| Definition | Sphingomonas wittichii RW1 chromosome, complete genome. |
|---|---|
| Accession | NC_009511 |
| Length | 5,382,261 |
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Identifier: 148556369
GI number:
Start: 3805208
End: 3809479
Strand: Reverse
Name: Not Available
Synonym: Swit_3467
Alternate gene names: NA
Gene position: NA
Preceding gene: 148556370
Following gene: 148556368
Centisome position: NA
GC content: NA
Gene sequence:
>4272_bases ATGAACGAACTGACCAATTTCGCCAATCCGGTCGCGAAGCCCGAGACCTTCGACCAGATCCAGATCGGCATCGCCAGCCC GGAGCGCATCCGCAGCTGGTCCTTCGGTGAGATCAAGAAGCCGGAGACGATCAACTACCGCACGTTCAAGCCCGAGCGCG ACGGCCTGTTCTGCGCGCGCATCTTCGGTCCGATCAAGGATTACGAGTGCCTGTGCGGCAAGTACAAGCGCATGAAGTAC AAGGGCATCGTCTGCGAGAAGTGCGGCGTCGAGGTCACCGTCTCGAAGGTCCGCCGCGAGCGGATGGGCCATATCGAGCT GGCCGCCCCGGTCGCGCACATCTGGTTCCTCAAGTCGCTGCCGTCGCGCATCGGCCTGCTGCTCGACATGCAGCTCAAGC AGCTCGAGCGGGTGCTCTACTTCGAGAGCTACATCGTCATCGAGCCGGGCCTGACCCCGCTGGAGAAGTATCAGCTCCTC AACGAGGACGAGCTGCTCGAGGCGCAGGACGAATATGGCGAGGACGCCTTCTCGGCCGGGATCGGCGCCGAGGCGGTCCG CCGCATGCTGGAGGAGCTCGACCTCGAAGGCGAGAAGGAGGACCTCCTCAAGGAGCTCGCCGAGACCAAGTCCGAGCTCA AGCCCAAGAAGATCATCAAGCGGCTCAAGGTCGTCGAGAGCTTCCTGGAGTCGGGCAACCGCCCCGAGTGGATGATCCTC GAGGTGATCCCGGTCATCCCGCCGGATCTCCGCCCGCTCGTGCCGCTCGACGGCGGCCGCTTCGCGACGTCGGACCTCAA CGACCTCTATCGTCGCGTCATCAACCGCAACAACCGCCTCAAGCGGCTGATGGAGCTGCGCGCGCCGGACATCATCGTCC GCAACGAGAAGCGCATGCTGCAGGAGTCGGTCGACGCGCTGTTCGACAACGGCCGCCGCGGCCGGACGATCACGGGCGCC AACAAGCGCCCGCTGAAGTCGCTCAGCGACATGCTGAAGGGCAAGCAGGGCCGCTTCCGCCAGAACCTGCTCGGCAAGCG CGTCGACTATTCGGGCCGCTCGGTGATCGTCACCGGTCCGGAGCTGAAGCTGCACCAGTGCGGCCTGCCGAAGAAGATGG CGCTCGAGCTGTTCAAGCCGTTCATCTACGCCCGGCTCGACGCCAAGGGCCTGTCGATGACGCTCAAGCAGGCCAAGAAG TGGGTCGAGAAGGAGCGCAAGGAGGTCTGGGACATCCTCGACGAGGTGATCCGCGAGCATCCGGTGCTGCTCAACCGCGC GCCGACGCTCCACCGCCTCGGCATCCAGGCGTTCGAGCCGGTGCTGATCGAGGGCAAGGCGATCCAGCTCCACCCGCTGG TCTGCTCAGCCTTCAACGCCGACTTCGACGGTGACCAGATGGCGGTCCACGTGCCGCTGTCGCTGGAGGCGCAGCTCGAA GCGCGCGTCCTGATGATGTCGACCAACAACATCCTGTCGCCCGCGAACGGCAAGCCGATCATCGTCCCGTCGCAGGACAT GGTGCTGGGCCTCTATTATCTGTCGATGCTGAAGGAAGGCGAGCCGGGCGAGGGATCGCTGATCGCGGACATGCAGGAGG TCCACCAGGCGCTGGCCGCCAAGGCGGTGACGCTGCACACCAAGATCATCAGCCGCGTTCCGCAGACCGACGAGGACGGC AACCAGTACATGAAGCGCGTCGAGACGACGCCGGGCCGCATGCTGCTCGGCGAGACGCTGCCGAAGAGCCACAAGGTTCC GTTCGAGACGGTCAACCGCCTGCTGACCAAGAAGGAGATCGGCGACGTCATCGACATCGTCTATCGCCACACCGGCCAGA AGGAGACGGTGCTGTTCGCCGACGCGATCATGGCGCTGGGCTTCCGCCACGCCTTCCAGGCCGGCATCTCGTTCGGCAAG GACGACATGATCATCCCCGAAGCCAAGGAGAAGGAGGTCGAGGAGACCCGTCTGCTGGTGAAGGACTTCGAGCAGCAGTA TCAGGACGGCCTGATCACGCAGCAGGAGAAGTACAACAAGGTGATCGACGCCTGGTCGCGTTGCGGCGACCGCGTGGCGG CCGAGATGATGAAGGAGATCTCGGCGGTCAAGAAGGGCGCCGACGGCCGCGAGAAGCCGATCAACGCGATCTACATGATG GCGCACTCCGGTGCCCGCGGTAGCGCCGCGCAGATCAAGCAGCTCGCCGGCATGCGCGGCCTGATGGCCAAGCCGTCGGG CGAGATCATCGAGACGCCGATCATCTCGAACTTCAAGGAAGGCCTGACCGTCCTCGAGTACTTCAACTCGACCCACGGCG CCCGCAAGGGTCTCGCCGACACCGCGCTCAAGACGGCGAACTCGGGCTACCTGACCCGCCGTCTGGTCGACGTGTCGCAG GACTGCGTCGTCGTCGAGGTCGATTGCGGCACCGACCGCGCGCTCGACATGAAGGCGATCGTCCAGGGCGGCGCCACCAT CGCGTCGCTCGGCGAGCGCATCCTGGGCCGCACCGCGGCCGAGGACATCGTCGATTCGAAGACCAACGAGGTCCTGATCG CCGAGGGCACGCTGCTCGACGAGGCGATGGTCGCGGCGGTCGAGGCGATCGGCATCCAGTCGGTCAAGATCCGCAGCCCG CTGGTCTGCGAATCGAAGGGCGGCGTCTGCGCGGCCTGCTACGGCCGTGACCTCGCCCGCGGCACGCCGGTGAACATCGG CGAAGCGGTCGGCGTCATCGCGGCGCAGTCGATCGGCGAGCCGGGCACCCAGCTGACGATGCGGACCTTCCACATCGGCG GCGCGGCGCAGCTCAACGAGCAGTCGAACCTCGAATCGGTCGCCGACGGCAGCATCGAGTATCGCGAGCTCCGCACGATC ACCGATCCGCGCGGACGCCGCGTCTCGCTGAGCCGCAGCGGCGAGGTGGCGATCATCGACAGCGAGGGCCGCGAGCGCGC GACCCATCGCCTGCCCTATGGCGCGCACCTGCTGCTCGACGACGGCGCAGCCGTCGCCAAGGGCGATCGCATCGCCGAAT GGGACCCCTTCACCATGCCGGTGATCACCGAGACCGGCGGCATCGTGAAGTATCAGGACCTGATCGACAACCAGACGCTC ACCGAGCAGACCGACGAAGCCACCGGCATCAGCCAGAAGGTCGTCATCGAGTACCGCGCCACCAGCCGGAAGGAAGACCT CCGTCCGCGCCTGACGCTGCTCGACGACAGCTCGGGCGAGACCGCGCGCTACATGCTGGCGCCGGGCGCGATGCTCTCGG TCGAGGACGGCCAGGAGGTGAAGGCCGGCGAGGTGCTCGCCCGCGTCAGCCGCGAGTCGGCCAAGACCCGCGACATCACC GGCGGTCTGCCGCGCGTCGCCGAGCTGTTCGAGGCGCGCAAGCCCAAGGAAAACGCGATCATCGCGAAGGTTTCGGGCCG CGTCGAGTTCGGCAAGGACTACAAGGCCAAGCGCAAGATCATCATCCGCCCGGACGATGGTTCGGATGCGGTCGAATATC TGGTGCCGAAGTCGAAGGTCATCGACGTGCAGGAAGGCGACTATGTCAAGCGCGGCGACAACCTGATCGGCGGCTCGCCC GATCCGCACGACATCCTCGAGGTGCTCGGCATCGAGCCGCTCGCCGAATATCTCGTGTCGGAGATCCAGGAGGTCTATCG CCTCCAGGGCGTGAAGATCAACGACAAGCACATCGAGACGATCGTTCGTCAGATGCTGCAGAAGGTCGAGATCACCGACG GCGGCGACACCACCCTGCTCCCCGGCGAGCAGGTGGACCGCGAGGAGATGGACGAGATCAACGCCAAGGCGGATGCCGAG GGCCGTACGATCGCGCAGGGCAAGCCCGTGCTGCTCGGCATCACCAAGGCCTCGCTCCAGACGCGCTCGTTCATCTCGGC CGCGTCGTTCCAGGAGACGACCCGCGTCCTCACCGACGCGTCGGTGCAGGGCAAGGTCGACACGCTGAACGGCCTCAAGG AGAACGTCATCGTCGGCCGCCTGATCCCGGCGGGCACCGGCGCCGGCATGAGCCGCCTGCGCGTCACCGCCAGCAGCCGC GACGCCGCGCTCCGCGCCGCGCAGCGCAACTGGCAGGAGTCGCTGATCGCGCCGCAGACCGCCGCCGAGGAGCATGCCGC CGAGCTGCGCCAGCCGGTCCAGGCCGACACCGGCGACGATCCGCTCGGCGCGGTGGTCGGCGAATCGCACGGCACCGACG CCGATGCGGGCGATTACCTGACCGAGGAGTGA
Upstream 100 bases:
>100_bases GGCCTGGCCGAAGCAGCGGAGTGATCCGGGCAGGCGCCGGTTCCGGCCGGCGCCGCCCCCTCCCCCGCCCGAGAGATCGA CCCTTCAGAGGGACTGAAAA
Downstream 100 bases:
>100_bases TCCTCCCGGGCCGACGGCCGAATCGTCGAACGAGAAAGGCCCCGCCGGAGCGATCCGGCGGGGTTTTTCTTTGGGTGGGC GGTGCCTTTTCCCTGTCTCG
Product: DNA-directed RNA polymerase subunit beta'
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1423_residues MNELTNFANPVAKPETFDQIQIGIASPERIRSWSFGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMKY KGIVCEKCGVEVTVSKVRRERMGHIELAAPVAHIWFLKSLPSRIGLLLDMQLKQLERVLYFESYIVIEPGLTPLEKYQLL NEDELLEAQDEYGEDAFSAGIGAEAVRRMLEELDLEGEKEDLLKELAETKSELKPKKIIKRLKVVESFLESGNRPEWMIL EVIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIVRNEKRMLQESVDALFDNGRRGRTITGA NKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTGPELKLHQCGLPKKMALELFKPFIYARLDAKGLSMTLKQAKK WVEKERKEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLE ARVLMMSTNNILSPANGKPIIVPSQDMVLGLYYLSMLKEGEPGEGSLIADMQEVHQALAAKAVTLHTKIISRVPQTDEDG NQYMKRVETTPGRMLLGETLPKSHKVPFETVNRLLTKKEIGDVIDIVYRHTGQKETVLFADAIMALGFRHAFQAGISFGK DDMIIPEAKEKEVEETRLLVKDFEQQYQDGLITQQEKYNKVIDAWSRCGDRVAAEMMKEISAVKKGADGREKPINAIYMM AHSGARGSAAQIKQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVSQ DCVVVEVDCGTDRALDMKAIVQGGATIASLGERILGRTAAEDIVDSKTNEVLIAEGTLLDEAMVAAVEAIGIQSVKIRSP LVCESKGGVCAACYGRDLARGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNEQSNLESVADGSIEYRELRTI TDPRGRRVSLSRSGEVAIIDSEGRERATHRLPYGAHLLLDDGAAVAKGDRIAEWDPFTMPVITETGGIVKYQDLIDNQTL TEQTDEATGISQKVVIEYRATSRKEDLRPRLTLLDDSSGETARYMLAPGAMLSVEDGQEVKAGEVLARVSRESAKTRDIT GGLPRVAELFEARKPKENAIIAKVSGRVEFGKDYKAKRKIIIRPDDGSDAVEYLVPKSKVIDVQEGDYVKRGDNLIGGSP DPHDILEVLGIEPLAEYLVSEIQEVYRLQGVKINDKHIETIVRQMLQKVEITDGGDTTLLPGEQVDREEMDEINAKADAE GRTIAQGKPVLLGITKASLQTRSFISAASFQETTRVLTDASVQGKVDTLNGLKENVIVGRLIPAGTGAGMSRLRVTASSR DAALRAAQRNWQESLIAPQTAAEEHAAELRQPVQADTGDDPLGAVVGESHGTDADAGDYLTEE
Sequences:
NA
Specific function: NA
COG id: COG0086
COG function: function code K; DNA-directed RNA polymerase, beta' subunit/160 kD subunit
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA