Definition Sphingomonas wittichii RW1 chromosome, complete genome.
Accession NC_009511
Length 5,382,261

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Identifier: 148556048

GI number:

Start: 3458285

End: 3461407

Strand: Reverse

Name: Not Available

Synonym: Swit_3144

Alternate gene names: NA

Gene position: NA

Preceding gene: 148556050

Following gene: 148556047

Centisome position: NA

GC content: NA

Gene sequence:

>3123_bases
ATGACGGTGTGCCAGCGCCCTCATCCCTCCAGGAAGGTTGAGCGTGGGACGCGACATCGGCCCCGCTCACTCCAGAAAAG
GGACTGGAAAGTGATCAATAATTTCAACAAGGTCAGCCGCTTCGGGCTGGGCTGTAGCGCCGTCGCGCTCAGCATCGCTG
CCTTCGCGAGCGCGCCCGCGTTCGCGCAGGGAGCCCCCGCCGCCGAGGAAGAGGGCCAGGTCATCATCGTCACCGGCTCG
CGCATTCCGCAGCCGAACCTGACCAGCGCCGCGCCCGTCACCGTCGTCGGCAGCCAGGAGATCAAGCTGCAGGGCACGAC
CCGCACCGAGGATCTCCTCAACAGCCTGCCGCAGGTGTTCGGCGACCAGGGCGGCAACCTCGCCAATGGCGCGACCGGTA
CCGCCACCGTCAACCTGCGCAACCTCGGGCCGGAGCGCACGCTCGTCCTGATCAACGGCCGCCGCCTGATGCCGGGCGAC
CCGACCTCGTCGGCCGCCGACCTCAACTTCATCCCGGCCGCGCTCGTCAAGAACGTCGAAGTGCTGACCGGCGGCGCCTC
GTCGACCTATGGTTCGGACGCGGTCGCCGGCGTCGTCAACTTCATCATGGACACCGACTTCGAAGGGTTCAAGATCGACG
GCCAGTACAGCCTCTATCAGCACAGCAACAGCAACAGCACCCTCGAGGCTGCCCACGCCGCGCGCGGCTTCCCCTTCCCT
AAGGGCAACACCGTCAACGGCGGCACCGTCGACGTCACGGTCGCCTTCGGCGGCAAGTTCGGCGACGACGACCAGGGCCA
CTTCATGGCCTATGCCGGCTACCGCAAGCTGAAGGCCGTCACGCAGAACAAGTACGACTATTCGTCGTGCGCCTCGCAGG
TCAACGCCGCGGGCGCCGTGAGCTGCGGCGGTTCGGCCACCTCGCCGAACGGCACCTTCTTCGACTGGGCGTCGAACACC
TACCAGATCGGTGCGAACCGCACCTTCCAGCCGGGCTTCACGCCGTACAACTTCGCGCCGCTGAACTATTTCCAGCGTCC
GGACGAGCGCTACACCGCCGGCGTCTTCGCCGACTATGAGATCAGCCCGGCCTTCCATCCGTACATGGAAGCGATGTTCA
TGGACGACCGCACGGTCGCCCAGATCGCGGAATCGGGCAACTTCGGCAACACGCTGAGCGTCAACTGCGACAACCCGCTG
CTCTCGCCGCAGCAGCTCGCGATCGCCTGCGCCCGCGACAATCTGGTGACCCGCCTGACCGAGACCGGCTTCCCGCTGGT
CGACGACGGCAGCGATCCGATGTATCCGAACACCCCGCTGACCTTCTATGATCCGGTCACCGGCAACCCGTACAACCGCG
GCTTCCTCCAGGCGCTGCGCCGCAACGTCGAAGGCGGTCCGCGTCAGGACGATCTCCAGCACACCAGCTTCCGCATCGTC
GGCGGCATGCGCGGCGAGATCAGCCCGGCCTGGTCGTACGACACCTCCTATGTGTTCGGCCGCACCAACTTCTCCGAGAC
CTATCTGAACGAGTTCTCGGCGTCGCGCCTGAACAACGCGATCGACGTCATCATCGACCCGCGCACCGGCCTGCCGGCCT
GCCGCGTGTTCGTGACCGGCGCCGACACCAACTGCCGTCCGTACGACATGTTCTCGCTCGGCGGCGTGACCCAGGACGCG
CTGGGCTATGTCCAGACCCCGGGCTTCCAGCGTGGCAACACGCAGGAGCGGGTGTTCAACGCCAACATCACCGGTACGCT
CGGCGAATATGGCCTGAAGACCCCGTGGGCGGACCAGGGCCTCGGCATCAACGTCGGCGTCGAGTACCGCAAGGAATCGC
TCGAGCTGAAGACCGACGTGGCGTTCCAGACCGGCGATCTCACCGGCCAGGGCGCGGCGACGCTCCCGGTCAAGGGTTCG
TTCGACGTCAAGGAAGTGTTCGGCGAGTTCCAGCTGCCGATCGTCCAGGACGGCTTCATCAAGGACCTGTCGATCGAAGG
CGGCTACCGCTATTCGCACTACAACACCGGCATCAACACCGACACGTACAAGCTCGCCCTGACGTTCCAGCCGGTTTCGG
ACCTGAAGTTCCGCGCCAGCTATAATCGCGCGGTCCGCGCGCCGAACGTCCAGGACCTGTTCGCACCGGTTCGCGTCGCC
CTCAACGGCAACAGCGATCCCTGCGCCGACGGTTCGGCCACGGCGGCCGAGTGCGCCCTCACCGGCCTGCCGGTGGGCAA
CTATCCGGTCGCGGGCAACCCGGCGGGCCAGTTCAACGGCCTGATCGGCGGCAACCCGAACCTGAAGCCGGAGAAGTCGA
CCACGAAGACGATCGGCCTGGTCTTCCAGCCGACCTTCCTCCGCGGCTTCAGCGCGACGATCGACGGCTACGACATCAAG
GTGACCAACAACATCGGCACCTATGGCCAGGACGTGTCGATCCAGCAGTGCATCAACACCGGGGATCCGACCTTCTGCTC
GCTGATCCATCGCGATGCCACCGGCTCGCTGTGGCGTTCGGCCAACGGCTATATCGAGGACCTCAACCGGAACATCGGCA
GCGTCAAGACGCGCGGTGTCGACGTCGGCGTCAACTACTCGACCCGCCTCGGCGCGAACTCGCTGTCGTTCAACCTGCAG
GGTACCTATCTTGACAAGTTCAAGACCGATACCGGCATCCCGGGCGTCGCGGCCTATGACTGCGCCGGTTACTACGGCCT
GGTCTGCGGCACGCCGGCTCCCAAGTGGCGCCACAAGGCCCGCGTGACCTACAACATGGAGAACGGCTTCGGCCTGTCGC
TCGCATGGCGTTACTTCGGCAACGTCAAGCTCGACCGGACCAGCTCGAACACCACGCTGGCCGGCGCTTCGTCGCCGTTC
AACCAGAAGATCAAGGCCGAGAGCTATTTCGATCTCGCCGCGACCTTCAACCTGAACGACTCCTACACCTTCCGTCTGGG
CGTCCAGAACCTGCTCGACAACGATCCGCCGATCATCGGCGCGAACGGCACGTCGTCGGTCATCAACGCCTGCACCGCGG
TGTTCTGTTCGGGCAACACCTTCCCGAACGTGTACGACTCGATGGGTCGCTACATCTACGCCGGCATCACGCTCAACTTC
TAA

Upstream 100 bases:

>100_bases
ATAAATACGACAACACCGCCGCAACGTGTCCCGCCGATGAACCTGCGCTTTACAGCCTGATCGCATTTCTTGCACATCTG
CACCATGCCTTCATGGGCGG

Downstream 100 bases:

>100_bases
TCGTTGGGCTGACGCCAGAGGAGGCGGTGGGGGCAACCCCGCCGCCTCTTTCTTTTGGTGGACATCGATCCCTCCTTTCG
TCCATCTCCAATCCCGTCAT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1040_residues
MTVCQRPHPSRKVERGTRHRPRSLQKRDWKVINNFNKVSRFGLGCSAVALSIAAFASAPAFAQGAPAAEEEGQVIIVTGS
RIPQPNLTSAAPVTVVGSQEIKLQGTTRTEDLLNSLPQVFGDQGGNLANGATGTATVNLRNLGPERTLVLINGRRLMPGD
PTSSAADLNFIPAALVKNVEVLTGGASSTYGSDAVAGVVNFIMDTDFEGFKIDGQYSLYQHSNSNSTLEAAHAARGFPFP
KGNTVNGGTVDVTVAFGGKFGDDDQGHFMAYAGYRKLKAVTQNKYDYSSCASQVNAAGAVSCGGSATSPNGTFFDWASNT
YQIGANRTFQPGFTPYNFAPLNYFQRPDERYTAGVFADYEISPAFHPYMEAMFMDDRTVAQIAESGNFGNTLSVNCDNPL
LSPQQLAIACARDNLVTRLTETGFPLVDDGSDPMYPNTPLTFYDPVTGNPYNRGFLQALRRNVEGGPRQDDLQHTSFRIV
GGMRGEISPAWSYDTSYVFGRTNFSETYLNEFSASRLNNAIDVIIDPRTGLPACRVFVTGADTNCRPYDMFSLGGVTQDA
LGYVQTPGFQRGNTQERVFNANITGTLGEYGLKTPWADQGLGINVGVEYRKESLELKTDVAFQTGDLTGQGAATLPVKGS
FDVKEVFGEFQLPIVQDGFIKDLSIEGGYRYSHYNTGINTDTYKLALTFQPVSDLKFRASYNRAVRAPNVQDLFAPVRVA
LNGNSDPCADGSATAAECALTGLPVGNYPVAGNPAGQFNGLIGGNPNLKPEKSTTKTIGLVFQPTFLRGFSATIDGYDIK
VTNNIGTYGQDVSIQQCINTGDPTFCSLIHRDATGSLWRSANGYIEDLNRNIGSVKTRGVDVGVNYSTRLGANSLSFNLQ
GTYLDKFKTDTGIPGVAAYDCAGYYGLVCGTPAPKWRHKARVTYNMENGFGLSLAWRYFGNVKLDRTSSNTTLAGASSPF
NQKIKAESYFDLAATFNLNDSYTFRLGVQNLLDNDPPIIGANGTSSVINACTAVFCSGNTFPNVYDSMGRYIYAGITLNF

Sequences:
NA

Specific function: NA

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA