| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642169
Identifier: 148642169
GI number: 148642169
Start: 103098
End: 103307
Strand: Reverse
Name: 148642169
Synonym: Msm_0109
Alternate gene names: NA
Gene position: 103307-103098 (Counterclockwise)
Preceding gene: 148642170
Following gene: 148642168
Centisome position: 5.57
GC content: 31.9
Gene sequence:
>210_bases ATGGTTAGTCCAATAGTAGCAGCTATTATTTCTTTCTTCTTCCCTGGTATTGGTCAAGTAGTACAAGGTGAAACCCAGAA AGGTATAATAATGTTTGTTGCAGCAATTGTTATTTCAATTATTTTAGCTTACGCATTAGGTACCATTGGTAATATTATTT ACTTAATATATGCTGTATATGCTGCATACGATGCTTATAATATGGGATAA
Upstream 100 bases:
>100_bases CAAAAAGGATTTTGAAAATCAACAAAGTTTTTGAAAGAGTCTATATAACATAATACGATATTTTGTATTGATTTTTTAAT TGAATTATTGAGGGGTATTA
Downstream 100 bases:
>100_bases ATTAATTTTTATCCATTATTTTTTTTTATAAAACTTATTTTTTTTAAAACATAAATTTTGCTGATTTTCACATTAATTAA CAATATTTATTAATCATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MVSPIVAAIISFFFPGIGQVVQGETQKGIIMFVAAIVISIILAYALGTIGNIIYLIYAVYAAYDAYNMG
Sequences:
>Translated_69_residues MVSPIVAAIISFFFPGIGQVVQGETQKGIIMFVAAIVISIILAYALGTIGNIIYLIYAVYAAYDAYNMG >Mature_69_residues MVSPIVAAIISFFFPGIGQVVQGETQKGIIMFVAAIVISIILAYALGTIGNIIYLIYAVYAAYDAYNMG
Specific function: Unknown
COG id: COG2314
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7350; Mature: 7350
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSPIVAAIISFFFPGIGQVVQGETQKGIIMFVAAIVISIILAYALGTIGNIIYLIYAVY CCHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAYDAYNMG HHHHHHCCC >Mature Secondary Structure MVSPIVAAIISFFFPGIGQVVQGETQKGIIMFVAAIVISIILAYALGTIGNIIYLIYAVY CCHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAYDAYNMG HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA