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The map label for this gene is ydjH [C]

Identifier: 148642367

GI number: 148642367

Start: 296282

End: 297241

Strand: Reverse

Name: ydjH [C]

Synonym: Msm_0307

Alternate gene names: 148642367

Gene position: 297241-296282 (Counterclockwise)

Preceding gene: 148642368

Following gene: 148642366

Centisome position: 16.04

GC content: 32.08

Gene sequence:

>960_bases
ATGGAATTTTTAGACAGTGACATTAATGTTGATGTAATAGGTTTTGGAGCTTTGAATGTTGACAAATTGCATACAGTAGA
AAATATTGCATGTAATGATGAGGAAAGTTTCATTAAATCTCAAAAAGATACTCCTGGAGGATCTGCAGCAAATACTGTAA
TCGGGCTGGCCAGATTAGGATGTCCAACATCCATAATTGGTAAAATAGCTGAAGATGATGACGGAGATTTGATTGAACTG
AATTTGGCCATGAATGAAGTTTATACTAATAATTTGATTTATGCAGATAAAGGCAACACAGGTAAAGTATTAGGTTTTGT
TGATGAAAAAGGCGAACGCTGTCTTTATGTTGATCCTGGAGTTAATGATGAAATAGTACTGGATGAAATTAATTTATTGA
ATCTTTCAAAATGTAAAATAATGCATTACACTTCCTTTGTTGGCGATTCATTCAAGACTCAAATCGAACTGCTGGACAAA
CTTAATGATAATACTTTACTGAGCTTTGATCCTGGAATGTTATATGTTCAAAAAGGATTAAAAGAGTTAGAGCCGATTTT
GGATAAAACAGATATTTTGTTAATTAATGAAAATGAATTAAGATTATTGTATGAAGATTATTACAAAGCTATTGACTGTG
CTGATGAATTGTCTGTAAAAGAAATAGCTGTTCATATTTTAGATGAAGGTATTCGGACTGTTGTTGTTAAAAAAGGTTCC
GAAGGTGTTTTTGCAATTACTGATAGTGAGGAATGTGATGTTGGCACCTACGAATGCAGTGTTGTTGATACAACAGGTGC
CGGAGATAGCTTTAACAGTGGATTTTTATACGGTAAATTAAATGGTTATTCTCTTGAAGAATCTTGTAAAATTGGAAATT
GGGTAGCTAGTAAGGCAATTGAAGGTTTTGGAATGGAAAAATTCCCTAATTTAAAAGATTTAAAGGAATTTATAAATTAA

Upstream 100 bases:

>100_bases
GGAAGTTGATGGTGTAATTAGCATATCTGCAGGTAATTATGACGGAAAACTTGGAGACAAAAATATTAATTTATTAGATA
TTCTAAAATAAGGTTTTAAA

Downstream 100 bases:

>100_bases
ATAATCTTTATTAATTATTAAAAACAAAAATTAAATTTAAATAAAAAATTATTCAGTTGGTAATAGTATGAATATATCTT
TTGATAAGCAGATAAGTAGT

Product: ribokinase family sugar kinase

Products: ADP; D-ribose 5-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MEFLDSDINVDVIGFGALNVDKLHTVENIACNDEESFIKSQKDTPGGSAANTVIGLARLGCPTSIIGKIAEDDDGDLIEL
NLAMNEVYTNNLIYADKGNTGKVLGFVDEKGERCLYVDPGVNDEIVLDEINLLNLSKCKIMHYTSFVGDSFKTQIELLDK
LNDNTLLSFDPGMLYVQKGLKELEPILDKTDILLINENELRLLYEDYYKAIDCADELSVKEIAVHILDEGIRTVVVKKGS
EGVFAITDSEECDVGTYECSVVDTTGAGDSFNSGFLYGKLNGYSLEESCKIGNWVASKAIEGFGMEKFPNLKDLKEFIN

Sequences:

>Translated_319_residues
MEFLDSDINVDVIGFGALNVDKLHTVENIACNDEESFIKSQKDTPGGSAANTVIGLARLGCPTSIIGKIAEDDDGDLIEL
NLAMNEVYTNNLIYADKGNTGKVLGFVDEKGERCLYVDPGVNDEIVLDEINLLNLSKCKIMHYTSFVGDSFKTQIELLDK
LNDNTLLSFDPGMLYVQKGLKELEPILDKTDILLINENELRLLYEDYYKAIDCADELSVKEIAVHILDEGIRTVVVKKGS
EGVFAITDSEECDVGTYECSVVDTTGAGDSFNSGFLYGKLNGYSLEESCKIGNWVASKAIEGFGMEKFPNLKDLKEFIN
>Mature_319_residues
MEFLDSDINVDVIGFGALNVDKLHTVENIACNDEESFIKSQKDTPGGSAANTVIGLARLGCPTSIIGKIAEDDDGDLIEL
NLAMNEVYTNNLIYADKGNTGKVLGFVDEKGERCLYVDPGVNDEIVLDEINLLNLSKCKIMHYTSFVGDSFKTQIELLDK
LNDNTLLSFDPGMLYVQKGLKELEPILDKTDILLINENELRLLYEDYYKAIDCADELSVKEIAVHILDEGIRTVVVKKGS
EGVFAITDSEECDVGTYECSVVDTTGAGDSFNSGFLYGKLNGYSLEESCKIGNWVASKAIEGFGMEKFPNLKDLKEFIN

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Homo sapiens, GI11545855, Length=280, Percent_Identity=26.4285714285714, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI87081971, Length=303, Percent_Identity=25.4125412541254, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: 2.7.1.15

Molecular weight: Translated: 35111; Mature: 35111

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFLDSDINVDVIGFGALNVDKLHTVENIACNDEESFIKSQKDTPGGSAANTVIGLARLG
CCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCC
CPTSIIGKIAEDDDGDLIELNLAMNEVYTNNLIYADKGNTGKVLGFVDEKGERCLYVDPG
CCHHHHHHHCCCCCCCEEEEEEEEHHEECCCEEEECCCCCCEEEEEEECCCCEEEEECCC
VNDEIVLDEINLLNLSKCKIMHYTSFVGDSFKTQIELLDKLNDNTLLSFDPGMLYVQKGL
CCCCEEEECCCEEECCCEEEEEEHHHHCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHH
KELEPILDKTDILLINENELRLLYEDYYKAIDCADELSVKEIAVHILDEGIRTVVVKKGS
HHHHHHHCCCCEEEECCCCEEEHHHHHHHHHCCHHHCCHHHHHHHHHHCCCEEEEEEECC
EGVFAITDSEECDVGTYECSVVDTTGAGDSFNSGFLYGKLNGYSLEESCKIGNWVASKAI
CCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHCCCCHHHHHHHH
EGFGMEKFPNLKDLKEFIN
HCCCCCCCCCHHHHHHHHC
>Mature Secondary Structure
MEFLDSDINVDVIGFGALNVDKLHTVENIACNDEESFIKSQKDTPGGSAANTVIGLARLG
CCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCC
CPTSIIGKIAEDDDGDLIELNLAMNEVYTNNLIYADKGNTGKVLGFVDEKGERCLYVDPG
CCHHHHHHHCCCCCCCEEEEEEEEHHEECCCEEEECCCCCCEEEEEEECCCCEEEEECCC
VNDEIVLDEINLLNLSKCKIMHYTSFVGDSFKTQIELLDKLNDNTLLSFDPGMLYVQKGL
CCCCEEEECCCEEECCCEEEEEEHHHHCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHH
KELEPILDKTDILLINENELRLLYEDYYKAIDCADELSVKEIAVHILDEGIRTVVVKKGS
HHHHHHHCCCCEEEECCCCEEEHHHHHHHHHCCHHHCCHHHHHHHHHHCCCEEEEEEECC
EGVFAITDSEECDVGTYECSVVDTTGAGDSFNSGFLYGKLNGYSLEESCKIGNWVASKAI
CCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHCCCCHHHHHHHH
EGFGMEKFPNLKDLKEFIN
HCCCCCCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; D-ribose

Specific reaction: ATP + D-ribose = ADP + D-ribose 5-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]