Definition Sphingomonas wittichii RW1 chromosome, complete genome.
Accession NC_009511
Length 5,382,261

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 148556880

GI number:

Start: 4367562

End: 4369160

Strand: Direct

Name: Not Available

Synonym: Swit_3979

Alternate gene names: NA

Gene position: NA

Preceding gene: 148556879

Following gene: 148556882

Centisome position: NA

GC content: NA

Gene sequence:

>1599_bases
ATGCACGCCTTCTCCCAGCTCCTCGACGGCCTCGTCTACACCCGCTCGCGCAATGCGAAGCTGGCGCTGATCGCCGATTA
TCTGCGCAGGGCGCCCGATCCCGACCGGGGCTGGGCGCTGGCGGCGCTGACCGGCGATCTCGACCTGCCGGCGGTCAAGG
CCTCGGCGATCCAGGCGATCGTCGCCGAACGGGTCGATCCGCTGCTGTTCCTGATGAGCCGCGACTATGTCGGGGACCTC
GCCGAGACGGTCGCGCTGATCTGGCCCAAGCGGATCGACCAGCCCGCCGAGATCGACGACGGCTCGCTCGGCCTCGCGGC
GGTGGTCGATCGGCTGATGCGGCTCGGCCGGGCCGAGGCGCCGGCCGCGCTGAGCGAGATGCTCGACCATCTCGACGCGA
GCGGCCGCTTCGCCCTGCTCAAGCTCGCGACCGGGGGCTTGCGGGTCGGCATCTCGGCGCGGCTCGCCAAGACCGGCTTC
GCCCAGGCCTTCGGCCTCGACGTCGACGCGGTCGAGGAGGTGTGGCACGCGCTGCGGCCCCCCTATGCCGAGCTGTTTGC
CTGGGGGCTGGGCGGCGAACGGCCCGATCCGCGCGGCACGCCCTTCTTCCGGCCGTTCATGCTCGCCCATCCGCTGGAGG
CGGAGACGCTCGACCTCGCCGACTATGCCGCCGAATGGAAATGGGACGGCATCCGCGTCCAGATCGTCGGCACCGGCCAG
GCGGTGCGGCTGTACAGCCGCGCGGGCGACGACATCACCGCGACCTTTCCCGACATCGCCGCGGCCGCGGACGGGATCGA
CGCGGTGCTCGACGGCGAGATGCTGGTGCGGGGCGAAGCGCAGGGCGCGGCCGAGCATGGCGGGTCGGCCGCTTCGTTCA
ACGCCTTGCAGCAGCGGCTCGGGCGCAAGAACGTCTCTTCGAGGATGCTCGCCGACTATCCTGCCTTCGTCCGCCTCTAC
GATCTGCTGATCGACGGCGGCGACGATCTGCGCGCGCTGCCCTGGGAGGCGCGGCGCGCGCGGCTCGAAGCCTTTGCCGC
GCGGCTCGATCCGGCGCGCTTCGATCTGTCGGCGGTGATCGCGGCGCGCGACTTCGACGAGCTCGCCGAGACCCGCGCCG
GCGCCCGCGACGCGGCGATCGAGGGGGTGATGCTCAAGCGCCGCGACAGCCCCTATGTCGCCGGCCGCCGCACCGGCCTC
TGGTACAAGTGGAAGCGCGACCCGCTGACCGTCGACTGCGTGATGATGTACGCCCAGCGCGGCCATGGGAAGCGGTCGAG
CTTCTATTCGGACTATACCTTCGGCTGCTGGTCGGAGGAGGGCGAGCTGCTGCCGGTCGCCAAGGCTTATTCGGGCTTCA
CAGACGAGGAGCTGAAATGGCTCGATGGCTTCGTCCGCAACCACACGGTCAACCGTTTCGGCCCGGTGCGCGAGGTGGAG
AAGCTACTGGTCGTCGAACTGGCCTTCGACAGCATCCACGACAGCCGGCGCCACAAGTCGGGCGTGGCGATGCGCTTCCC
GAGGATCGCCCGCATCCGCCGCGACAAGCCCCCCGGGGAGGCCGACACGATCGAGACGCTGAGGAAGCTGATCGTGTGA

Upstream 100 bases:

>100_bases
CCCGCGCCCTCGCGCTGGTCGGCTATGAGGATGAGGACGAGGGGTGATGGCGGGGTGTCGTCATCGCCCATCCCTCGAAG
GGAGGGAAAAGACCTAGTCG

Downstream 100 bases:

>100_bases
GGGGGAGGGCGGCCCGCGCCTCTCCTGAGACCCCGGCCTCCGCCGGGTGACGATCACAATGGACGGAGCGCTTCAGCGCT
CCGCAAGGCCGAACGGCCGC

Product: ATP-dependent DNA ligase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>532_residues
MHAFSQLLDGLVYTRSRNAKLALIADYLRRAPDPDRGWALAALTGDLDLPAVKASAIQAIVAERVDPLLFLMSRDYVGDL
AETVALIWPKRIDQPAEIDDGSLGLAAVVDRLMRLGRAEAPAALSEMLDHLDASGRFALLKLATGGLRVGISARLAKTGF
AQAFGLDVDAVEEVWHALRPPYAELFAWGLGGERPDPRGTPFFRPFMLAHPLEAETLDLADYAAEWKWDGIRVQIVGTGQ
AVRLYSRAGDDITATFPDIAAAADGIDAVLDGEMLVRGEAQGAAEHGGSAASFNALQQRLGRKNVSSRMLADYPAFVRLY
DLLIDGGDDLRALPWEARRARLEAFAARLDPARFDLSAVIAARDFDELAETRAGARDAAIEGVMLKRRDSPYVAGRRTGL
WYKWKRDPLTVDCVMMYAQRGHGKRSSFYSDYTFGCWSEEGELLPVAKAYSGFTDEELKWLDGFVRNHTVNRFGPVREVE
KLLVVELAFDSIHDSRRHKSGVAMRFPRIARIRRDKPPGEADTIETLRKLIV

Sequences:
NA

Specific function: NA

COG id: COG1793

COG function: function code L; ATP-dependent DNA ligase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA