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The map label for this gene is 148642089

Identifier: 148642089

GI number: 148642089

Start: 22321

End: 22980

Strand: Reverse

Name: 148642089

Synonym: Msm_0029

Alternate gene names: NA

Gene position: 22980-22321 (Counterclockwise)

Preceding gene: 148642090

Following gene: 148642087

Centisome position: 1.24

GC content: 32.27

Gene sequence:

>660_bases
ATGAAAAAAACACATGCTATTCTGGTTGCAGTTATATTTTTAATTTCAGTTTCAGCTGTTTTTGCAGCTGATTCATCTAA
AGAAATCTTTTTAGGAGGAGTTAAATTTAATGTTCCGTCAAATGGGGAGTTTACTCCAGATAATACAGGTTACCATACCG
ACAAATTTGGCATTGATCTGATTCAGGATAACTCATTGCCTGATGAGCAAAATACAATTAAAAATTCAAGCCTCACTAAA
ATGACTCTGTACCACCGTGATGTTTTAGCTATCTATTCAAAATCTTCGGATGATTTTAATGTTTTTTATTTCTCTGCAGG
TGATAAACTTTTTAAAGCAAGCTGTAAAGAAGACAGTGATATTAAGAAACTTCAGGATATAGTTAAAAATTCACCAAATT
CAACACTTACCACTGAGGAATTCTATGCCAGATTAGGTACAAATCCTTATTCTGATACCTTTAATGAACTGGATACGAAT
CATGACGGAAAACTTAGTATTGATGAATTTGAAGAATTAACTGAATATATAATGGAGGATTCATTTTGGGACGGTTATTC
TCCGGAAGAAGTAATCATTTCTGAATTTGAAAGTCTTGATTCAAACCGTGACGGATTTTTATCTTACGATGAATTTTCAG
ATAGATTTGGATTCATTTAG

Upstream 100 bases:

>100_bases
ATTAAATAATGCATCAATTAATTAAACAAATCAGTTTAATTAAAAAATACTAATTTTTATTTACTTTAATGATATATATA
CTCAATAAAGGTGAGATATT

Downstream 100 bases:

>100_bases
TTTTAAAAAATTGGTTCTGCCGGCTATACAACAATTATTGATGCATTTGCATTATTGAATGCATCTTTGTTGTTTTATGT
TCAATTAATAGGATTGCAGA

Product: putative calcium-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKKTHAILVAVIFLISVSAVFAADSSKEIFLGGVKFNVPSNGEFTPDNTGYHTDKFGIDLIQDNSLPDEQNTIKNSSLTK
MTLYHRDVLAIYSKSSDDFNVFYFSAGDKLFKASCKEDSDIKKLQDIVKNSPNSTLTTEEFYARLGTNPYSDTFNELDTN
HDGKLSIDEFEELTEYIMEDSFWDGYSPEEVIISEFESLDSNRDGFLSYDEFSDRFGFI

Sequences:

>Translated_219_residues
MKKTHAILVAVIFLISVSAVFAADSSKEIFLGGVKFNVPSNGEFTPDNTGYHTDKFGIDLIQDNSLPDEQNTIKNSSLTK
MTLYHRDVLAIYSKSSDDFNVFYFSAGDKLFKASCKEDSDIKKLQDIVKNSPNSTLTTEEFYARLGTNPYSDTFNELDTN
HDGKLSIDEFEELTEYIMEDSFWDGYSPEEVIISEFESLDSNRDGFLSYDEFSDRFGFI
>Mature_219_residues
MKKTHAILVAVIFLISVSAVFAADSSKEIFLGGVKFNVPSNGEFTPDNTGYHTDKFGIDLIQDNSLPDEQNTIKNSSLTK
MTLYHRDVLAIYSKSSDDFNVFYFSAGDKLFKASCKEDSDIKKLQDIVKNSPNSTLTTEEFYARLGTNPYSDTFNELDTN
HDGKLSIDEFEELTEYIMEDSFWDGYSPEEVIISEFESLDSNRDGFLSYDEFSDRFGFI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24826; Mature: 24826

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTHAILVAVIFLISVSAVFAADSSKEIFLGGVKFNVPSNGEFTPDNTGYHTDKFGIDL
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEE
IQDNSLPDEQNTIKNSSLTKMTLYHRDVLAIYSKSSDDFNVFYFSAGDKLFKASCKEDSD
EECCCCCCHHHHHCCCCCEEEHHHHHHEEEEEECCCCCEEEEEEECCCHHHHCCCCCCCH
IKKLQDIVKNSPNSTLTTEEFYARLGTNPYSDTFNELDTNHDGKLSIDEFEELTEYIMED
HHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
SFWDGYSPEEVIISEFESLDSNRDGFLSYDEFSDRFGFI
CCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHCCCC
>Mature Secondary Structure
MKKTHAILVAVIFLISVSAVFAADSSKEIFLGGVKFNVPSNGEFTPDNTGYHTDKFGIDL
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEE
IQDNSLPDEQNTIKNSSLTKMTLYHRDVLAIYSKSSDDFNVFYFSAGDKLFKASCKEDSD
EECCCCCCHHHHHCCCCCEEEHHHHHHEEEEEECCCCCEEEEEEECCCHHHHCCCCCCCH
IKKLQDIVKNSPNSTLTTEEFYARLGTNPYSDTFNELDTNHDGKLSIDEFEELTEYIMED
HHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
SFWDGYSPEEVIISEFESLDSNRDGFLSYDEFSDRFGFI
CCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA