Definition Sphingomonas wittichii RW1 chromosome, complete genome.
Accession NC_009511
Length 5,382,261

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 148555593

GI number:

Start: 2962991

End: 2966419

Strand: Direct

Name: Not Available

Synonym: Swit_2681

Alternate gene names: NA

Gene position: NA

Preceding gene: 148555592

Following gene: 148555594

Centisome position: NA

GC content: NA

Gene sequence:

>3429_bases
ATGAGCGGGCGCCTCAAGCCGCTCGATCCGCTGCAGCCGCAGCAGCGCGCCGCCTCCGACCCGCGCGAGCTGGTCTGGCT
GTCGGCCTCGGCCGGCACCGGCAAGACCCACGTCCTCACCGCGCGGGTGCTGCGCCTGCTGCTCGGCGGCGCGGCGCCCG
AGGCGATCCTCTGCCTGACCTTCACCAAGGCGGGCGCGGCCGAGATGGCCGAGCGCATCCACCGCCGCCTCGCCCACTGG
GCGGGGCAGAAAGACGATCTGAAGCTGACCCAGGACCTCACCCGGCTGGGCGAGGATGCCGGGCCCGAGGCGCTGAAGCG
GGCGCGGCAATTGTTCGCGCGGGTGCTGGAGGCACCCGGCGGCGGGCTGCGCATCCAGACGATCCACGCCTTCTGCCAGA
CACTGCTCGCCGGCTTCCCGGCCGAGGCGGGGCTGACCCCCGGCTTCCGCCCGATCGAGGGGCGCGAGGAGGCGGCGCTC
GCCCGCCGCACCCTCGCCGACCTGCTCGACGGCGCGGCGCGCGGCGGCGACCATGGGCTGATCCGCGACGTCCAGGCGCT
CAGCCTGCGGCTCGGCGAGGGCGGCGCCGAGGCCTATCTGCTCGACTGCGCCCGCGCGCCCGACGCGCTGGCCGCGCTCG
GCGCGCGCGGGGCGATCGAGCCCCGGCTGCGCCACGCTTTCGACGTGCCGCTCGGCGATGTCGAGGAGGCGATCGAGGCG
GCCTGCGACGGCCTCGACCTCGCCGCTTTCGAGGCCGTCGCCCGCGCCAACGCGACCTGGGGCACCGCGACCGGGCTGCG
CGACGCCGACACCTTGGCCGCCTTCCTCGCCGCCGGTCCGGCCGCGCGCGCGGCGATGCTGGAGGAGGTGCTGTTCGTCG
TCCTCACCAAAAGCTTCGAGCCGCGCAAATATGCCGCCGGGCTGCTCAAGGCCGACGCCGGCTATCCCGACCAGTGCGTC
CGGCTCGCCGACCAGATCGGCCGGCTGCTCGGCTGGCGCCGCCGCGCCGCGCTCGCCACCGCGATCGGCGCGGGCCTGCG
CGCCGGCCAGGCCTATGCGCAGGCCTATGCCGAGGCGAAGCGCGCCGCCGGGCTGGTCGATTTCGACGACCTGATCCGCG
CCACCGTCCGCCTGCTCGACGAGCCCGGCATGGGCGACTGGGTGCGCTACAAGCTCGACCAGCAGACCGACCATATCCTG
GTCGACGAGGCGCAGGACACCAACGCCGCGCAATGGGCGATCGTCGGCCGGCTCGCCGAGGAATTCTTCGTCGGCGCCGG
CGCGCGCGGCGGGGCGCCGCGCACCATCTTCACGGTCGGCGACTTCAAGCAGGCGATCTTCGGCTTCCAGGGCACCGACC
CGGTCGAGTTCGAGCGCGCCCGGCTGGGCTTCGCGATCAAGGCGCTCCAGGTCGACCGCGAGTTCCTCGACCTGTCGCTC
GACCGCAGCTTCCGCTCGGCGCCCGCCGTGCTCGAACTGGTCGACCGGCTGATCGCCGATCTCGGCCATGAGGAGATGGG
CCTGTTCACGCCGGCCGAGCGCCACGCCGCGCACCATGCGATGCCGGGCCGGGTGACGCTGTGGAAGCCGCTGTCGATCG
AGGAGGCGATGGACGACGACGGCGAGGAGGGCTTCATCGACGACGCCACCCGCGCCTATGCCGGCCGGCTGGCCAGGCAG
GTGCGAAGCTGGATCGACGAGCGGCTGTGGCTGGGGAGCAAGAAGCGCCCGATCCGGCCCGAGGACATCCTGATCCTCGT
CCGCCGCCGCGCCGACCTCGCCTCGCTGATCGTCGCCCGGCTCCATGCCGAGAAGGTGCCGGTGGCGGGCGTCGACCGGC
TGCGGCTGACCGCGCCGCTCGTCGTCAAGGACCTGCTCGCCGCCGTCCGCTTCGCCGTCCAGCGCGAGGACGACCTCAGC
CTCGCCGCGCTGCTCGTCTCGCCGCTGTTCGGCTGGAGCCAGGAGGAACTCTACCGGGTCGGCTTCGGCCGGCGCGGGCC
GCTGGTCGACGCGGTACGGGCCAAGGGCGACGCCGACACCAACGCCGCGCTCGACGCGATCCTCGCCCGCGCCGACTTCA
CCACCCCCTATCGCTTCCTCGAACATCTGCTGACCGGCCCGCTCGATGGGCGCCGCAAGCTGCTGCGCCGGCTCGGCGAC
GAGGCGCGCGACCCGATCGACGAGCTGCTCGGCGCCGCGCTCCAGTTCGAGGGGACGGCGACCGCGACCTTGCAGCGCTT
CCTCGACTGGTTCGATCGCGGCGACGTCGAGATCACCCGCGACCCTTCCGCGCCGCTCGACGCGGTGCGGGTGATGACCG
TCCACGGATCGAAGGGGCTGGAGGCGCCGCTCGTCATCCTCGCCGACGCGACCGCCGATCCCGACCTCAGCCCCGACCGG
CGGCTCGACTGGGCGATCGAGGAAGGCGCCGAGCCAGTGCCGGTGCTGCGCCCGCGCAAGGCCGAGATGGTCGAGGCGCT
GCGCAAGGACGCCGAGGCGCTCGCCAAACGCGAGCGGCAGGAGCATTGGCGGCTGCTCTACGTCGCGCTGACCCGCGCGC
AGGAGCATCTGGTGATCGGCGGCACGCTCGGCGTCCGCGCGCGCGGCGTTCCCCCGGCGTCGAGCTGGTACCAGGCGATC
GACCAGGCGATGGCCGGCCTGGGCTGTCCGCCGGTCGAGGACCCGCTGTGGGTCGAGGCGCGGCATTATCACGGCTCGGT
GGCGGCGACCGGGACGACCGCGCCCGCGCGGCCGAGGCGCGGCGCGCCGGTGCTGGCCGAACCCGGCTGGCTGCGCCGCC
CCGCCCCGCCCGAGGCGCGCCCGCCGCGTCCGCTCGCGCCCTCGTCGCTCGGGCTCGACGATGTGCCCGATCCGCCGCCC
TCGGCCGCGCTGCGCGCCGCCGCCCGGCGCGGCACCCTGCTCCATGCGCTGTTCGAGCGGCTCCCCGCCATCGATCCCGA
TCGCCGCCGCGACGCCGCGCTGCGTTGGCTGCTCGGCTCGGCCGGGGTCGAGGAGGCGGGCATCGCCGGCGCGTTGGCCG
ACGACGCCTGCCGCGTCATCGCCGACCCGCGCTTCGCCGCGATCTTCGGCGCCGACGCGCTCGCCGAGGCGCCGGTCGCG
GCGGTGGTCGCGGGGGAGGTTGTCTCAGGCACGGTCGACCGGTTGCTGGTCGCCGCCGACCGCATCCTCGTCGTCGACTT
CAAGACCGGCCGCCGCGCGCCCGCCGACCTCGCCGCCGTACCCGATCATCATCTGCGCCAGATGAGCGCCTATGCCGCCG
CGCTCGGCGTGATCTTCCCCGGCCGGCCGGTCGCGGCGGCGCTGCTCTACACCGCCGGCCCGACCCTGATCGAGCTGCCC
GCCGCCGTGCTGGACGCGCACAAGCCCGGCTTTAGGGGGCAGGAGCAAAAGCAGGGCCAAGGCCGTTGA

Upstream 100 bases:

>100_bases
CCAAGCTCGCCCCCGAATATTCGCCCTATGCCGATTATGACCAGCTGATGCGGCTCGACGAATGGTATGGCCGGGGCGGC
GGCGAGGCGGAGGGCGGGCG

Downstream 100 bases:

>100_bases
GACTGCCGAAAGGCCCGCTTACATCTGATCCCGTAACCAAGGAGCGTATTCATGCCCACCAAAGCGATCACCGACTCGTC
CTTCCATGACGACGTCATCA

Product: double-strand break repair helicase AddA

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1142_residues
MSGRLKPLDPLQPQQRAASDPRELVWLSASAGTGKTHVLTARVLRLLLGGAAPEAILCLTFTKAGAAEMAERIHRRLAHW
AGQKDDLKLTQDLTRLGEDAGPEALKRARQLFARVLEAPGGGLRIQTIHAFCQTLLAGFPAEAGLTPGFRPIEGREEAAL
ARRTLADLLDGAARGGDHGLIRDVQALSLRLGEGGAEAYLLDCARAPDALAALGARGAIEPRLRHAFDVPLGDVEEAIEA
ACDGLDLAAFEAVARANATWGTATGLRDADTLAAFLAAGPAARAAMLEEVLFVVLTKSFEPRKYAAGLLKADAGYPDQCV
RLADQIGRLLGWRRRAALATAIGAGLRAGQAYAQAYAEAKRAAGLVDFDDLIRATVRLLDEPGMGDWVRYKLDQQTDHIL
VDEAQDTNAAQWAIVGRLAEEFFVGAGARGGAPRTIFTVGDFKQAIFGFQGTDPVEFERARLGFAIKALQVDREFLDLSL
DRSFRSAPAVLELVDRLIADLGHEEMGLFTPAERHAAHHAMPGRVTLWKPLSIEEAMDDDGEEGFIDDATRAYAGRLARQ
VRSWIDERLWLGSKKRPIRPEDILILVRRRADLASLIVARLHAEKVPVAGVDRLRLTAPLVVKDLLAAVRFAVQREDDLS
LAALLVSPLFGWSQEELYRVGFGRRGPLVDAVRAKGDADTNAALDAILARADFTTPYRFLEHLLTGPLDGRRKLLRRLGD
EARDPIDELLGAALQFEGTATATLQRFLDWFDRGDVEITRDPSAPLDAVRVMTVHGSKGLEAPLVILADATADPDLSPDR
RLDWAIEEGAEPVPVLRPRKAEMVEALRKDAEALAKRERQEHWRLLYVALTRAQEHLVIGGTLGVRARGVPPASSWYQAI
DQAMAGLGCPPVEDPLWVEARHYHGSVAATGTTAPARPRRGAPVLAEPGWLRRPAPPEARPPRPLAPSSLGLDDVPDPPP
SAALRAAARRGTLLHALFERLPAIDPDRRRDAALRWLLGSAGVEEAGIAGALADDACRVIADPRFAAIFGADALAEAPVA
AVVAGEVVSGTVDRLLVAADRILVVDFKTGRRAPADLAAVPDHHLRQMSAYAAALGVIFPGRPVAAALLYTAGPTLIELP
AAVLDAHKPGFRGQEQKQGQGR

Sequences:
NA

Specific function: NA

COG id: COG1074

COG function: function code L; ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA