| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is tauC [C]
Identifier: 148642351
GI number: 148642351
Start: 282107
End: 282847
Strand: Reverse
Name: tauC [C]
Synonym: Msm_0291
Alternate gene names: 148642351
Gene position: 282847-282107 (Counterclockwise)
Preceding gene: 148642353
Following gene: 148642350
Centisome position: 15.26
GC content: 32.66
Gene sequence:
>741_bases ATGAATAAAGATAAGTTCACACCGATAATTTTACCAATTTTAATTATAATTATCTGGTATATCATAACTTCTGTTTTAGA GTTAGTTAATCCTTATTTCTTACCAAGTCCAGGTAGTGTCTGCAATTCTGCATGGAATATAATACAATCTGGAAAACTTT TTGTTGATACTATGGATACTTTATTTAAAGTATTTGGTGGTATGATTCTTGCATCTATTGTAGCTATTCCTTTAGGAATA TTGCTTGGATGGTATAGCAAGTTGGAAACTTTATGTAGTTTTGTAATCAGTATATTAAGGCCAATACCTCCGATAGCTTG GATTCCATTTTCAATATTGTGGTTTGGAATCGGAACAGCTCCTGCTATATTTATTATTTTCATAGGCTGTGTTTTCCCGA TTCTTATTTACACAATTGATGGAGTTAAAAGAACCGATAAAGTTTTAATTGAATCTGCACAAACACTGGGAGCAGATGAT AAAACAGTACTTACACAGGTTATTTTACCTTCTGCAGTACCGCCTATAGTTTCCGGACTTAAAGTTGGTGTGGGAATAGC TTTAATGTGTACTATTTCTGCAGAGATGATAGGTTCAAGTAGCGGTTTAGGATATTTAATTTTAACAGCTACAAATTTAT TTGATACAGGTACTACTGTTGTAGGTATGTTGGTTATTGGTTTGATTGGTTTAATCCTTGATTATGTCTTCGGACTTATA GAAAAAAGAGTATTCTGGTAG
Upstream 100 bases:
>100_bases ATTTTGATTTGTGATTATCTACTTAAAATCATGTGAAATATTTATATAAAAATACAATCAATATTAATAATTGTAAAAAA AATTTTATGTAAGTGATTTA
Downstream 100 bases:
>100_bases GTAGTTTAAAATGGCAATTGAAATTAAAAATATAAATAAATCTTTTCATGGCCGCGGTTTGGATCATGATATAAAAGTTT TAGATGATGTTAATTTAAAT
Product: nitrate/sulfonate/bicarbonate ABC transporter, permease component, TauC
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MNKDKFTPIILPILIIIIWYIITSVLELVNPYFLPSPGSVCNSAWNIIQSGKLFVDTMDTLFKVFGGMILASIVAIPLGI LLGWYSKLETLCSFVISILRPIPPIAWIPFSILWFGIGTAPAIFIIFIGCVFPILIYTIDGVKRTDKVLIESAQTLGADD KTVLTQVILPSAVPPIVSGLKVGVGIALMCTISAEMIGSSSGLGYLILTATNLFDTGTTVVGMLVIGLIGLILDYVFGLI EKRVFW
Sequences:
>Translated_246_residues MNKDKFTPIILPILIIIIWYIITSVLELVNPYFLPSPGSVCNSAWNIIQSGKLFVDTMDTLFKVFGGMILASIVAIPLGI LLGWYSKLETLCSFVISILRPIPPIAWIPFSILWFGIGTAPAIFIIFIGCVFPILIYTIDGVKRTDKVLIESAQTLGADD KTVLTQVILPSAVPPIVSGLKVGVGIALMCTISAEMIGSSSGLGYLILTATNLFDTGTTVVGMLVIGLIGLILDYVFGLI EKRVFW >Mature_246_residues MNKDKFTPIILPILIIIIWYIITSVLELVNPYFLPSPGSVCNSAWNIIQSGKLFVDTMDTLFKVFGGMILASIVAIPLGI LLGWYSKLETLCSFVISILRPIPPIAWIPFSILWFGIGTAPAIFIIFIGCVFPILIYTIDGVKRTDKVLIESAQTLGADD KTVLTQVILPSAVPPIVSGLKVGVGIALMCTISAEMIGSSSGLGYLILTATNLFDTGTTVVGMLVIGLIGLILDYVFGLI EKRVFW
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=239, Percent_Identity=30.5439330543933, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI87081802, Length=238, Percent_Identity=32.3529411764706, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1789033, Length=164, Percent_Identity=28.6585365853659, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1788449, Length=154, Percent_Identity=27.2727272727273, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 26642; Mature: 26642
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKDKFTPIILPILIIIIWYIITSVLELVNPYFLPSPGSVCNSAWNIIQSGKLFVDTMDT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH LFKVFGGMILASIVAIPLGILLGWYSKLETLCSFVISILRPIPPIAWIPFSILWFGIGTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH PAIFIIFIGCVFPILIYTIDGVKRTDKVLIESAQTLGADDKTVLTQVILPSAVPPIVSGL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHH KVGVGIALMCTISAEMIGSSSGLGYLILTATNLFDTGTTVVGMLVIGLIGLILDYVFGLI HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKRVFW HHHHCC >Mature Secondary Structure MNKDKFTPIILPILIIIIWYIITSVLELVNPYFLPSPGSVCNSAWNIIQSGKLFVDTMDT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH LFKVFGGMILASIVAIPLGILLGWYSKLETLCSFVISILRPIPPIAWIPFSILWFGIGTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH PAIFIIFIGCVFPILIYTIDGVKRTDKVLIESAQTLGADDKTVLTQVILPSAVPPIVSGL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHH KVGVGIALMCTISAEMIGSSSGLGYLILTATNLFDTGTTVVGMLVIGLIGLILDYVFGLI HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKRVFW HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]