Definition Sphingomonas wittichii RW1 chromosome, complete genome.
Accession NC_009511
Length 5,382,261

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 148556907

GI number:

Start: 4399663

End: 4401078

Strand: Reverse

Name: Not Available

Synonym: Swit_4006

Alternate gene names: NA

Gene position: NA

Preceding gene: 148556908

Following gene: 148556906

Centisome position: NA

GC content: NA

Gene sequence:

>1416_bases
GTGAAGCTCCTTCCCGATCTTCGTCGCATGCTGACCCGCACGGAACCCGCCCCGGACGAGGAAACCGACGACGTCTCGCC
CGCCCCCGTCGCGTTCAGCCTTGCCCCCGCCCAGAGCGATCCGGAACTGGAACGCGACCTGCGCCGGCCGATGCGGACCG
GCGGGATCGTCGTCCTCGCCCTGGTCTTCGCCCTGCTGGTCTGGGCCGCGGTCTTCAAGATCTCCGGCGCGGCGATGGCC
ACCGGCGTGGTTAAGGTCGAGAACAACAGCAAGAATCTCAGCCGTCTCGAAAGCGGCGTGGTCCGTCAGATCTTCGTCCG
GGAGGGACAGAAGGTCGCCAAGGGGCAGTTGCTGATCCGCTTCGACGACAGCCAGGCCGGCGCCTCGGTCGACATCTACC
AGAGCGTCGTCGACAGCTCGAACGCGCAGATCGCGCGCTTCCAGGCGGAGGCCGCCGATGCCGCCGCCGTCGCCTATCCG
TCCGAGCTGCGCAGCCGGATGAACGACCCGCGCGTCGCCGCACTGATCCAGGGCCAGGATGCCCTGTTCCAGACCCGGAC
GACGCTCTACCGCAGCCAGGCGCTGGTGCTCGGCTCGCAGGCCCAGCAGCTCGAGACGCAGATCAACGGCCTGAACATCC
AGGCTCAGGCGATCGAGGACCAGAGCAAGCTGATCCGCGAGGAGCTGGATGGCGTCCGCGAACTGGCGCGGCAGGGCTAT
GCCCCGAACAGCCGGCTGCTGGCGCTCGAGCGGAATGCGGTTCAGGTCCGCGGCCAGAAGGGCTCGGTGATGTCCGACGT
CGCCCGGGTCCGGCAGTCGATCGGCCAGATCCGCCTGCAGATCGCCCAGCTCGAGGACCGTCACCAGACCGAGGTCGCCG
ACGGCATCCGCGCCGCACAGGAAAAGCTCGCCGACGCGGTGCCGAAGCTGCGCGCCTCGCAGGTGCTGCGCGACCAGTCC
GAGGTCCGCGCGCCGGTCGCCGGCTATGTGTTCAACCTGACCCAGTTCACCGAGGGCGGTGTCGCCGGGGCCGGGCAGAC
GCTGATGCAGATCGTCCCGACCAACACCGAGCTGATCATCGCGGCCGAGGTTTCCCCGCGCGACATCTCCGATGTCCGCA
AGGGCATGCCGGCGCGGGTGACGCTGCTGGGCTTCAACCCCCGGCTGGTCTCGCCGGTCGACGGCACCGTCTCACTGGTG
TCGGCCGACGCGCGGGTCAACGAAAAGAGCGGCACGAGCTATTTCCTCGTCGAGATCACGGTGCCGGCGGCGAATCTCGC
CAAGGCGGGACCCAATGTCCACCTGACTCCCGGCATGCCGGCCAGCGTGGCGATCGTCACCGGCGAGCGCTCGATCCTCG
ACTATCTGCTCGAACCGTTCACCGACTCCATGCGGACGGCAATGAGAGAAAGATGA

Upstream 100 bases:

>100_bases
TGCGCGGCGGCCGGATCGAACGCTTCGGTCCGCGCGAGGAGGTGATGCGCTCGCTCACGCCCCAGAAGAAGCCGGTCCCG
GCACTGGCGGAGGCCAAGTC

Downstream 100 bases:

>100_bases
GCGGCGACCGCAAGGTCGATTTCCTGGTCGCCGGGGTGCAGAAAGGGGGCACCAGCGCCCTGTTCGACTATCTGCGCGAG
CTGCCCGACATCCAGATGCC

Product: HlyD family type I secretion membrane fusion protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>471_residues
MKLLPDLRRMLTRTEPAPDEETDDVSPAPVAFSLAPAQSDPELERDLRRPMRTGGIVVLALVFALLVWAAVFKISGAAMA
TGVVKVENNSKNLSRLESGVVRQIFVREGQKVAKGQLLIRFDDSQAGASVDIYQSVVDSSNAQIARFQAEAADAAAVAYP
SELRSRMNDPRVAALIQGQDALFQTRTTLYRSQALVLGSQAQQLETQINGLNIQAQAIEDQSKLIREELDGVRELARQGY
APNSRLLALERNAVQVRGQKGSVMSDVARVRQSIGQIRLQIAQLEDRHQTEVADGIRAAQEKLADAVPKLRASQVLRDQS
EVRAPVAGYVFNLTQFTEGGVAGAGQTLMQIVPTNTELIIAAEVSPRDISDVRKGMPARVTLLGFNPRLVSPVDGTVSLV
SADARVNEKSGTSYFLVEITVPAANLAKAGPNVHLTPGMPASVAIVTGERSILDYLLEPFTDSMRTAMRER

Sequences:
NA

Specific function: NA

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA