| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642111
Identifier: 148642111
GI number: 148642111
Start: 38119
End: 41187
Strand: Reverse
Name: 148642111
Synonym: Msm_0051
Alternate gene names: NA
Gene position: 41187-38119 (Counterclockwise)
Preceding gene: 148642112
Following gene: 148642110
Centisome position: 2.22
GC content: 28.9
Gene sequence:
>3069_bases ATGCATTCATATAGTTGGATAAATGGCATAATATGGATGCTAAGAATATTCTTATATATAATGGAGAGATTAATTATGAA TAAAAAGATACTTGTTTTTCTTCTTGTTGCTATAGTTGCTCTTTCACTTTCAGCAGTTTCTGCTGCTGATAACACAACTG ATGATGTTAGTGTATTATCATCTTATGATGATAATGCAGTTGTAAGTGAAGCAACTAATGATATATCTATAGATGTTACA GCTAAAGATATTACTTATGGTGAAAATGCAACTGTCGAAGCTAAAATAATTCCAAATACTACTACTGGTAATATTAAATT CAGTTTAGATAATAAAATCAATCAATCTGGAGTTATTGCTAATGGTAGTGCAAGTGTAATTTTTACAAACTTAGAAATTG GTAAACATAGTGTAATTGCAAGTTATAATGGAACTAATTCCACCCCATTTGTATTTAATGTAAATAAAATTTCTGTGTAT AACATGACTATAGATGCACCTGCTGTATTCTATGGAAATAATGTTTCTGCAGTTATAACTTTACCTGAAGATGCAACTGG TGATGTAAATATAACTATTGGCAATAAAACTTACAATGGAAAACTTGTTAGTGGTAAAACTACTATTGCTATACCAAATT TAGCTACAGGAAATACTAATGCTACTGTAGTTTACTTTGGTGATAAAAAATATGCTAATAAAACTATTAACACTACTTTC ACTGTAACTGGTAACACTGTTACAAATGATACCTTTTTCACTTACTTTGGGAAAGATGGTGTTTTAAATAATGATATTAC CTTTTCTGATTTAATATTTGCAGGTAATTTCAGTGGACTTAATTTAAGTACCCTTACTATTGATAAAAAAATCAATTTAA TTGGTGAAAAAGCTATTTTAAAGGATATTTCTCTTGTAATTAAAGCAGATAATATTTCTGTTTCTAATTTTGCCATTGTT TTAACTAACACTAGTGGTGTTGAATCAGCAATTGATGTAAGAGGAGCTAATGCAAATATAAATGCCAACATATTTTCAGT TAATAGTGCTTTTGATAAAAACAGTTTTGTAATTAATGCTGAAAATGCAGTTAATTTAACTATTAACAACAACACTATTG TTTATTCCGGTAAAACTAATGGCAATGGCATTAATAATATTATTAGAATAATTGATTCTGATAATGTGAATATTTTAAAT AATTATATTTTTGCTGAAATCCCTTCAGTTCCTGTAAATTATATGCCTCCTACTTGGGCTGCTACTGTAATGTCTGCAGG TATTTATGTTGAAGGATCTGCTAATTTAAATATAGCTTCAAACAATATTGCTATTGAATATAACAATGCTAGTGGAGCTC ATGATACTATTCATAATTTATACATTGAAGGTGGAAATAATGCAATTATAGAAAACAACAATATAAGTACCAAAGGTCAT ACCTATGTTTACGGTATTACTATTAGTGGTAAAAACTTTACAATAGCATCAAATGCTTTTTACTCTGATTCTGATAACTA TTATGCTGATGGTATTCAAATATATGACAATTCAAATGGTATTTTAAAAGACAATGAAGTGTTTGTTGAATCTCCAGTTG TTGCATATGGTATTTACTCAAGTAATTGGGGTGACAAGGCCAATAACATTACATACAACAACAATAATGTTGTAGGTAAC TCCAGTTACATTTATGGTATTTATGTAAGTGGAAATAATGAAACTTTAATTGGAAACGAAATAACTCTTGTTGGTAACTT TACTACAGGTGTTGCATCTAGTGCAAGTACTGTAACCCTAAATAAAAATGATATTATCACTAATGGTAATAATATAGGTA ATGCAAGCAAATGCGGTGACTCTATCATTGCTGAAACTACCGGTGTTAAAATTGCTTATGGTAATGCAACTGTAACTAAC TGTACTGTTAAAACTACTGGTGAATACACAGTTAATACTACTGGTGCAGGATCTGTAACTTATAATTCTTTAGTTTCAAA TGTTGGTTTAGGAGATAAAACTGTTCAGGCTAATAATAAAACTATTGTAGCAAATAATGGTCCTAAATTCTTAATTGATG TTCCAGAACTTGTTAAAATTTATGGCAGTGCTGATAAACTTATTGCTATTTTGACTGATTCAAGTCATAATCCTATAGCA AATGCTAATATTACATTTAATATTAATGGCAGAAATTATACAAAACTTACTAATGGAACTGGTGTTGCATCTATGGATAT TAATTTAGTATCAGGATCTTACAAAGTAACTGCTACTTATGAAAATACTACTGTAGAATCTAGCATAATTGTAACTCCAA CTATATTAGCTAATGATATTGTTAAATTCTATCGTAATGATACTCATTTTGTTGCAAAATTCACTGACAGCAATGGTACA GCATTAAAAGATAATACTACTGTTAAATTCAATATTAATGGTGTATTCTATAAAGCAAATATTACTAATGGTACTGCTAC ATTACGTATTTGGTTAAACCCTGGAAAATATGTTTTAACTGCATTCAATTCTGTAACAGGTGAAGAATTAGGATTTAATG TTACTGTATTATCAACTGTAATAACTGAAAACTTAGTAAAATACTACAAAAATGAATCACAATTTGTTGTTAAAGTATTA AATGGTGATGGAACACCAGCTAATGGTACAAATGTAACCTTCAATATTAATGGTGTATTCTACACTAAAGAGGTTATTAA TGGTACTGCTACATTAAATATTAATTTATATCCTGGTGATTATATCATTACAACTATGTATGGTAAATATGCAGTTGGAA ATAATGTTACTGTATTGCCAACTTTAATTACAAAAGATTTAGACATGAAATTCCAAGACGGCAGCAATTTCACTGCAAAA ACTTTAGATGGTCAAGGTAAACCATTAGCTAATCAAAACATAACATTTAATGTAAACGGTGTATTCTACAACAGAACAAC TGATGAAAATGGTATGGCTAACTTACTAATTAGATTAAATCCAGGTAAATATATTATCACATCTATCTGGAACGAATACC AAGTTGGAAGAACTATAACAATTGCTTAA
Upstream 100 bases:
>100_bases TCTTTTTAACTTTAATAATGCTGTTATATTGAAGTATAGGCGATATTATTTGTTTTTATCTTCAAAAGGATTATATTGTA TTAGAGCAAATATATATTAC
Downstream 100 bases:
>100_bases GAGATTTTAACTAATCTCTTATCTTTTTCTTTTTTTAGAAACTTTTATTATACTGTTTTATTTAAATAATATTATGGTTA ACATAAGTAAACTCACAGCA
Product: adhesin-like protein
Products: NA
Alternate protein names: Cysteine Protease; Transglutaminase-Like Protein Cysteine Protease; Adhesin-Like Protein With Transglutaminase Domain
Number of amino acids: Translated: 1022; Mature: 1022
Protein sequence:
>1022_residues MHSYSWINGIIWMLRIFLYIMERLIMNKKILVFLLVAIVALSLSAVSAADNTTDDVSVLSSYDDNAVVSEATNDISIDVT AKDITYGENATVEAKIIPNTTTGNIKFSLDNKINQSGVIANGSASVIFTNLEIGKHSVIASYNGTNSTPFVFNVNKISVY NMTIDAPAVFYGNNVSAVITLPEDATGDVNITIGNKTYNGKLVSGKTTIAIPNLATGNTNATVVYFGDKKYANKTINTTF TVTGNTVTNDTFFTYFGKDGVLNNDITFSDLIFAGNFSGLNLSTLTIDKKINLIGEKAILKDISLVIKADNISVSNFAIV LTNTSGVESAIDVRGANANINANIFSVNSAFDKNSFVINAENAVNLTINNNTIVYSGKTNGNGINNIIRIIDSDNVNILN NYIFAEIPSVPVNYMPPTWAATVMSAGIYVEGSANLNIASNNIAIEYNNASGAHDTIHNLYIEGGNNAIIENNNISTKGH TYVYGITISGKNFTIASNAFYSDSDNYYADGIQIYDNSNGILKDNEVFVESPVVAYGIYSSNWGDKANNITYNNNNVVGN SSYIYGIYVSGNNETLIGNEITLVGNFTTGVASSASTVTLNKNDIITNGNNIGNASKCGDSIIAETTGVKIAYGNATVTN CTVKTTGEYTVNTTGAGSVTYNSLVSNVGLGDKTVQANNKTIVANNGPKFLIDVPELVKIYGSADKLIAILTDSSHNPIA NANITFNINGRNYTKLTNGTGVASMDINLVSGSYKVTATYENTTVESSIIVTPTILANDIVKFYRNDTHFVAKFTDSNGT ALKDNTTVKFNINGVFYKANITNGTATLRIWLNPGKYVLTAFNSVTGEELGFNVTVLSTVITENLVKYYKNESQFVVKVL NGDGTPANGTNVTFNINGVFYTKEVINGTATLNINLYPGDYIITTMYGKYAVGNNVTVLPTLITKDLDMKFQDGSNFTAK TLDGQGKPLANQNITFNVNGVFYNRTTDENGMANLLIRLNPGKYIITSIWNEYQVGRTITIA
Sequences:
>Translated_1022_residues MHSYSWINGIIWMLRIFLYIMERLIMNKKILVFLLVAIVALSLSAVSAADNTTDDVSVLSSYDDNAVVSEATNDISIDVT AKDITYGENATVEAKIIPNTTTGNIKFSLDNKINQSGVIANGSASVIFTNLEIGKHSVIASYNGTNSTPFVFNVNKISVY NMTIDAPAVFYGNNVSAVITLPEDATGDVNITIGNKTYNGKLVSGKTTIAIPNLATGNTNATVVYFGDKKYANKTINTTF TVTGNTVTNDTFFTYFGKDGVLNNDITFSDLIFAGNFSGLNLSTLTIDKKINLIGEKAILKDISLVIKADNISVSNFAIV LTNTSGVESAIDVRGANANINANIFSVNSAFDKNSFVINAENAVNLTINNNTIVYSGKTNGNGINNIIRIIDSDNVNILN NYIFAEIPSVPVNYMPPTWAATVMSAGIYVEGSANLNIASNNIAIEYNNASGAHDTIHNLYIEGGNNAIIENNNISTKGH TYVYGITISGKNFTIASNAFYSDSDNYYADGIQIYDNSNGILKDNEVFVESPVVAYGIYSSNWGDKANNITYNNNNVVGN SSYIYGIYVSGNNETLIGNEITLVGNFTTGVASSASTVTLNKNDIITNGNNIGNASKCGDSIIAETTGVKIAYGNATVTN CTVKTTGEYTVNTTGAGSVTYNSLVSNVGLGDKTVQANNKTIVANNGPKFLIDVPELVKIYGSADKLIAILTDSSHNPIA NANITFNINGRNYTKLTNGTGVASMDINLVSGSYKVTATYENTTVESSIIVTPTILANDIVKFYRNDTHFVAKFTDSNGT ALKDNTTVKFNINGVFYKANITNGTATLRIWLNPGKYVLTAFNSVTGEELGFNVTVLSTVITENLVKYYKNESQFVVKVL NGDGTPANGTNVTFNINGVFYTKEVINGTATLNINLYPGDYIITTMYGKYAVGNNVTVLPTLITKDLDMKFQDGSNFTAK TLDGQGKPLANQNITFNVNGVFYNRTTDENGMANLLIRLNPGKYIITSIWNEYQVGRTITIA >Mature_1022_residues MHSYSWINGIIWMLRIFLYIMERLIMNKKILVFLLVAIVALSLSAVSAADNTTDDVSVLSSYDDNAVVSEATNDISIDVT AKDITYGENATVEAKIIPNTTTGNIKFSLDNKINQSGVIANGSASVIFTNLEIGKHSVIASYNGTNSTPFVFNVNKISVY NMTIDAPAVFYGNNVSAVITLPEDATGDVNITIGNKTYNGKLVSGKTTIAIPNLATGNTNATVVYFGDKKYANKTINTTF TVTGNTVTNDTFFTYFGKDGVLNNDITFSDLIFAGNFSGLNLSTLTIDKKINLIGEKAILKDISLVIKADNISVSNFAIV LTNTSGVESAIDVRGANANINANIFSVNSAFDKNSFVINAENAVNLTINNNTIVYSGKTNGNGINNIIRIIDSDNVNILN NYIFAEIPSVPVNYMPPTWAATVMSAGIYVEGSANLNIASNNIAIEYNNASGAHDTIHNLYIEGGNNAIIENNNISTKGH TYVYGITISGKNFTIASNAFYSDSDNYYADGIQIYDNSNGILKDNEVFVESPVVAYGIYSSNWGDKANNITYNNNNVVGN SSYIYGIYVSGNNETLIGNEITLVGNFTTGVASSASTVTLNKNDIITNGNNIGNASKCGDSIIAETTGVKIAYGNATVTN CTVKTTGEYTVNTTGAGSVTYNSLVSNVGLGDKTVQANNKTIVANNGPKFLIDVPELVKIYGSADKLIAILTDSSHNPIA NANITFNINGRNYTKLTNGTGVASMDINLVSGSYKVTATYENTTVESSIIVTPTILANDIVKFYRNDTHFVAKFTDSNGT ALKDNTTVKFNINGVFYKANITNGTATLRIWLNPGKYVLTAFNSVTGEELGFNVTVLSTVITENLVKYYKNESQFVVKVL NGDGTPANGTNVTFNINGVFYTKEVINGTATLNINLYPGDYIITTMYGKYAVGNNVTVLPTLITKDLDMKFQDGSNFTAK TLDGQGKPLANQNITFNVNGVFYNRTTDENGMANLLIRLNPGKYIITSIWNEYQVGRTITIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 109902; Mature: 109902
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSYSWINGIIWMLRIFLYIMERLIMNKKILVFLLVAIVALSLSAVSAADNTTDDVSVLS CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHH SYDDNAVVSEATNDISIDVTAKDITYGENATVEAKIIPNTTTGNIKFSLDNKINQSGVIA CCCCCEEEECCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEE NGSASVIFTNLEIGKHSVIASYNGTNSTPFVFNVNKISVYNMTIDAPAVFYGNNVSAVIT CCCCEEEEEEEECCCEEEEEEECCCCCCCEEEECCEEEEEEEEECCCEEEECCCEEEEEE LPEDATGDVNITIGNKTYNGKLVSGKTTIAIPNLATGNTNATVVYFGDKKYANKTINTTF CCCCCCCEEEEEECCEEECCEEECCCEEEEECCCCCCCCCEEEEEECCCHHCCCEEEEEE TVTGNTVTNDTFFTYFGKDGVLNNDITFSDLIFAGNFSGLNLSTLTIDKKINLIGEKAIL EEECCEEECCEEEEEECCCCEECCCCEEEEEEEECCCCCCEEEEEEEEEEEEEECCHHHH KDISLVIKADNISVSNFAIVLTNTSGVESAIDVRGANANINANIFSVNSAFDKNSFVINA EEEEEEEEECCEEECEEEEEEECCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCEEEEC ENAVNLTINNNTIVYSGKTNGNGINNIIRIIDSDNVNILNNYIFAEIPSVPVNYMPPTWA CCEEEEEECCCEEEEECCCCCCCCCEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCHH ATVMSAGIYVEGSANLNIASNNIAIEYNNASGAHDTIHNLYIEGGNNAIIENNNISTKGH HHHHCCCEEEECCCEEEEECCEEEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCCCC TYVYGITISGKNFTIASNAFYSDSDNYYADGIQIYDNSNGILKDNEVFVESPVVAYGIYS EEEEEEEECCCEEEEEECCEECCCCCEEECCEEEEECCCCEEECCEEEEECCEEEEEEEE SNWGDKANNITYNNNNVVGNSSYIYGIYVSGNNETLIGNEITLVGNFTTGVASSASTVTL CCCCCCCCCEEECCCEEEECCEEEEEEEEECCCCEEECCEEEEEEECCCCCCCCCEEEEE NKNDIITNGNNIGNASKCGDSIIAETTGVKIAYGNATVTNCTVKTTGEYTVNTTGAGSVT CCCEEEECCCCCCCHHHCCCCEEEECCCEEEEECCEEEEEEEEEECCCEEEEECCCCCEE YNSLVSNVGLGDKTVQANNKTIVANNGPKFLIDVPELVKIYGSADKLIAILTDSSHNPIA HHHHHHHCCCCCEEEECCCCEEEECCCCEEEEECHHHHHHHCCCCEEEEEEECCCCCCEE NANITFNINGRNYTKLTNGTGVASMDINLVSGSYKVTATYENTTVESSIIVTPTILANDI CCEEEEEECCCEEEEEECCCEEEEEEEEEEECCEEEEEEECCCEECCEEEEECHHHHHHH VKFYRNDTHFVAKFTDSNGTALKDNTTVKFNINGVFYKANITNGTATLRIWLNPGKYVLT HHHHCCCCEEEEEEECCCCCEEECCCEEEEEEEEEEEEEEECCCEEEEEEEECCCCEEEE AFNSVTGEELGFNVTVLSTVITENLVKYYKNESQFVVKVLNGDGTPANGTNVTFNINGVF EECCCCCHHCCEEEEEHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEEEEE YTKEVINGTATLNINLYPGDYIITTMYGKYAVGNNVTVLPTLITKDLDMKFQDGSNFTAK EEHHHCCCEEEEEEEEECCCEEEEEEECCEEECCCCEEEEEEEECCCCEEEECCCCEEEE TLDGQGKPLANQNITFNVNGVFYNRTTDENGMANLLIRLNPGKYIITSIWNEYQVGRTIT EECCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCEECCEEEE IA EC >Mature Secondary Structure MHSYSWINGIIWMLRIFLYIMERLIMNKKILVFLLVAIVALSLSAVSAADNTTDDVSVLS CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHH SYDDNAVVSEATNDISIDVTAKDITYGENATVEAKIIPNTTTGNIKFSLDNKINQSGVIA CCCCCEEEECCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEE NGSASVIFTNLEIGKHSVIASYNGTNSTPFVFNVNKISVYNMTIDAPAVFYGNNVSAVIT CCCCEEEEEEEECCCEEEEEEECCCCCCCEEEECCEEEEEEEEECCCEEEECCCEEEEEE LPEDATGDVNITIGNKTYNGKLVSGKTTIAIPNLATGNTNATVVYFGDKKYANKTINTTF CCCCCCCEEEEEECCEEECCEEECCCEEEEECCCCCCCCCEEEEEECCCHHCCCEEEEEE TVTGNTVTNDTFFTYFGKDGVLNNDITFSDLIFAGNFSGLNLSTLTIDKKINLIGEKAIL EEECCEEECCEEEEEECCCCEECCCCEEEEEEEECCCCCCEEEEEEEEEEEEEECCHHHH KDISLVIKADNISVSNFAIVLTNTSGVESAIDVRGANANINANIFSVNSAFDKNSFVINA EEEEEEEEECCEEECEEEEEEECCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCEEEEC ENAVNLTINNNTIVYSGKTNGNGINNIIRIIDSDNVNILNNYIFAEIPSVPVNYMPPTWA CCEEEEEECCCEEEEECCCCCCCCCEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCHH ATVMSAGIYVEGSANLNIASNNIAIEYNNASGAHDTIHNLYIEGGNNAIIENNNISTKGH HHHHCCCEEEECCCEEEEECCEEEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCCCC TYVYGITISGKNFTIASNAFYSDSDNYYADGIQIYDNSNGILKDNEVFVESPVVAYGIYS EEEEEEEECCCEEEEEECCEECCCCCEEECCEEEEECCCCEEECCEEEEECCEEEEEEEE SNWGDKANNITYNNNNVVGNSSYIYGIYVSGNNETLIGNEITLVGNFTTGVASSASTVTL CCCCCCCCCEEECCCEEEECCEEEEEEEEECCCCEEECCEEEEEEECCCCCCCCCEEEEE NKNDIITNGNNIGNASKCGDSIIAETTGVKIAYGNATVTNCTVKTTGEYTVNTTGAGSVT CCCEEEECCCCCCCHHHCCCCEEEECCCEEEEECCEEEEEEEEEECCCEEEEECCCCCEE YNSLVSNVGLGDKTVQANNKTIVANNGPKFLIDVPELVKIYGSADKLIAILTDSSHNPIA HHHHHHHCCCCCEEEECCCCEEEECCCCEEEEECHHHHHHHCCCCEEEEEEECCCCCCEE NANITFNINGRNYTKLTNGTGVASMDINLVSGSYKVTATYENTTVESSIIVTPTILANDI CCEEEEEECCCEEEEEECCCEEEEEEEEEEECCEEEEEEECCCEECCEEEEECHHHHHHH VKFYRNDTHFVAKFTDSNGTALKDNTTVKFNINGVFYKANITNGTATLRIWLNPGKYVLT HHHHCCCCEEEEEEECCCCCEEECCCEEEEEEEEEEEEEEECCCEEEEEEEECCCCEEEE AFNSVTGEELGFNVTVLSTVITENLVKYYKNESQFVVKVLNGDGTPANGTNVTFNINGVF EECCCCCHHCCEEEEEHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEEEEE YTKEVINGTATLNINLYPGDYIITTMYGKYAVGNNVTVLPTLITKDLDMKFQDGSNFTAK EEHHHCCCEEEEEEEEECCCEEEEEEECCEEECCCCEEEEEEEECCCCEEEECCCCEEEE TLDGQGKPLANQNITFNVNGVFYNRTTDENGMANLLIRLNPGKYIITSIWNEYQVGRTIT EECCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCEECCEEEE IA EC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA