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The map label for this gene is 148642423

Identifier: 148642423

GI number: 148642423

Start: 346187

End: 346954

Strand: Reverse

Name: 148642423

Synonym: Msm_0363

Alternate gene names: NA

Gene position: 346954-346187 (Counterclockwise)

Preceding gene: 148642424

Following gene: 148642422

Centisome position: 18.72

GC content: 28.52

Gene sequence:

>768_bases
ATGAAATTTAAAACAACTCCTTATCATTTTGACTTATTAAAAGATGAGGAAAGACTTTCAGCATTTTACGAAGCTATTAA
GGAGTTATCCACCAGTCAGGAATTGGCTTATGATTTGGGATGCGGAAGTGGAATTTTATCTTTTTTTCTAAATTCTTATT
TTAAAGAAATAATAGCTATTGAACAGGATTTTAAAGCAAGTAGATGTGCTAAAGAAAATTTGAAAAGCTTTAAAAACATT
GAAGTTGTTAACGAAGATGTTTTAAAATATGATTTTTCTAAAAAATGTGATTTGATTGTTTGTGAAATGCTGGATACTGC
CCTTATTGATGAAGAAGAAGTTCCAGTATTGAATCATGCAAGAAATTATCTGAAAGAGAATGGTAAAATAATTCCTCAGG
GTATTATTAATACTATAGAGCTTGCACACCTGGAGAGGGATTACATTCATTATGATGAAGATGTTAACTGCAAAACTTTA
TCAAAACCGGTTATTTATGATGAAATTAATTTTCTAAATGATATAAATCCTGATTTTGAAAAGGTAATAACCATTAAGGC
CAATAAGGATTCTTTAGTTAATGGATTGAAAATTACAACTATCACCAAACTTAATGATAATCTGGTTTGCGGACCTACAC
CTATGTTAAACCCGCCTCTGTTAATTCCTTTAGATGAAAAAAATGTAAAATGCAATGATTTAATTAATGTTAAATTAAAA
TATATTATGGGAAAAGGAATTGGAACTATTGAAGCAAATTATTATTAG

Upstream 100 bases:

>100_bases
AGGGGTAGAACACGTAAAACTCACAACTACTGCTAATGGTGAAGAATTCAGTGACAGAGATCATGAACATGATCATCACC
ATTAATTCTTATTTTTTTTT

Downstream 100 bases:

>100_bases
GTGATTTTATTTCATTTAAAAGACAGCTGGAAGAATTTTTAGAAAATAATGAAAAATTGATTATATTAGGGATTGGAAAC
GAGCTTAAATGTGATGATGG

Product: RNA methylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MKFKTTPYHFDLLKDEERLSAFYEAIKELSTSQELAYDLGCGSGILSFFLNSYFKEIIAIEQDFKASRCAKENLKSFKNI
EVVNEDVLKYDFSKKCDLIVCEMLDTALIDEEEVPVLNHARNYLKENGKIIPQGIINTIELAHLERDYIHYDEDVNCKTL
SKPVIYDEINFLNDINPDFEKVITIKANKDSLVNGLKITTITKLNDNLVCGPTPMLNPPLLIPLDEKNVKCNDLINVKLK
YIMGKGIGTIEANYY

Sequences:

>Translated_255_residues
MKFKTTPYHFDLLKDEERLSAFYEAIKELSTSQELAYDLGCGSGILSFFLNSYFKEIIAIEQDFKASRCAKENLKSFKNI
EVVNEDVLKYDFSKKCDLIVCEMLDTALIDEEEVPVLNHARNYLKENGKIIPQGIINTIELAHLERDYIHYDEDVNCKTL
SKPVIYDEINFLNDINPDFEKVITIKANKDSLVNGLKITTITKLNDNLVCGPTPMLNPPLLIPLDEKNVKCNDLINVKLK
YIMGKGIGTIEANYY
>Mature_255_residues
MKFKTTPYHFDLLKDEERLSAFYEAIKELSTSQELAYDLGCGSGILSFFLNSYFKEIIAIEQDFKASRCAKENLKSFKNI
EVVNEDVLKYDFSKKCDLIVCEMLDTALIDEEEVPVLNHARNYLKENGKIIPQGIINTIELAHLERDYIHYDEDVNCKTL
SKPVIYDEINFLNDINPDFEKVITIKANKDSLVNGLKITTITKLNDNLVCGPTPMLNPPLLIPLDEKNVKCNDLINVKLK
YIMGKGIGTIEANYY

Specific function: Unknown

COG id: COG4076

COG function: function code R; Predicted RNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1452 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001737
- InterPro:   IPR021172 [H]

Pfam domain/function: PF00398 RrnaAD [H]

EC number: NA

Molecular weight: Translated: 29163; Mature: 29163

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS01131 RRNA_A_DIMETH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKTTPYHFDLLKDEERLSAFYEAIKELSTSQELAYDLGCGSGILSFFLNSYFKEIIAI
CCCCCCCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
EQDFKASRCAKENLKSFKNIEVVNEDVLKYDFSKKCDLIVCEMLDTALIDEEEVPVLNHA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCCCCCHHHHH
RNYLKENGKIIPQGIINTIELAHLERDYIHYDEDVNCKTLSKPVIYDEINFLNDINPDFE
HHHHHHCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEHHHHHHHHCCCCCCE
KVITIKANKDSLVNGLKITTITKLNDNLVCGPTPMLNPPLLIPLDEKNVKCNDLINVKLK
EEEEEEECCHHHHCCEEEEEEEECCCCEEECCCCCCCCCEEEEECCCCCCCCHHHHEEEE
YIMGKGIGTIEANYY
EEECCCCCEEECCCC
>Mature Secondary Structure
MKFKTTPYHFDLLKDEERLSAFYEAIKELSTSQELAYDLGCGSGILSFFLNSYFKEIIAI
CCCCCCCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
EQDFKASRCAKENLKSFKNIEVVNEDVLKYDFSKKCDLIVCEMLDTALIDEEEVPVLNHA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCCCCCHHHHH
RNYLKENGKIIPQGIINTIELAHLERDYIHYDEDVNCKTLSKPVIYDEINFLNDINPDFE
HHHHHHCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEHHHHHHHHCCCCCCE
KVITIKANKDSLVNGLKITTITKLNDNLVCGPTPMLNPPLLIPLDEKNVKCNDLINVKLK
EEEEEEECCHHHHCCEEEEEEEECCCCEEECCCCCCCCCEEEEECCCCCCCCHHHHEEEE
YIMGKGIGTIEANYY
EEECCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]