED
>Mature_106_residues
PEFKLSKEAGTKKFELSIAIDYDEDGNIEAQEFYDGVDWSDNPADIRLNTSYCDEDEQDEWNLFFNDFMHLLESNELTEK
AETLKEVDDSYYFVEECIEIVLTEED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12616; Mature: 12484

Theoretical pI: Translated: 3.55; Mature: 3.55

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEFKLSKEAGTKKFELSIAIDYDEDGNIEAQEFYDGVDWSDNPADIRLNTSYCDEDEQD
CCCCCCCCCCCCEEEEEEEEEECCCCCCEEHHHHCCCCCCCCCCCCEEEECCCCCCCCCC
EWNLFFNDFMHLLESNELTEKAETLKEVDDSYYFVEECIEIVLTEED
CHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PEFKLSKEAGTKKFELSIAIDYDEDGNIEAQEFYDGVDWSDNPADIRLNTSYCDEDEQD
CCCCCCCCCCCEEEEEEEEEECCCCCCEEHHHHCCCCCCCCCCCCEEEECCCCCCCCCC
EWNLFFNDFMHLLESNELTEKAETLKEVDDSYYFVEECIEIVLTEED
CHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA