| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is thrC [H]
Identifier: 148642274
GI number: 148642274
Start: 200420
End: 201616
Strand: Reverse
Name: thrC [H]
Synonym: Msm_0214
Alternate gene names: 148642274
Gene position: 201616-200420 (Counterclockwise)
Preceding gene: 148642275
Following gene: 148642273
Centisome position: 10.88
GC content: 36.59
Gene sequence:
>1197_bases ATGATTAGATGTGTTTCATGCGGAGAAGAATATGATAATGATGAGATAATTTACACTTGTGAAAAATGTGGATCTGTTCT CGAACTTGTTAGTGATTTTGATGTTTCTAAAGATATCTTTGACGGCAGAAAAGATACTTTATGGAAATTTAAAGAATGCA TACCTGTTGATGAATCTAAAATTGTTTCACTCAACGAAGGTGGAACTCCATTTTGCAAATGCGACAAATTGGGGGATGAA TTAGGTATCAATTTATATGTTAAAGTTGAAGGGTCAAATCCGACAGGAAGTTTCAAGGACAGGGGAATGACTGTTGGTAT GACCAAAGCTATGGAACTTGGAGTTCATACTGTTGGCTGTGCTTCAACAGGAAATACATCAGCATCTCTTGCAGCATATG CAGCTAGAGCAGGTTTACGTTGTATTGTATTTTTACCTTCCGGAAAAGTAGCTTTAGGAAAATTGGCACAGGCTATGTTC CACGGTGCTGAAGTAATGTCCATTAACGGAAACTTTGATGAAGCACTTGAAGCTATGACTGCTCTTGCATTAGAAAAACA TCTTTACTTATTAAACTCAATTAACCCTTACAGATTAGAAGGTCAAAAAACAATCGGATATGAAATATTAAGGGATTTAG GATGGCAATCTCCAGACAGGATTATTCTGCCTGTTGGAAATGCAGGAAATATTTCAGCTATCTGGAAAGGTGTTAAAGAG TTTTACGAAGCAGGTTTTGTAGATAGTGTACCTATGATGACCGGAATTCAGGCTGAAGGTGCATGTCCAGTTACAAATGC ATTTAAAAAACATGCTGATAGGGTTGTTCCAGTAGAAAATCCGGAAACAATAGCTACTGCAATTCGTATAGGTGCTCCTG TAAGTGACATTAAAGCTTTAAGGGCTATTTATGAGTCTGACGGATATTCTGAAACTGTAAGTGATGAAGAGATATTGGAT GCTCAAAAATTATTAGCTAGAAAAGAGGGAATAGGTGTTGAACCGGCTTCTGCAGCTTCAATTGCAGGTCTTAAAAAATT ATGTGACGAAGGAGTTGTAGATAATGGAGAAACTGTAACCTGTGTTGTTACCGGTCATTTACTTAAAGATCCGAATACTG CAATTGATGCATGTACTAAACCAAAACAAGTGGATGCAGATATTGACACTTTAAGAAAAATTTTAATGAATAAATAG
Upstream 100 bases:
>100_bases TTGAAGTTTATTTAACTGTACCTATTGCAAATTTTATTCTTTCAATTTTTGGTTAAATTTTTATATTGATGATTATTAAA ATAATATGTAGTGATTTTTT
Downstream 100 bases:
>100_bases TTTTATAGCTATTTTTAATCTTTTTTCTCTTTTTTTATTTTTAATTTTATTATAAATACTTTATATTTTCATATTTTCAT CTGATTTTTTATTTTGGTTA
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MIRCVSCGEEYDNDEIIYTCEKCGSVLELVSDFDVSKDIFDGRKDTLWKFKECIPVDESKIVSLNEGGTPFCKCDKLGDE LGINLYVKVEGSNPTGSFKDRGMTVGMTKAMELGVHTVGCASTGNTSASLAAYAARAGLRCIVFLPSGKVALGKLAQAMF HGAEVMSINGNFDEALEAMTALALEKHLYLLNSINPYRLEGQKTIGYEILRDLGWQSPDRIILPVGNAGNISAIWKGVKE FYEAGFVDSVPMMTGIQAEGACPVTNAFKKHADRVVPVENPETIATAIRIGAPVSDIKALRAIYESDGYSETVSDEEILD AQKLLARKEGIGVEPASAASIAGLKKLCDEGVVDNGETVTCVVTGHLLKDPNTAIDACTKPKQVDADIDTLRKILMNK
Sequences:
>Translated_398_residues MIRCVSCGEEYDNDEIIYTCEKCGSVLELVSDFDVSKDIFDGRKDTLWKFKECIPVDESKIVSLNEGGTPFCKCDKLGDE LGINLYVKVEGSNPTGSFKDRGMTVGMTKAMELGVHTVGCASTGNTSASLAAYAARAGLRCIVFLPSGKVALGKLAQAMF HGAEVMSINGNFDEALEAMTALALEKHLYLLNSINPYRLEGQKTIGYEILRDLGWQSPDRIILPVGNAGNISAIWKGVKE FYEAGFVDSVPMMTGIQAEGACPVTNAFKKHADRVVPVENPETIATAIRIGAPVSDIKALRAIYESDGYSETVSDEEILD AQKLLARKEGIGVEPASAASIAGLKKLCDEGVVDNGETVTCVVTGHLLKDPNTAIDACTKPKQVDADIDTLRKILMNK >Mature_398_residues MIRCVSCGEEYDNDEIIYTCEKCGSVLELVSDFDVSKDIFDGRKDTLWKFKECIPVDESKIVSLNEGGTPFCKCDKLGDE LGINLYVKVEGSNPTGSFKDRGMTVGMTKAMELGVHTVGCASTGNTSASLAAYAARAGLRCIVFLPSGKVALGKLAQAMF HGAEVMSINGNFDEALEAMTALALEKHLYLLNSINPYRLEGQKTIGYEILRDLGWQSPDRIILPVGNAGNISAIWKGVKE FYEAGFVDSVPMMTGIQAEGACPVTNAFKKHADRVVPVENPETIATAIRIGAPVSDIKALRAIYESDGYSETVSDEEILD AQKLLARKEGIGVEPASAASIAGLKKLCDEGVVDNGETVTCVVTGHLLKDPNTAIDACTKPKQVDADIDTLRKILMNK
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
Organism=Escherichia coli, GI1790207, Length=304, Percent_Identity=26.9736842105263, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 42832; Mature: 42832
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRCVSCGEEYDNDEIIYTCEKCGSVLELVSDFDVSKDIFDGRKDTLWKFKECIPVDESK CEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHCCCCCCE IVSLNEGGTPFCKCDKLGDELGINLYVKVEGSNPTGSFKDRGMTVGMTKAMELGVHTVGC EEEECCCCCCCEEHHHCCHHCCCEEEEEEECCCCCCCCCCCCEEEEHHHHHHHCCEEEEC ASTGNTSASLAAYAARAGLRCIVFLPSGKVALGKLAQAMFHGAEVMSINGNFDEALEAMT CCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHH ALALEKHLYLLNSINPYRLEGQKTIGYEILRDLGWQSPDRIILPVGNAGNISAIWKGVKE HHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHH FYEAGFVDSVPMMTGIQAEGACPVTNAFKKHADRVVPVENPETIATAIRIGAPVSDIKAL HHHCCCCCCCCHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHH RAIYESDGYSETVSDEEILDAQKLLARKEGIGVEPASAASIAGLKKLCDEGVVDNGETVT HHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEE CVVTGHLLKDPNTAIDACTKPKQVDADIDTLRKILMNK EEEEECEECCCCHHHHHCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MIRCVSCGEEYDNDEIIYTCEKCGSVLELVSDFDVSKDIFDGRKDTLWKFKECIPVDESK CEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHCCCCCCE IVSLNEGGTPFCKCDKLGDELGINLYVKVEGSNPTGSFKDRGMTVGMTKAMELGVHTVGC EEEECCCCCCCEEHHHCCHHCCCEEEEEEECCCCCCCCCCCCEEEEHHHHHHHCCEEEEC ASTGNTSASLAAYAARAGLRCIVFLPSGKVALGKLAQAMFHGAEVMSINGNFDEALEAMT CCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHH ALALEKHLYLLNSINPYRLEGQKTIGYEILRDLGWQSPDRIILPVGNAGNISAIWKGVKE HHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHH FYEAGFVDSVPMMTGIQAEGACPVTNAFKKHADRVVPVENPETIATAIRIGAPVSDIKAL HHHCCCCCCCCHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHH RAIYESDGYSETVSDEEILDAQKLLARKEGIGVEPASAASIAGLKKLCDEGVVDNGETVT HHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEE CVVTGHLLKDPNTAIDACTKPKQVDADIDTLRKILMNK EEEEECEECCCCHHHHHCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]