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The map label for this gene is rpl24e

Identifier: 148642264

GI number: 148642264

Start: 195606

End: 195767

Strand: Reverse

Name: rpl24e

Synonym: Msm_0204

Alternate gene names: 148642264

Gene position: 195767-195606 (Counterclockwise)

Preceding gene: 148642265

Following gene: 148642263

Centisome position: 10.56

GC content: 29.01

Gene sequence:

>162_bases
ATGAGGACTTGTTCATTCTGTAATAAAGAAATAGAAGAAGGTACCGGAAAAATGTATGTTAAAAAAGACGGTTCTATTTA
TTTCTTTTGTAGCAGTAAATGTGAAAAAAACATGATTAAACTTGGTAGAGTTCCAAGAAAAGTTAAATGGGTTAAAGAAT
GA

Upstream 100 bases:

>100_bases
GAAACATTATGGGTCCTGTAAGAGAAGGGGACATTTTAATGTTACTTGATACTATTAGAGAAGCTAAGGAAATTAAAACT
CCTTAAGAAGGTGTAAGAAC

Downstream 100 bases:

>100_bases
TTCAAAAAAGTTTTGTAATGATGAAACCGGACGCAGTTCAAAGACGTCTTATGGGTAAAATATTATCCCGTTTTGAAGAA
AAAGGTCTTCAAATCGTTGC

Product: 50S ribosomal protein L24e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 53; Mature: 53

Protein sequence:

>53_residues
MRTCSFCNKEIEEGTGKMYVKKDGSIYFFCSSKCEKNMIKLGRVPRKVKWVKE

Sequences:

>Translated_53_residues
MRTCSFCNKEIEEGTGKMYVKKDGSIYFFCSSKCEKNMIKLGRVPRKVKWVKE
>Mature_53_residues
MRTCSFCNKEIEEGTGKMYVKKDGSIYFFCSSKCEKNMIKLGRVPRKVKWVKE

Specific function: Binds to the 23S rRNA

COG id: COG2075

COG function: function code J; Ribosomal protein L24E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L24e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL24E_METS3 (A5UJN1)

Other databases:

- EMBL:   CP000678
- RefSeq:   YP_001272777.1
- ProteinModelPortal:   A5UJN1
- SMR:   A5UJN1
- STRING:   A5UJN1
- GeneID:   5216817
- GenomeReviews:   CP000678_GR
- KEGG:   msi:Msm_0204
- eggNOG:   arNOG12662
- HOGENOM:   HBG499845
- OMA:   GTGKMFV
- ProtClustDB:   PRK00807
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00773
- InterPro:   IPR000988
- InterPro:   IPR011017
- Gene3D:   G3DSA:2.30.170.20
- PANTHER:   PTHR10792
- SMART:   SM00746

Pfam domain/function: PF01246 Ribosomal_L24e

EC number: NA

Molecular weight: Translated: 6243; Mature: 6243

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS01073 RIBOSOMAL_L24E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.5 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
13.2 %Cys+Met (Translated Protein)
7.5 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
13.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTCSFCNKEIEEGTGKMYVKKDGSIYFFCSSKCEKNMIKLGRVPRKVKWVKE
CCCCCCCCHHHHCCCCEEEEEECCCEEEEECCCCCCHHHHHCCCCCCEEECCC
>Mature Secondary Structure
MRTCSFCNKEIEEGTGKMYVKKDGSIYFFCSSKCEKNMIKLGRVPRKVKWVKE
CCCCCCCCHHHHCCCCEEEEEECCCEEEEECCCCCCHHHHHCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA