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The map label for this gene is rps24e

Identifier: 148642254

GI number: 148642254

Start: 189070

End: 189378

Strand: Reverse

Name: rps24e

Synonym: Msm_0194

Alternate gene names: 148642254

Gene position: 189378-189070 (Counterclockwise)

Preceding gene: 148642255

Following gene: 148642253

Centisome position: 10.22

GC content: 28.16

Gene sequence:

>309_bases
ATGGAAATTGATATTTTTGAAGATAAGGAAAATAAAGTTTTTAACAGAAGAGAAATAAAATTCTATGTTGAATATGAAGG
AGAAGCTACTCCAAAAATTACCGATATCAAAAGTAAATTAGTAGCTTTATTAAATTCTAAAAAAGAATCTACTGTTGTAG
ATAATGTACAACCTCACTACGGTGAACCTAAAGCATTAGGTTATGCTAAAGTTTACGAAACTGTAGAAGATTTAGAATAC
ATTGAAACTAAAAGTGTAATAGCTAAAAATACTGAAGCTTCTGAAGAAGCTGAAGAAGACGAAGAATAA

Upstream 100 bases:

>100_bases
CAACCAAATGAAGGTTTGGTACTTTTAAAAGTTTGTGATGCTAAAGATTATGCTCAAAATCTTATTGATACCTTTATTAA
AGAATAAAAGAGGGTTAATT

Downstream 100 bases:

>100_bases
GGTGATTCTAATGGTAAAAAAATCTGATCTTTACAAAGTAGACGGAGATAAAATCGAAAGAAAAAACCCAGTTTGTCCTC
GTTGTTCTGACGGTGTATTT

Product: 30S ribosomal protein S24e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MEIDIFEDKENKVFNRREIKFYVEYEGEATPKITDIKSKLVALLNSKKESTVVDNVQPHYGEPKALGYAKVYETVEDLEY
IETKSVIAKNTEASEEAEEDEE

Sequences:

>Translated_102_residues
MEIDIFEDKENKVFNRREIKFYVEYEGEATPKITDIKSKLVALLNSKKESTVVDNVQPHYGEPKALGYAKVYETVEDLEY
IETKSVIAKNTEASEEAEEDEE
>Mature_102_residues
MEIDIFEDKENKVFNRREIKFYVEYEGEATPKITDIKSKLVALLNSKKESTVVDNVQPHYGEPKALGYAKVYETVEDLEY
IETKSVIAKNTEASEEAEEDEE

Specific function: Unknown

COG id: COG2004

COG function: function code J; Ribosomal protein S24E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S24e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS24_METS3 (A5UJM1)

Other databases:

- EMBL:   CP000678
- RefSeq:   YP_001272767.1
- ProteinModelPortal:   A5UJM1
- SMR:   A5UJM1
- STRING:   A5UJM1
- GeneID:   5216299
- GenomeReviews:   CP000678_GR
- KEGG:   msi:Msm_0194
- eggNOG:   arNOG12663
- HOGENOM:   HBG553552
- OMA:   NPMLHRT
- ProtClustDB:   PRK01178
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00545
- InterPro:   IPR012677
- InterPro:   IPR012678
- InterPro:   IPR001976
- InterPro:   IPR018098
- Gene3D:   G3DSA:3.30.70.330
- ProDom:   PD006052

Pfam domain/function: PF01282 Ribosomal_S24e; SSF54189 L23_L15e_core

EC number: NA

Molecular weight: Translated: 11781; Mature: 11781

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: PS00529 RIBOSOMAL_S24E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIDIFEDKENKVFNRREIKFYVEYEGEATPKITDIKSKLVALLNSKKESTVVDNVQPHY
CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCC
GEPKALGYAKVYETVEDLEYIETKSVIAKNTEASEEAEEDEE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MEIDIFEDKENKVFNRREIKFYVEYEGEATPKITDIKSKLVALLNSKKESTVVDNVQPHY
CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCC
GEPKALGYAKVYETVEDLEYIETKSVIAKNTEASEEAEEDEE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA