Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is 148642341

Identifier: 148642341

GI number: 148642341

Start: 270718

End: 272496

Strand: Reverse

Name: 148642341

Synonym: Msm_0281

Alternate gene names: NA

Gene position: 272496-270718 (Counterclockwise)

Preceding gene: 148642343

Following gene: 148642340

Centisome position: 14.7

GC content: 32.43

Gene sequence:

>1779_bases
ATGATTGAAAAGAAATATAAAAAACTGTTAAATCTTTTTATCATATGTCTTTTAGGTTTAATCCTGATTTCATCTGTCTA
CGGAGCTGATGAATTACAATACAGTAATGATGACATTGTTATGGGAACTACTATCTATGATGTTTCTTCCGACTTGTCCA
ATGATGACATTCAATCAATGTTGGATAATGCTGGACAGGGAGATACATTTAATTTTGTTAGCAAGGAATATAAGGGGATT
TCATTAGTTGTTGACAAAAAAGTAAATATTATCTCTAATGTTAACAGCACGGTTTATACATCTGGAGAGCTGTCCAATAA
AGCTCAGGAGTTAAATATTGATAAAACTTTTGGATTTTATTTCACAAAAAATAGTGCAGGCAGTGTCTTATCCGGATTTA
ATATTGTAGCTGCATCATCAGATTATGGAGTTATTGTTGATAATTCGGACAATACCATTATTAGGGAAAATTCTATTGTT
GATGCCGGAAATAATGTTTTGGTTAAAAACTCAAAGAATGTAACTTTATTTGGAAATGTTTTAAATAATGCCAAGGAAAA
CGGGCTTCAGCTTAAAAATGTTTCCAGTTGTTATGTAGCCAATAACACAATGATGTTCAATGGCAGATCAGGAATTGAGA
TTTATGATATTGATAATTCCAATATAACTTCAAATTATTGCTGCAATAATAGTTTTAACGGAATTTCATTATACGGCAAA
TCTTTTAACAATTCCTATACTCATAATTTCCTTAATTACAATACAAATGGTATTTATATAAATTGTCAGTCCTGGGGAGA
TGAAATTAAAGCAAATACCATGATTCACAATATTCAAAACCCTGACTGTGAATTGGGTGGTTTTGAATCTGGTAATGGTC
TTTTATTCGGGGATGCATATAGTGCTGTAGCTAATAATGGAGTTTATGTGTCATATAATTCATTTGCACATAATGAAAAC
TTCCAGGCTAAAAATAATCCTTTACAGAATATGATTACATTAGGTCCGAATTTTTTTAATTCTGATGACCCTGAAAACAC
ATTTGTCTGCCCGCTGTTGCTTGCCAAAATCTTAAGGTTAAATGCAATATCATTACCTAACGGTATAGGAATTCAAATGG
TTGAAGATGATACTCCAGTAAAAGAAGCTGGAACTATTGCAGTTCAGGTTGAAGTTGACGGTAATATGTATACTGCAACT
TTGGAAAATGGTAAGGCAGTAATTAAAGTAGATCCTAATGTTGACCACCAAGTTGAAATTCAGGTTGGCGGAGAACATAA
TCAGGAAATTAAAAAAATAAAGCAGAATGTAATTTCTTATAATAAAAAAGACGATTCAGGTAATGGTGATTCTGGTAAAG
ATGACAACATGGGATCTGACGGCAAACCGTCTGGTTCTGATGGTGATAACTCAGGTAATAAAACTGGTGACAGTTCTGGT
TCAGGAGATGCTTCTGGTGAGAGTGGTATTGCAAATATCAAAAACTCTGATGAATTTTCACAAAATCTTGGAACAAATAG
TTCTGATTACTATCAGAAATATGAATCTTTAAGCGGTAAAGATGCTATGGCTAAAGGAGATCAAAGTGCAGCAAAATCTT
CAGACAGCAGTGGTTCTCCAAGTGATGACGGTTCATCAAAAGAAGGAAAATCCTATGAGCTAGTGTCTCCAAATAAAATA
TCTAAAGTAATTCAAAATACATCAGGAGTTATTATTCTTGCAATAATCGCTTTATTGGTTTTATTAATAATAGGATATAA
ACGTAAAAATAAAATGTGA

Upstream 100 bases:

>100_bases
AGTGCTAAATTATTTGAAAATATTTATATGCTTTGATTTCCATATACAAATTTAATCAATATAATTATTGATTTATAATG
TATGTTGATGGTAGATTGAC

Downstream 100 bases:

>100_bases
TAAACATTTTTTCATTTTTCTTTTTTTTAATTTTTAAATACTGGTTTTATATAATATTTTCATAATTGGAAATATTAGGT
TTAATTTGGATACAAATAAA

Product: putative adhesin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 592; Mature: 592

Protein sequence:

>592_residues
MIEKKYKKLLNLFIICLLGLILISSVYGADELQYSNDDIVMGTTIYDVSSDLSNDDIQSMLDNAGQGDTFNFVSKEYKGI
SLVVDKKVNIISNVNSTVYTSGELSNKAQELNIDKTFGFYFTKNSAGSVLSGFNIVAASSDYGVIVDNSDNTIIRENSIV
DAGNNVLVKNSKNVTLFGNVLNNAKENGLQLKNVSSCYVANNTMMFNGRSGIEIYDIDNSNITSNYCCNNSFNGISLYGK
SFNNSYTHNFLNYNTNGIYINCQSWGDEIKANTMIHNIQNPDCELGGFESGNGLLFGDAYSAVANNGVYVSYNSFAHNEN
FQAKNNPLQNMITLGPNFFNSDDPENTFVCPLLLAKILRLNAISLPNGIGIQMVEDDTPVKEAGTIAVQVEVDGNMYTAT
LENGKAVIKVDPNVDHQVEIQVGGEHNQEIKKIKQNVISYNKKDDSGNGDSGKDDNMGSDGKPSGSDGDNSGNKTGDSSG
SGDASGESGIANIKNSDEFSQNLGTNSSDYYQKYESLSGKDAMAKGDQSAAKSSDSSGSPSDDGSSKEGKSYELVSPNKI
SKVIQNTSGVIILAIIALLVLLIIGYKRKNKM

Sequences:

>Translated_592_residues
MIEKKYKKLLNLFIICLLGLILISSVYGADELQYSNDDIVMGTTIYDVSSDLSNDDIQSMLDNAGQGDTFNFVSKEYKGI
SLVVDKKVNIISNVNSTVYTSGELSNKAQELNIDKTFGFYFTKNSAGSVLSGFNIVAASSDYGVIVDNSDNTIIRENSIV
DAGNNVLVKNSKNVTLFGNVLNNAKENGLQLKNVSSCYVANNTMMFNGRSGIEIYDIDNSNITSNYCCNNSFNGISLYGK
SFNNSYTHNFLNYNTNGIYINCQSWGDEIKANTMIHNIQNPDCELGGFESGNGLLFGDAYSAVANNGVYVSYNSFAHNEN
FQAKNNPLQNMITLGPNFFNSDDPENTFVCPLLLAKILRLNAISLPNGIGIQMVEDDTPVKEAGTIAVQVEVDGNMYTAT
LENGKAVIKVDPNVDHQVEIQVGGEHNQEIKKIKQNVISYNKKDDSGNGDSGKDDNMGSDGKPSGSDGDNSGNKTGDSSG
SGDASGESGIANIKNSDEFSQNLGTNSSDYYQKYESLSGKDAMAKGDQSAAKSSDSSGSPSDDGSSKEGKSYELVSPNKI
SKVIQNTSGVIILAIIALLVLLIIGYKRKNKM
>Mature_592_residues
MIEKKYKKLLNLFIICLLGLILISSVYGADELQYSNDDIVMGTTIYDVSSDLSNDDIQSMLDNAGQGDTFNFVSKEYKGI
SLVVDKKVNIISNVNSTVYTSGELSNKAQELNIDKTFGFYFTKNSAGSVLSGFNIVAASSDYGVIVDNSDNTIIRENSIV
DAGNNVLVKNSKNVTLFGNVLNNAKENGLQLKNVSSCYVANNTMMFNGRSGIEIYDIDNSNITSNYCCNNSFNGISLYGK
SFNNSYTHNFLNYNTNGIYINCQSWGDEIKANTMIHNIQNPDCELGGFESGNGLLFGDAYSAVANNGVYVSYNSFAHNEN
FQAKNNPLQNMITLGPNFFNSDDPENTFVCPLLLAKILRLNAISLPNGIGIQMVEDDTPVKEAGTIAVQVEVDGNMYTAT
LENGKAVIKVDPNVDHQVEIQVGGEHNQEIKKIKQNVISYNKKDDSGNGDSGKDDNMGSDGKPSGSDGDNSGNKTGDSSG
SGDASGESGIANIKNSDEFSQNLGTNSSDYYQKYESLSGKDAMAKGDQSAAKSSDSSGSPSDDGSSKEGKSYELVSPNKI
SKVIQNTSGVIILAIIALLVLLIIGYKRKNKM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63839; Mature: 63839

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEKKYKKLLNLFIICLLGLILISSVYGADELQYSNDDIVMGTTIYDVSSDLSNDDIQSM
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEEEECCCCCCCHHHHHH
LDNAGQGDTFNFVSKEYKGISLVVDKKVNIISNVNSTVYTSGELSNKAQELNIDKTFGFY
HHCCCCCCEEHHHHHCCCCEEEEEECCEEEECCCCCEEEECCCCCCCHHHCCCEEEEEEE
FTKNSAGSVLSGFNIVAASSDYGVIVDNSDNTIIRENSIVDAGNNVLVKNSKNVTLFGNV
EECCCCCCEECCCEEEEECCCCEEEEECCCCEEEECCCEEECCCCEEEECCCCEEEEHHH
LNNAKENGLQLKNVSSCYVANNTMMFNGRSGIEIYDIDNSNITSNYCCNNSFNGISLYGK
HCCHHHCCEEEECCCEEEEECCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEC
SFNNSYTHNFLNYNTNGIYINCQSWGDEIKANTMIHNIQNPDCELGGFESGNGLLFGDAY
CCCCCCCCCEEEECCCEEEEEECCCCCCHHHCCEEECCCCCCCCCCCCCCCCEEEEECHH
SAVANNGVYVSYNSFAHNENFQAKNNPLQNMITLGPNFFNSDDPENTFVCPLLLAKILRL
HHHHCCCEEEEECCCCCCCCCCCCCCCHHHHEEECCCCCCCCCCCCEEEHHHHHHHHHHH
NAISLPNGIGIQMVEDDTPVKEAGTIAVQVEVDGNMYTATLENGKAVIKVDPNVDHQVEI
CCCCCCCCCEEEEECCCCCCHHCCEEEEEEEECCCEEEEEECCCEEEEEECCCCCEEEEE
QVGGEHNQEIKKIKQNVISYNKKDDSGNGDSGKDDNMGSDGKPSGSDGDNSGNKTGDSSG
EECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SGDASGESGIANIKNSDEFSQNLGTNSSDYYQKYESLSGKDAMAKGDQSAAKSSDSSGSP
CCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCHHHCCCCHHHCCCCCCCCC
SDDGSSKEGKSYELVSPNKISKVIQNTSGVIILAIIALLVLLIIGYKRKNKM
CCCCCCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHCCCC
>Mature Secondary Structure
MIEKKYKKLLNLFIICLLGLILISSVYGADELQYSNDDIVMGTTIYDVSSDLSNDDIQSM
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEEEECCCCCCCHHHHHH
LDNAGQGDTFNFVSKEYKGISLVVDKKVNIISNVNSTVYTSGELSNKAQELNIDKTFGFY
HHCCCCCCEEHHHHHCCCCEEEEEECCEEEECCCCCEEEECCCCCCCHHHCCCEEEEEEE
FTKNSAGSVLSGFNIVAASSDYGVIVDNSDNTIIRENSIVDAGNNVLVKNSKNVTLFGNV
EECCCCCCEECCCEEEEECCCCEEEEECCCCEEEECCCEEECCCCEEEECCCCEEEEHHH
LNNAKENGLQLKNVSSCYVANNTMMFNGRSGIEIYDIDNSNITSNYCCNNSFNGISLYGK
HCCHHHCCEEEECCCEEEEECCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEC
SFNNSYTHNFLNYNTNGIYINCQSWGDEIKANTMIHNIQNPDCELGGFESGNGLLFGDAY
CCCCCCCCCEEEECCCEEEEEECCCCCCHHHCCEEECCCCCCCCCCCCCCCCEEEEECHH
SAVANNGVYVSYNSFAHNENFQAKNNPLQNMITLGPNFFNSDDPENTFVCPLLLAKILRL
HHHHCCCEEEEECCCCCCCCCCCCCCCHHHHEEECCCCCCCCCCCCEEEHHHHHHHHHHH
NAISLPNGIGIQMVEDDTPVKEAGTIAVQVEVDGNMYTATLENGKAVIKVDPNVDHQVEI
CCCCCCCCCEEEEECCCCCCHHCCEEEEEEEECCCEEEEEECCCEEEEEECCCCCEEEEE
QVGGEHNQEIKKIKQNVISYNKKDDSGNGDSGKDDNMGSDGKPSGSDGDNSGNKTGDSSG
EECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SGDASGESGIANIKNSDEFSQNLGTNSSDYYQKYESLSGKDAMAKGDQSAAKSSDSSGSP
CCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCHHHCCCCHHHCCCCCCCCC
SDDGSSKEGKSYELVSPNKISKVIQNTSGVIILAIIALLVLLIIGYKRKNKM
CCCCCCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA