| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642374
Identifier: 148642374
GI number: 148642374
Start: 303236
End: 303628
Strand: Reverse
Name: 148642374
Synonym: Msm_0314
Alternate gene names: NA
Gene position: 303628-303236 (Counterclockwise)
Preceding gene: 148642375
Following gene: 148642373
Centisome position: 16.38
GC content: 29.52
Gene sequence:
>393_bases ATGGATAATGAAGCTAAACTTAATTTAATGAAAAAAAGAGTGATTGGAAGTTTTAAATGGCAGGAAGATATAATAATTCC TTTTTCAAAAGAATTTGGATGCACAACTGAAGATTTGGAAGATTTGTTTATGGATTTATTGGATATGTCTTCTTTAGAAG CATTACATGGAACATTGGAAATTGCCAATCACAAATGTTTACTTGAAAGATTGGATGCTGATTTAAGGTTGCCCTGGTAT GTGGATGTATTGGAGTTATTGTCTGTAGAACAGGGTGATGAACTTAAAAATAAAGTGGCTAATGAGATTATTGATGGGAA ATCTTATGATATTGCTTTAGATGAGGGTAGAAAGGATTTATTTAATTTATTAAAGAATATAAATAATGAATAG
Upstream 100 bases:
>100_bases ATAGGTGAAAGACCGGGATATGGTAGGATAGAGACTTTAATAGGAATAATTGCTGCTGTTATTGTTTATTTGATAATGCA TTTAATCTAGTTGTGATTGT
Downstream 100 bases:
>100_bases TATAAATATAATAATTAATAATTTTGAGAGGCTTATAGATGTTAAATGCTATTAAGGATGTTGTGAGGAAAAGCTCAATT CATGTTTGTATTGTGAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MDNEAKLNLMKKRVIGSFKWQEDIIIPFSKEFGCTTEDLEDLFMDLLDMSSLEALHGTLEIANHKCLLERLDADLRLPWY VDVLELLSVEQGDELKNKVANEIIDGKSYDIALDEGRKDLFNLLKNINNE
Sequences:
>Translated_130_residues MDNEAKLNLMKKRVIGSFKWQEDIIIPFSKEFGCTTEDLEDLFMDLLDMSSLEALHGTLEIANHKCLLERLDADLRLPWY VDVLELLSVEQGDELKNKVANEIIDGKSYDIALDEGRKDLFNLLKNINNE >Mature_130_residues MDNEAKLNLMKKRVIGSFKWQEDIIIPFSKEFGCTTEDLEDLFMDLLDMSSLEALHGTLEIANHKCLLERLDADLRLPWY VDVLELLSVEQGDELKNKVANEIIDGKSYDIALDEGRKDLFNLLKNINNE
Specific function: Unknown
COG id: COG4084
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14987; Mature: 14987
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNEAKLNLMKKRVIGSFKWQEDIIIPFSKEFGCTTEDLEDLFMDLLDMSSLEALHGTLE CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IANHKCLLERLDADLRLPWYVDVLELLSVEQGDELKNKVANEIIDGKSYDIALDEGRKDL HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHH FNLLKNINNE HHHHHHCCCC >Mature Secondary Structure MDNEAKLNLMKKRVIGSFKWQEDIIIPFSKEFGCTTEDLEDLFMDLLDMSSLEALHGTLE CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IANHKCLLERLDADLRLPWYVDVLELLSVEQGDELKNKVANEIIDGKSYDIALDEGRKDL HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHH FNLLKNINNE HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA